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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • nucleus 1
  • vacuole 3
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:nucleus, secretory
BaCelLo:nucleus
MultiLoc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX84649 Canola vacuole 98.69 93.09
CDX79559 Canola plasma membrane 49.18 92.4
Bra005432.1-P Field mustard plasma membrane 44.15 85.77
AT2G34360.1 Thale cress plasma membrane 41.97 80.0
Bra028310.1-P Field mustard plasma membrane 41.42 79.12
Bra028309.1-P Field mustard plasma membrane 41.42 78.31
Bra022594.1-P Field mustard plasma membrane 38.8 72.9
Bra017640.1-P Field mustard plasma membrane 36.07 67.21
Bra015973.1-P Field mustard plasma membrane 34.54 66.81
Bra003832.1-P Field mustard plasma membrane 35.96 62.55
VIT_17s0000g02990.t01 Wine grape plasma membrane 33.55 62.53
VIT_17s0000g02970.t01 Wine grape plasma membrane 33.55 62.27
KRH39120 Soybean plasma membrane 33.11 61.96
KRH41776 Soybean cytosol, peroxisome, plasma membrane 32.68 60.04
Solyc03g118970.2.1 Tomato plasma membrane 31.8 58.79
PGSC0003DMT400014431 Potato plasma membrane 31.48 58.18
KRH39118 Soybean endoplasmic reticulum, golgi, plasma membrane 29.29 56.54
KRH39117 Soybean golgi, plasma membrane 26.78 55.18
KRH41780 Soybean plasma membrane 28.52 54.95
KRH48598 Soybean plasma membrane 26.67 52.25
KRH48596 Soybean plasma membrane 26.78 52.24
KRH48599 Soybean vacuole 23.17 50.24
Bra026160.1-P Field mustard plasma membrane 23.28 44.47
Bra026778.1-P Field mustard plasma membrane 23.28 44.28
Bra016671.1-P Field mustard plasma membrane 23.06 43.78
Bra016158.1-P Field mustard plasma membrane 23.06 43.06
Bra003935.1-P Field mustard plasma membrane 21.53 42.73
Bra007964.1-P Field mustard cytosol, golgi, plasma membrane 22.3 41.3
Bra015133.1-P Field mustard plasma membrane 21.42 40.58
Bra013214.1-P Field mustard plasma membrane 21.09 40.55
Bra015208.1-P Field mustard cytosol, peroxisome, plasma membrane 20.87 39.63
Bra040861.1-P Field mustard plasma membrane 20.22 39.19
Bra004188.1-P Field mustard plasma membrane 19.67 38.88
Bra030999.1-P Field mustard plasma membrane 17.92 38.32
Bra023720.1-P Field mustard plasma membrane 19.67 37.27
Bra035241.1-P Field mustard plasma membrane 20.22 37.0
Bra014999.1-P Field mustard plasma membrane 19.56 31.63
Bra023719.1-P Field mustard plasma membrane 18.14 31.09
Bra015131.1-P Field mustard cytosol 20.87 25.1
Bra004187.1-P Field mustard plasma membrane 20.33 21.09
Protein Annotations
Gene3D:1.25.40.10MapMan:16.12.5.4.5MapMan:24.2.4.1.1EnsemblPlantsGene:Bra022974EnsemblPlants:Bra022974.1EnsemblPlants:Bra022974.1-P
ncoils:CoilInterPro:DYW_domGO:GO:0003674GO:GO:0005215GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0008270GO:GO:0015238
GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:IPR002885InterPro:IPR011990
UniProt:M4E2H3InterPro:MATE_famPFAM:PF01535PFAM:PF01554PFAM:PF14432PFscan:PS51375
PANTHER:PTHR11206PANTHER:PTHR11206:SF198InterPro:Pentatricopeptide_repeatTIGRFAMs:TIGR00756TIGRFAMs:TIGR00797TMHMM:TMhelix
InterPro:TPR-like_helical_dom_sfUniParc:UPI000253FDA9SEG:seg:::
Description
AT2G34360 (E=9e-192) | antiporter/ drug transporter/ transporter
Coordinates
chrA03:+:8034121..8039304
Molecular Weight (calculated)
101740.0 Da
IEP (calculated)
6.935
GRAVY (calculated)
0.211
Length
915 amino acids
Sequence
(BLAST)
001: MQSERDEMLS WPLIGENEKS SSSGIKVEVK KQLWLAGPLI AVSLLQFCLQ VISVMFVGHL GSLPLSAASV ATSFASVTGF SFLMGTASAL DTVCGQSYGA
101: KMYGMLGIQM QRAMFVLTLY SIPLSIVWAN TEHFLVFFGL DKSIAYLSGS YAKFMIPSIF AYGLLQCINR FLQAQNNVFP VVLCSGVTTC LHVILCWVLV
201: LKSGLGFRGA AVANSISYWL NVILLACYVK FSPSCSLTWT GFSKEALRDI IPFMKLAIPS ALMVCLEMWS FELLVLSSGL LPNPVLETSV LSICLNTSGT
301: IWMIPFGLGG AASTRVSNEL GAGNAKVAKR AVRVVLSIAI LESTLVGSVM ILIRKIWGFA YSSDPKVVTY VASMMPILAI GHLLDSVQRV ARGCGWQKIG
401: AFVNLGSYYF VGVPLGLLLG FHFHLGGRGL WLGIICALVI QGASLSVITF FTNWEEEISS RCFNSRGQSH DRSRGQPHDL NTKIITSSLR DVFTRPTWQQ
501: SQIFLQCRRV SSHASDDHGS VTVETLDALC EEGRVLEAVK AVQILKDKDY VVDLPRLLGL AKLCGETAVL EEAKVVHDFI NGLVSTPLDV ASHNTILKMY
601: CDCDSTEDAL KVFNEMSERN SETWCVMMRY LAKNGDGELA LDMFTRFKEE GSKPDKEMFK AVFFVCASLG DSNEGLLHFE SMYKDYGIIP FMEDYVSLTE
701: MLAACGHLEE ALEFVERMKV EPSVEVWETL MNLCWVHGDV ELGDRLAELV KKLDATRMNN EGLVAEKASD SRKEMMRALK RRLYSEKIGR MHEFKAGETS
801: KLECSETVPL LKSLKVHMLE MGFVPWIRLV NIDGAEDEDK EEQLLFRSDK LAFAHSFLNT KPRGRVCVLQ SMRICQDGHE TYKMLTLITG RELVTRGSKR
901: FHHFKNGVCS CKDYW
Best Arabidopsis Sequence Match ( AT2G34360.1 )
(BLAST)
001: MREEREDMLS WPLIGEKEKR SRFVKEEVEK QLLLSGPLIA VSLLQFCLQI ISVMFVGHLG SLPLSAASIA TSFASVTGFT FLMGTASAMD TVCGQSYGAK
101: MYGMLGIQMQ RAMLVLTLLS VPLSIVWANT EHFLVFFGQD KSIAHLSGSY ARFMIPSIFA YGLLQCLNRF LQAQNNVIPV VICSGVTTSL HVIICWVLVL
201: KSGLGFRGAA VANAISYWLN VILLSCYVKF SPSCSLTWTG FSKEARRDII PFMKLVIPSA FMVCSLEMWS FELLVLSSGL LPNPVLETSC PRTVWMIPFG
301: LSGAASTRVS NELGSGNPKG AKLAVRVVLS FSIVESILVG TVLILIRKIW GFAYSSDPEV VSHVASMLPI LALGHSLDSF QTVLSGVARG CGWQKIGAFV
401: NLGSYYLVGV PFGLLLGFHF HVGGRGLWLG IICALIVQGV CLSLITFFTN WDEEVKKATS RAKSSSEVKE FAVDNGSILV
Arabidopsis Description
DTX15Protein DETOXIFICATION 15 [Source:UniProtKB/Swiss-Prot;Acc:F4IHU9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.