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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plasma membrane, vacuole
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX84324 Canola plasma membrane 86.24 86.78
CDY17238 Canola plasma membrane 87.06 83.3
AT2G34360.1 Thale cress plasma membrane 81.72 82.92
CDY00530 Canola plasma membrane 79.26 79.75
CDY54775 Canola plasma membrane 79.06 78.73
CDX91652 Canola plasma membrane 74.54 74.69
CDY27066 Canola plasma membrane 74.54 74.54
CDY68867 Canola plasma membrane 67.15 69.87
CDY49289 Canola plasma membrane 69.2 68.64
CDY60134 Canola plasma membrane 66.53 68.5
CDX72467 Canola plasma membrane 67.97 67.55
CDX73002 Canola plasma membrane 55.24 67.25
CDX68215 Canola plasma membrane 46.0 64.74
VIT_17s0000g02990.t01 Wine grape plasma membrane 64.27 63.75
KRH39120 Soybean plasma membrane 63.66 63.39
VIT_17s0000g02970.t01 Wine grape plasma membrane 64.07 63.29
KRH41776 Soybean cytosol, peroxisome, plasma membrane 62.42 61.04
Solyc03g118970.2.1 Tomato plasma membrane 60.78 59.8
PGSC0003DMT400014431 Potato plasma membrane 60.16 59.19
KRH39118 Soybean endoplasmic reticulum, golgi, plasma membrane 56.26 57.81
KRH41780 Soybean plasma membrane 54.41 55.79
KRH39117 Soybean golgi, plasma membrane 50.31 55.18
KRH48598 Soybean plasma membrane 51.13 53.32
KRH48596 Soybean plasma membrane 51.33 53.3
KRH48599 Soybean vacuole 44.35 51.18
Bra022974.1-P Field mustard vacuole 92.4 49.18
CDX84649 Canola vacuole 97.33 48.87
CDY71492 Canola plasma membrane 41.68 46.77
CDX81701 Canola plasma membrane 45.38 46.04
CDY39617 Canola plasma membrane 44.97 45.62
CDY36531 Canola plasma membrane 44.76 45.42
CDY52017 Canola plasma membrane 43.94 44.58
CDX96304 Canola plasma membrane 44.15 43.97
CDX83993 Canola plasma membrane 39.43 43.84
CDY65688 Canola plasma membrane 34.29 43.83
CDX72778 Canola plasma membrane 44.15 43.79
CDY72127 Canola plasma membrane 28.54 43.71
CDY67968 Canola plasma membrane 42.71 42.98
CDX68324 Canola plasma membrane 42.71 42.71
CDY49220 Canola plasma membrane 42.3 42.3
CDY21736 Canola plasma membrane 40.86 41.81
CDX87974 Canola cytosol, peroxisome, plasma membrane 40.25 41.44
CDX81843 Canola plasma membrane 40.45 41.39
CDY17027 Canola plasma membrane 33.88 41.25
CDY50254 Canola plasma membrane 40.86 41.2
CDY27886 Canola plasma membrane 40.86 41.2
CDY12351 Canola cytosol, peroxisome, plasma membrane 40.25 40.66
CDY15087 Canola plasma membrane 39.63 40.55
CDX96130 Canola plasma membrane 38.19 39.41
CDY36231 Canola plasma membrane 36.76 39.34
CDY72452 Canola cytosol, extracellular, mitochondrion 7.39 38.71
CDX77471 Canola plasma membrane 31.21 38.48
CDY09031 Canola plasma membrane 37.37 38.32
CDY50255 Canola cytosol, peroxisome, vacuole 18.69 38.08
CDY36229 Canola plasma membrane 38.6 38.06
CDY71754 Canola plasma membrane 20.53 37.88
CDY18118 Canola plasma membrane 34.91 37.78
CDY18116 Canola plasma membrane 37.37 37.76
CDX86801 Canola plasma membrane 38.4 37.33
CDY13241 Canola plasma membrane 38.4 37.03
CDX96129 Canola plasma membrane 38.4 36.1
CDY36230 Canola plasma membrane 37.99 34.51
CDY18117 Canola cytosol, extracellular, plasma membrane 1.85 25.71
Protein Annotations
MapMan:24.2.4.1.1GO:A0A078CU80EnsemblPlants:CDX79559ProteinID:CDX79559ProteinID:CDX79559.1GO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238
GO:GO:0015297GO:GO:0016020GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00132319001InterPro:MATE_famPFAM:PF01554
PANTHER:PTHR11206PANTHER:PTHR11206:SF198TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0004EE0D59SEG:seg
Description
BnaC03g18950D
Coordinates
chrLK031818:+:800755..805647
Molecular Weight (calculated)
52565.1 Da
IEP (calculated)
8.409
GRAVY (calculated)
0.717
Length
487 amino acids
Sequence
(BLAST)
001: MQSERDEVLT LSWPLIGENE KSSSNGIKVE VKKQLWLAGP LIAVSLLQFC LQVISVMFVG HLGSLPLSAA SVATSFASVT GFSFLIGTAS ALDTVCGQSY
101: GGKMYGMLGI QMQRAMFVLT LYSIPLSIVW ANTEHFLVFF GLDKSIAYLS GSYAKFMIPS IFAYGLLQCI NRFLQAQNNV FPVVLCSGVT TCLHVILCWV
201: LVLKSGLGFR GAAVANSISY WLNVILLACY VKFSPSCSLT WTGFSKEALR DIIPFMKLAI PSALMVCLEM WSFELLVLSS GLLPNPVLET SVLSICLNTS
301: GTIWMIPFGL GGAASTRVSN ELGAGNAKVA KRSVRVVLSI AILESTLVGS VMILIRKIWG FAYSSDPKVV TYVASMMPIL AIGHLLDSVQ SVFSGVARGC
401: GWQKIGAFVN LGSYYFVGVP LGLLLGFHFH LGGRGLWLGI ICALVIQGVS LSVITFFTNW EEEVKKATSR AEGAKDHAAE NESIIVF
Best Arabidopsis Sequence Match ( AT2G34360.1 )
(BLAST)
001: MREEREDMLS WPLIGEKEKR SRFVKEEVEK QLLLSGPLIA VSLLQFCLQI ISVMFVGHLG SLPLSAASIA TSFASVTGFT FLMGTASAMD TVCGQSYGAK
101: MYGMLGIQMQ RAMLVLTLLS VPLSIVWANT EHFLVFFGQD KSIAHLSGSY ARFMIPSIFA YGLLQCLNRF LQAQNNVIPV VICSGVTTSL HVIICWVLVL
201: KSGLGFRGAA VANAISYWLN VILLSCYVKF SPSCSLTWTG FSKEARRDII PFMKLVIPSA FMVCSLEMWS FELLVLSSGL LPNPVLETSC PRTVWMIPFG
301: LSGAASTRVS NELGSGNPKG AKLAVRVVLS FSIVESILVG TVLILIRKIW GFAYSSDPEV VSHVASMLPI LALGHSLDSF QTVLSGVARG CGWQKIGAFV
401: NLGSYYLVGV PFGLLLGFHF HVGGRGLWLG IICALIVQGV CLSLITFFTN WDEEVKKATS RAKSSSEVKE FAVDNGSILV
Arabidopsis Description
DTX15Protein DETOXIFICATION 15 [Source:UniProtKB/Swiss-Prot;Acc:F4IHU9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.