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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • nucleus 1
  • vacuole 3
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:nucleus, plasma membrane, vacuole
BaCelLo:nucleus
MultiLoc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra022974.1-P Field mustard vacuole 93.09 98.69
CDX79559 Canola plasma membrane 48.87 97.33
CDX84324 Canola plasma membrane 43.2 86.57
CDY17238 Canola plasma membrane 43.51 82.91
AT2G34360.1 Thale cress plasma membrane 40.93 82.71
CDY00530 Canola plasma membrane 40.1 80.37
CDY54775 Canola plasma membrane 40.0 79.35
CDX91652 Canola plasma membrane 37.42 74.69
CDY27066 Canola plasma membrane 37.42 74.54
CDY68867 Canola plasma membrane 33.81 70.09
CDY60134 Canola plasma membrane 33.51 68.71
CDY49289 Canola plasma membrane 34.74 68.64
CDX72467 Canola plasma membrane 34.23 67.76
CDX73002 Canola plasma membrane 27.73 67.25
CDX68215 Canola plasma membrane 23.09 64.74
VIT_17s0000g02990.t01 Wine grape plasma membrane 32.27 63.75
VIT_17s0000g02970.t01 Wine grape plasma membrane 32.37 63.69
KRH39120 Soybean plasma membrane 31.96 63.39
KRH41776 Soybean cytosol, peroxisome, plasma membrane 31.44 61.24
Solyc03g118970.2.1 Tomato plasma membrane 30.62 60.0
PGSC0003DMT400014431 Potato plasma membrane 30.31 59.39
KRH39118 Soybean endoplasmic reticulum, golgi, plasma membrane 28.25 57.81
KRH41780 Soybean plasma membrane 27.42 56.0
KRH39117 Soybean golgi, plasma membrane 25.46 55.63
KRH48598 Soybean plasma membrane 25.88 53.75
KRH48596 Soybean plasma membrane 25.67 53.09
KRH48599 Soybean vacuole 22.27 51.18
CDY71492 Canola plasma membrane 20.72 46.31
CDX81701 Canola plasma membrane 22.58 45.62
CDY39617 Canola plasma membrane 22.37 45.21
CDY36531 Canola plasma membrane 22.27 45.0
CDY52017 Canola plasma membrane 21.86 44.17
CDY72127 Canola plasma membrane 14.43 44.03
CDX96304 Canola plasma membrane 22.16 43.97
CDY65688 Canola plasma membrane 17.22 43.83
CDX72778 Canola plasma membrane 22.16 43.79
CDX83993 Canola plasma membrane 19.69 43.61
CDY67968 Canola plasma membrane 21.34 42.77
CDX68324 Canola plasma membrane 21.34 42.51
CDY49220 Canola plasma membrane 21.13 42.09
CDY21736 Canola plasma membrane 20.31 41.39
CDY17027 Canola plasma membrane 17.01 41.25
CDY50254 Canola plasma membrane 20.52 41.2
CDY27886 Canola plasma membrane 20.52 41.2
CDX87974 Canola cytosol, peroxisome, plasma membrane 20.0 41.01
CDX81843 Canola plasma membrane 20.1 40.97
CDY15087 Canola plasma membrane 19.9 40.55
CDY12351 Canola cytosol, peroxisome, plasma membrane 20.0 40.25
CDX96130 Canola plasma membrane 19.48 40.04
CDY36231 Canola plasma membrane 18.45 39.34
CDY36229 Canola plasma membrane 19.69 38.66
CDY09031 Canola plasma membrane 18.87 38.53
CDX77471 Canola plasma membrane 15.57 38.23
CDY50255 Canola cytosol, peroxisome, vacuole 9.38 38.08
CDY18116 Canola plasma membrane 18.87 37.97
CDX86801 Canola plasma membrane 19.59 37.92
CDY71754 Canola plasma membrane 10.31 37.88
CDY72452 Canola cytosol, extracellular, mitochondrion 3.61 37.63
CDY13241 Canola plasma membrane 19.59 37.62
CDY18118 Canola plasma membrane 17.42 37.56
CDX96129 Canola plasma membrane 19.48 36.49
CDY36230 Canola plasma membrane 19.28 34.89
CDY18117 Canola cytosol, extracellular, plasma membrane 0.93 25.71
Protein Annotations
Gene3D:1.25.40.10MapMan:16.12.5.4.5MapMan:24.2.4.1.1GO:A0A078D8J6EnsemblPlants:CDX84649ProteinID:CDX84649
ProteinID:CDX84649.1ncoils:CoilInterPro:DYW_domGO:GO:0003674GO:GO:0005215GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0008270
GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00141920001InterPro:IPR002885
InterPro:IPR011990InterPro:MATE_famPFAM:PF01535PFAM:PF01554PFAM:PF14432PFscan:PS51375
PANTHER:PTHR11206PANTHER:PTHR11206:SF198InterPro:Pentatricopeptide_repeatTIGRFAMs:TIGR00756TIGRFAMs:TIGR00797TMHMM:TMhelix
InterPro:TPR-like_helical_dom_sfUniParc:UPI0004EE363ESEG:seg:::
Description
BnaA03g15810D
Coordinates
chrLK031838:-:553302..558649
Molecular Weight (calculated)
107538.0 Da
IEP (calculated)
6.951
GRAVY (calculated)
0.225
Length
970 amino acids
Sequence
(BLAST)
001: MQSERDEMLS WPLIGENEKS SSSGIKVEVK KQLWLAGPLI AVSLLQFCLQ VISVMFVGHL GSLPLSAASV ATSFASVTGF SFLMGTASAL DTVCGQSYGA
101: KMYGMLGIQM QRAMFVLTLY SIPLSIVWAN TEHFLVFFGL DKSIAYLSGS YAKFMIPSIF AYGLLQCINR FLQAQNNVFP VVLCSGVTTC LHVILCWVLV
201: LKSGLGFRGA AVANSISYWL NVILLACYVK SSPSCSLTWT GFSKEALRDI IPFMKLAIPS ALMVCLEMWS FELLVLSSGL LPNPVLETSV LSICLNTSGT
301: IWMIPFGLGG AASTRVSNEL GAGNAKVAKR AVRVVLSIAI LESTLVGSVM ILIRKIWGFA YSSDPKVVTY VASMMPILAI GHLLDSVQSI FSGVARGCGW
401: QKIGAFVNLG SYYFVGVPLG LLLGFHFHLG GRGLWLGIIC ALVIQGASLS VITFFTNWEE EVKKATSRAE GAKDHAAENE PIISVLYFCL LMIPYELFTC
501: DNLLLSRAFT KFISSRCFSS RGQSHDRSRG QSHDLNTKII TSSLRDVFTR PTWQQSQVFV QCRRVSSHAS DDHGSVTVET LDALCEEGRV LEAVKAVQIL
601: KDKDYVVDLP RLLGLAKLCG ETAVLEEAKV VHDFINGLVS TPLDVASHNT ILKMYCDCDS TEDALKVFNE MSERNSETWC VMMRYLAKNG DGELALDMFT
701: RFKEEGSKPD KEMFKAVFFV CASLGDSNEG LLHFESMYKD YGIIPFMEDY VSLTEMLAAC GHLEEALEFV ERMKVEPSVE VWETLMNLCW VHGDVELGDR
801: LAELVKKLDA TRMNNEGLVA EKASDSTKEM MRALKRRLYS KKTGRVHEFK AGDTSKLECS ETVPLLKSLK VHMLEMGFVP WIRLVNIDGA EDEDKEEQLL
901: FRSDKLAFAH SFLNTKPRGR VCVLQSMRIC QDGHETCKML TLITGRELVT RGSKRFHHFK NGVCSCKDYW
Best Arabidopsis Sequence Match ( AT2G34360.1 )
(BLAST)
001: MREEREDMLS WPLIGEKEKR SRFVKEEVEK QLLLSGPLIA VSLLQFCLQI ISVMFVGHLG SLPLSAASIA TSFASVTGFT FLMGTASAMD TVCGQSYGAK
101: MYGMLGIQMQ RAMLVLTLLS VPLSIVWANT EHFLVFFGQD KSIAHLSGSY ARFMIPSIFA YGLLQCLNRF LQAQNNVIPV VICSGVTTSL HVIICWVLVL
201: KSGLGFRGAA VANAISYWLN VILLSCYVKF SPSCSLTWTG FSKEARRDII PFMKLVIPSA FMVCSLEMWS FELLVLSSGL LPNPVLETSC PRTVWMIPFG
301: LSGAASTRVS NELGSGNPKG AKLAVRVVLS FSIVESILVG TVLILIRKIW GFAYSSDPEV VSHVASMLPI LALGHSLDSF QTVLSGVARG CGWQKIGAFV
401: NLGSYYLVGV PFGLLLGFHF HVGGRGLWLG IICALIVQGV CLSLITFFTN WDEEVKKATS RAKSSSEVKE FAVDNGSILV
Arabidopsis Description
DTX15Protein DETOXIFICATION 15 [Source:UniProtKB/Swiss-Prot;Acc:F4IHU9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.