Factsheet for Bra023720.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18118	Canola	plasma membrane	92.96	99.78
Bra040861.1-P	Field mustard	plasma membrane	80.75	82.63
AT3G23560.1	Thale cress	plasma membrane	80.33	81.34
AT3G23550.1	Thale cress	plasma membrane	76.81	79.1
Bra023719.1-P	Field mustard	plasma membrane	74.33	67.23
GSMUA_Achr2P13840_001	Banana	plasma membrane	48.86	53.76
TraesCS2D01G142100.1	Wheat	plasma membrane	47.0	52.06
TraesCS1A01G032900.1	Wheat	plasma membrane	50.93	51.14
Os07t0502200-01	Rice	plasma membrane	50.31	50.41
HORVU1Hr1G003490.2	Barley	plasma membrane	49.69	50.21
TraesCS2B01G163300.3	Wheat	cytosol, plasma membrane, vacuole	50.31	50.21
TraesCS6A01G350400.1	Wheat	plasma membrane	50.1	50.1
TraesCS6D01G332800.1	Wheat	cytosol, plasma membrane, vacuole	50.31	50.1
TraesCS2A01G139200.1	Wheat	plasma membrane	49.9	50.0
HORVU0Hr1G039670.1	Barley	plasma membrane	49.69	49.69
TraesCS1D01G034300.1	Wheat	plasma membrane	49.48	49.69
TraesCS6B01G383300.1	Wheat	plasma membrane	49.48	49.48
TraesCS2B01G280500.1	Wheat	plasma membrane	50.1	49.29
TraesCS2A01G261700.1	Wheat	plasma membrane	49.9	49.08
TraesCS2D01G262300.1	Wheat	plasma membrane	49.9	49.08
Zm00001d021569_P001	Maize	plasma membrane	49.07	49.07
Os07t0108200-00	Rice	cytosol, peroxisome, plasma membrane	49.28	48.97
HORVU6Hr1G084080.3	Barley	plasma membrane	49.28	48.97
HORVU2Hr1G063690.5	Barley	cytosol, plasma membrane	49.9	46.44
HORVU0Hr1G002600.4	Barley	golgi	34.78	46.03
GSMUA_Achr4P27830_001	Banana	plasma membrane	52.17	45.16
Zm00001d018638_P001	Maize	cytosol, peroxisome, plasma membrane	46.58	45.0
OQU88303	Sorghum	cytosol, peroxisome, plasma membrane	46.58	44.47
EER99421	Sorghum	plasma membrane	49.48	40.37
Bra028310.1-P	Field mustard	plasma membrane	38.92	39.25
Bra005432.1-P	Field mustard	plasma membrane	38.1	39.07
Bra022594.1-P	Field mustard	plasma membrane	39.34	39.01
Bra015973.1-P	Field mustard	plasma membrane	38.1	38.9
Bra028309.1-P	Field mustard	plasma membrane	38.92	38.84
Bra017640.1-P	Field mustard	plasma membrane	39.13	38.49
Bra016671.1-P	Field mustard	plasma membrane	36.85	36.93
Bra026160.1-P	Field mustard	plasma membrane	35.61	35.91
Bra015133.1-P	Field mustard	plasma membrane	35.61	35.61
Bra003832.1-P	Field mustard	plasma membrane	38.72	35.55
Bra026778.1-P	Field mustard	plasma membrane	34.78	34.93
Bra004188.1-P	Field mustard	plasma membrane	32.71	34.13
Bra013214.1-P	Field mustard	plasma membrane	33.54	34.03
Bra016158.1-P	Field mustard	plasma membrane	33.13	32.65
Bra007964.1-P	Field mustard	cytosol, golgi, plasma membrane	33.13	32.39
Bra015208.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.3	32.37
Bra003935.1-P	Field mustard	plasma membrane	30.85	32.32
Bra030999.1-P	Field mustard	plasma membrane	28.57	32.24
Bra035241.1-P	Field mustard	plasma membrane	32.51	31.4
Bra014999.1-P	Field mustard	plasma membrane	27.33	23.32
Bra015131.1-P	Field mustard	cytosol	33.33	21.16
Bra022974.1-P	Field mustard	vacuole	37.27	19.67
Bra004187.1-P	Field mustard	plasma membrane	32.51	17.8

Protein Annotations

MapMan:24.2.4.1.1	EnsemblPlantsGene:Bra023720	EnsemblPlants:Bra023720.1	EnsemblPlants:Bra023720.1-P	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	UniProt:M4E4L7	InterPro:MATE_fam	PFAM:PF01554
PANTHER:PTHR11206	PANTHER:PTHR11206:SF78	TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI0002543D7F	SEG:seg

Description

AT3G23560 (E=3e-213) ALF5 | ALF5 (ABERRANT LATERAL ROOT FORMATION 5); antiporter/ drug transporter/ transporter

Coordinates

chrA01:+:19311915..19316667

Molecular Weight (calculated)

52485.2 Da

IEP (calculated)

8.233

GRAVY (calculated)

0.717

Length

483 amino acids

Sequence
(BLAST)

001: MLHQEDSVTD PPITKSPQLL DDHEDGGDDG ERIRSSWVQK VINLEESKAQ IIYALPVIFT NLFIYCIPLT SVMFASHLGQ LELAGATLAN SWATVTGVTF
101: MIGLSGALET LCGQGFGAKN YRMLGLHLQS SCIVSLVFAI FISIFWFYTE SVLRLVGQDP NISKQAALYM KYQAPGLLAC GFLQNILRFC QTQSIVTPLV
201: IFSIVPLVIN IGIAYVLVYI AGLGFIGASI ATSISTWIAF LSLGTYVICS VKFKETWTGF SLESFRYVII NLKLSLPSVA MVCLEYWAFE ILVLLAGLMP
301: NPEITTSLVA ICVNTEAVSY MLTCGLSAAA STRVSNELGA GNVKGAKKAT SVTVKLSLVL ALGLVVALLV GHDGWVGLFS SSHVIKKEFT SLRFFLAATI
401: TLDTVQSVLS GVARGCGWQR VVTLINLGTF YLIGMPIAAF CGFKLKLYAK GLWIGMVIGI FCQCSSLLLM TIFRKWKKLD TPV

Best Arabidopsis Sequence Match ( AT3G23560.1 )
(BLAST)

001: MADPATSSPL LDDHVGGEDE RGRRSRSSTL VQKVIDVEEA KAQMIYSLPM ILTNVFYYCI PITSVMFASH LGQLELAGAT LANSWATVSG FAFMVGLSGS
101: LETLCGQGFG AKRYRMLGVH LQSSCIVSLV FSILITIFWF FTESIFGLLR QDPSISKQAA LYMKYQAPGL LAYGFLQNIL RFCQTQSIIA PLVIFSFVPL
201: VINIATAYVL VYVAGLGFIG APIATSISLW IAFLSLGTYV MCSEKFKETW TGFSLESFRY IVINLTLSLP SAAMVCLEYW AFEILVFLAG VMPNPEINTS
301: LVAICVNTEA ISYMLTYGLS AAASTRVSNE LGAGNVKGAK KATSVSVKLS LVLALGVVIV LLVGHDGWVG LFSDSYVIKE EFASLRFFLA ASITLDSIQG
401: VLSGVARGCG WQRLVTVINL ATFYLIGMPI AAFCGFKLKF YAKGLWIGLI CGIFCQSSSL LLMTIFRKWT KLNVATV

Arabidopsis Description

DTX19Protein DETOXIFICATION 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUH2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.