Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY60134 | Canola | plasma membrane | 92.86 | 93.45 |
| Bra015973.1-P | Field mustard | plasma membrane | 92.86 | 93.45 |
| CDX68215 | Canola | plasma membrane | 67.23 | 92.49 |
| CDX73002 | Canola | plasma membrane | 77.31 | 92.0 |
| Bra003832.1-P | Field mustard | plasma membrane | 93.07 | 84.22 |
| AT5G52450.1 | Thale cress | plasma membrane | 73.11 | 71.6 |
| AT2G34360.1 | Thale cress | plasma membrane | 67.86 | 67.29 |
| VIT_17s0000g02970.t01 | Wine grape | plasma membrane | 61.97 | 59.84 |
| KRH39120 | Soybean | plasma membrane | 61.13 | 59.51 |
| VIT_17s0000g02990.t01 | Wine grape | plasma membrane | 60.5 | 58.66 |
| KRH41776 | Soybean | cytosol, peroxisome, plasma membrane | 59.66 | 57.03 |
| KRH39118 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 56.3 | 56.54 |
| KRH41780 | Soybean | plasma membrane | 56.09 | 56.21 |
| PGSC0003DMT400014431 | Potato | plasma membrane | 57.98 | 55.76 |
| Solyc03g118970.2.1 | Tomato | plasma membrane | 57.35 | 55.15 |
| KRH39117 | Soybean | golgi, plasma membrane | 50.21 | 53.83 |
| KRH48598 | Soybean | plasma membrane | 51.47 | 52.46 |
| KRH48596 | Soybean | plasma membrane | 51.68 | 52.45 |
| KRH48599 | Soybean | vacuole | 45.17 | 50.95 |
| AT1G15180.1 | Thale cress | plasma membrane | 45.8 | 45.23 |
| AT1G15170.1 | Thale cress | plasma membrane | 45.38 | 44.91 |
| AT1G71140.1 | Thale cress | plasma membrane | 45.17 | 44.33 |
| AT2G04050.1 | Thale cress | plasma membrane | 43.91 | 43.91 |
| AT1G15160.1 | Thale cress | plasma membrane | 44.33 | 43.33 |
| AT1G15150.1 | Thale cress | plasma membrane | 44.12 | 43.12 |
| AT2G04100.1 | Thale cress | plasma membrane | 42.65 | 42.03 |
| AT2G04040.1 | Thale cress | vacuole | 42.02 | 42.02 |
| AT2G04090.1 | Thale cress | plasma membrane | 41.39 | 41.3 |
| AT1G66760.2 | Thale cress | cytosol, peroxisome, plasma membrane | 41.81 | 41.29 |
| AT2G04080.1 | Thale cress | plasma membrane | 40.76 | 40.76 |
| AT1G66780.1 | Thale cress | plasma membrane | 40.55 | 39.79 |
| AT3G23550.1 | Thale cress | plasma membrane | 38.45 | 39.02 |
| AT1G64820.1 | Thale cress | plasma membrane | 40.97 | 38.84 |
| AT3G23560.1 | Thale cress | plasma membrane | 38.03 | 37.95 |
Protein Annotations
| MapMan:24.2.4.1.1 | EntrezGene:843705 | UniProt:A0A178W406 | ProteinID:AAG52084.1 | ProteinID:AEE35499.1 | ArrayExpress:AT1G73700 |
| EnsemblPlantsGene:AT1G73700 | RefSeq:AT1G73700 | TAIR:AT1G73700 | RefSeq:AT1G73700-TAIR-G | EnsemblPlants:AT1G73700.1 | TAIR:AT1G73700.1 |
| EMBL:AY085051 | Unigene:At.34963 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0006855 | GO:GO:0008150 | GO:GO:0015238 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0055085 | InterPro:MATE_fam | RefSeq:NP_177511.1 | ProteinID:OAP12794.1 | PFAM:PF01554 | PO:PO:0000293 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR11206 | PANTHER:PTHR11206:SF198 |
| UniProt:Q9C9U1 | TIGRFAMs:TIGR00797 | TMHMM:TMhelix | UniParc:UPI00000AB40A | SEG:seg | : |
Description
DTX17Protein DETOXIFICATION 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9U1]
Coordinates
chr1:-:27717380..27719741
Molecular Weight (calculated)
51057.2 Da
IEP (calculated)
8.070
GRAVY (calculated)
0.731
Length
476 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDGVTPPLL ITEKDTTMIR VKEEVKKQLW LSAPLIGVSL LQYSLQVISV MFVGHLGSLP LSAASIATSF ASVTGFTFLL GTASALETLC GQAYGAKLYG
101: KLGIQMQRAM FVLLILSVPL SIIWANTEQI LVLVHQDKSI ASVAGSYAKY MIPSLFAYGL LQCINRFLQA QNNVFPVFVC SGITTCLHLL LCWLFVLKTG
201: LGYRGAALAI SVSYWFNVIL LSCYVKFSPS CSHSWTGFSK EAFQELYDFS KIAFPSAVMV CLELWSFELL VLASGLLPNP VLETSVLSIC LNTSLTIWQI
301: SVGLGGAASI RVSNELGAGN PQVAKLAVYV IVGIAVAEGI VVVTVLLSIR KILGHAFSSD PKIIAYAASM IPIVACGNFL DGLQCVLSGV ARGCGWQKIG
401: ACVNLGSYYL VGVPLGLLLG FHFHIGGRGL WLGIVTALSV QVLCLSLVTI FTNWDKEAKK ATNRVGSSDD KDGDVQ
101: KLGIQMQRAM FVLLILSVPL SIIWANTEQI LVLVHQDKSI ASVAGSYAKY MIPSLFAYGL LQCINRFLQA QNNVFPVFVC SGITTCLHLL LCWLFVLKTG
201: LGYRGAALAI SVSYWFNVIL LSCYVKFSPS CSHSWTGFSK EAFQELYDFS KIAFPSAVMV CLELWSFELL VLASGLLPNP VLETSVLSIC LNTSLTIWQI
301: SVGLGGAASI RVSNELGAGN PQVAKLAVYV IVGIAVAEGI VVVTVLLSIR KILGHAFSSD PKIIAYAASM IPIVACGNFL DGLQCVLSGV ARGCGWQKIG
401: ACVNLGSYYL VGVPLGLLLG FHFHIGGRGL WLGIVTALSV QVLCLSLVTI FTNWDKEAKK ATNRVGSSDD KDGDVQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.