Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G142100.1 | Wheat | plasma membrane | 73.29 | 81.19 |
| Os07t0502200-01 | Rice | plasma membrane | 79.92 | 80.08 |
| TraesCS6B01G383300.1 | Wheat | plasma membrane | 77.23 | 77.23 |
| HORVU0Hr1G039670.1 | Barley | plasma membrane | 77.23 | 77.23 |
| TraesCS6A01G350400.1 | Wheat | plasma membrane | 77.23 | 77.23 |
| TraesCS2A01G139200.1 | Wheat | plasma membrane | 77.02 | 77.18 |
| TraesCS2B01G163300.3 | Wheat | cytosol, plasma membrane, vacuole | 76.4 | 76.24 |
| TraesCS6D01G332800.1 | Wheat | cytosol, plasma membrane, vacuole | 75.98 | 75.67 |
| HORVU6Hr1G084080.3 | Barley | plasma membrane | 75.57 | 75.1 |
| EER99421 | Sorghum | plasma membrane | 89.65 | 73.14 |
| HORVU1Hr1G003490.2 | Barley | plasma membrane | 72.05 | 72.8 |
| HORVU0Hr1G002600.4 | Barley | golgi | 54.87 | 72.6 |
| TraesCS1D01G034300.1 | Wheat | plasma membrane | 72.05 | 72.35 |
| TraesCS1A01G032900.1 | Wheat | plasma membrane | 71.64 | 71.93 |
| GSMUA_Achr2P13840_001 | Banana | plasma membrane | 56.52 | 62.19 |
| Zm00001d018638_P001 | Maize | cytosol, peroxisome, plasma membrane | 59.01 | 57.0 |
| CDY65688 | Canola | plasma membrane | 42.86 | 54.33 |
| GSMUA_Achr4P27830_001 | Banana | plasma membrane | 62.11 | 53.76 |
| VIT_19s0014g02450.t01 | Wine grape | plasma membrane | 53.62 | 53.18 |
| VIT_19s0014g02440.t01 | Wine grape | plasma membrane | 54.04 | 52.94 |
| CDY17027 | Canola | plasma membrane | 43.69 | 52.75 |
| PGSC0003DMT400054780 | Potato | plasma membrane | 40.17 | 51.6 |
| CDY09031 | Canola | plasma membrane | 50.52 | 51.37 |
| CDY18116 | Canola | plasma membrane | 51.14 | 51.24 |
| AT3G23550.1 | Thale cress | plasma membrane | 49.48 | 50.96 |
| AT3G23560.1 | Thale cress | plasma membrane | 50.31 | 50.94 |
| Bra040861.1-P | Field mustard | plasma membrane | 49.69 | 50.85 |
| Solyc10g007100.2.1 | Tomato | plasma membrane | 51.35 | 50.82 |
| PGSC0003DMT400049147 | Potato | plasma membrane | 50.72 | 50.41 |
| KRH22058 | Soybean | plasma membrane | 52.59 | 50.4 |
| KRH22061 | Soybean | cytosol, peroxisome, plasma membrane | 51.14 | 49.4 |
| CDY18118 | Canola | plasma membrane | 45.76 | 49.11 |
| Bra023720.1-P | Field mustard | plasma membrane | 49.07 | 49.07 |
| Solyc10g007360.2.1 | Tomato | plastid | 48.86 | 48.96 |
| KRH27266 | Soybean | plasma membrane | 28.57 | 48.08 |
| Solyc10g007380.1.1 | Tomato | plastid | 47.62 | 44.92 |
| KRH22064 | Soybean | plasma membrane | 48.24 | 43.47 |
| PGSC0003DMT400054764 | Potato | plasma membrane | 47.2 | 43.26 |
| PGSC0003DMT400064458 | Potato | plasma membrane | 36.65 | 43.17 |
| Solyc10g007370.1.1 | Tomato | plasma membrane, plastid | 48.03 | 42.41 |
| Bra023719.1-P | Field mustard | plasma membrane | 45.76 | 41.39 |
| PGSC0003DMT400014996 | Potato | plasma membrane | 36.85 | 40.64 |
| Zm00001d032971_P001 | Maize | cytosol, plasma membrane, vacuole | 32.51 | 38.67 |
| Zm00001d015964_P001 | Maize | cytosol, nucleus, plasma membrane | 38.1 | 38.49 |
| Zm00001d000195_P001 | Maize | plasma membrane | 37.27 | 38.05 |
| Zm00001d043838_P002 | Maize | plasma membrane | 38.3 | 37.99 |
| Zm00001d000196_P001 | Maize | plasma membrane | 36.44 | 37.13 |
| Zm00001d009494_P001 | Maize | plasma membrane | 35.61 | 36.67 |
| Zm00001d027921_P002 | Maize | plasma membrane | 37.06 | 36.09 |
| Zm00001d004055_P001 | Maize | golgi, nucleus, plasma membrane | 36.65 | 35.9 |
| Zm00001d015963_P001 | Maize | plasma membrane | 37.06 | 35.59 |
| Zm00001d036449_P002 | Maize | plasma membrane | 33.75 | 30.3 |
| CDY18117 | Canola | cytosol, extracellular, plasma membrane | 1.66 | 22.86 |
| Zm00001d045948_P002 | Maize | nucleus, plasma membrane, vacuole | 39.34 | 20.23 |
Protein Annotations
| EntrezGene:100281125 | MapMan:24.2.4.1.1 | UniProt:B6SSG0 | EMBL:EU955675 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006855 | GO:GO:0008150 | GO:GO:0015238 | GO:GO:0015297 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:MATE_fam | ProteinID:ONM57537.1 | PFAM:PF01554 |
| PANTHER:PTHR11206 | PANTHER:PTHR11206:SF199 | TIGRFAMs:TIGR00797 | TMHMM:TMhelix | UniParc:UPI000182B208 | EnsemblPlantsGene:Zm00001d021569 |
| EnsemblPlants:Zm00001d021569_P001 | EnsemblPlants:Zm00001d021569_T001 | SEG:seg | : | : | : |
Description
Transparent testa 12 protein
Coordinates
chr7:-:156294946..156300431
Molecular Weight (calculated)
50774.6 Da
IEP (calculated)
7.894
GRAVY (calculated)
0.793
Length
483 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSAAPLLGD EAGGGEPAPR TPPPPSSWVG RVVDAAEARA QLGFAVPMVL TSMAYYGIPL VSVMFSGQLG DVHLAGATLG NSWATVTGYA FVTGLSGALE
101: TLCGQAYGAG LHRMLGLYLQ SSLIMSAAAS ALVSALWWFT EPVLLLLRQE PEASRAAAAF VRAQAPGLFA FSFVQCLLRY LQTQSVVLPL VACSVAPFAL
201: HVALAHLMVN VLGLGLTGAA AAVSATFWVS CLMLLAYVLR SDAFSDTWRG FSADAFKYVL PTVKLATPSA VMVCLEYWAF ELLVLIAGLL PNSTVSTSLI
301: AMCSSTEAIA YMITFGFSAA VSTRVSNEIG AGNVERAKNA VSVTMKLSVL LAVTFVLLLA FGHGLWARLF SGSATIASEF AAITPLMVIS IVLDSVQGVL
401: SGVARGCGWQ HLAAVTNLVA FYIVGMPLAI LFAFKLDLRT RGLWAGLICG LTCQACSLLV ITVRTKWSKL ADAMKEEKAN YVA
101: TLCGQAYGAG LHRMLGLYLQ SSLIMSAAAS ALVSALWWFT EPVLLLLRQE PEASRAAAAF VRAQAPGLFA FSFVQCLLRY LQTQSVVLPL VACSVAPFAL
201: HVALAHLMVN VLGLGLTGAA AAVSATFWVS CLMLLAYVLR SDAFSDTWRG FSADAFKYVL PTVKLATPSA VMVCLEYWAF ELLVLIAGLL PNSTVSTSLI
301: AMCSSTEAIA YMITFGFSAA VSTRVSNEIG AGNVERAKNA VSVTMKLSVL LAVTFVLLLA FGHGLWARLF SGSATIASEF AAITPLMVIS IVLDSVQGVL
401: SGVARGCGWQ HLAAVTNLVA FYIVGMPLAI LFAFKLDLRT RGLWAGLICG LTCQACSLLV ITVRTKWSKL ADAMKEEKAN YVA
001: MADPATSSPL LDDHVGGEDE RGRRSRSSTL VQKVIDVEEA KAQMIYSLPM ILTNVFYYCI PITSVMFASH LGQLELAGAT LANSWATVSG FAFMVGLSGS
101: LETLCGQGFG AKRYRMLGVH LQSSCIVSLV FSILITIFWF FTESIFGLLR QDPSISKQAA LYMKYQAPGL LAYGFLQNIL RFCQTQSIIA PLVIFSFVPL
201: VINIATAYVL VYVAGLGFIG APIATSISLW IAFLSLGTYV MCSEKFKETW TGFSLESFRY IVINLTLSLP SAAMVCLEYW AFEILVFLAG VMPNPEINTS
301: LVAICVNTEA ISYMLTYGLS AAASTRVSNE LGAGNVKGAK KATSVSVKLS LVLALGVVIV LLVGHDGWVG LFSDSYVIKE EFASLRFFLA ASITLDSIQG
401: VLSGVARGCG WQRLVTVINL ATFYLIGMPI AAFCGFKLKF YAKGLWIGLI CGIFCQSSSL LLMTIFRKWT KLNVATV
101: LETLCGQGFG AKRYRMLGVH LQSSCIVSLV FSILITIFWF FTESIFGLLR QDPSISKQAA LYMKYQAPGL LAYGFLQNIL RFCQTQSIIA PLVIFSFVPL
201: VINIATAYVL VYVAGLGFIG APIATSISLW IAFLSLGTYV MCSEKFKETW TGFSLESFRY IVINLTLSLP SAAMVCLEYW AFEILVFLAG VMPNPEINTS
301: LVAICVNTEA ISYMLTYGLS AAASTRVSNE LGAGNVKGAK KATSVSVKLS LVLALGVVIV LLVGHDGWVG LFSDSYVIKE EFASLRFFLA ASITLDSIQG
401: VLSGVARGCG WQRLVTVINL ATFYLIGMPI AAFCGFKLKF YAKGLWIGLI CGIFCQSSSL LLMTIFRKWT KLNVATV
Arabidopsis Description
DTX19Protein DETOXIFICATION 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUH2]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.