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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 4
  • golgi 4
  • plasma membrane 8
  • endoplasmic reticulum 4
  • vacuole 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc10g007360.2.1 Tomato plastid 96.28 75.1
PGSC0003DMT400049147 Potato plasma membrane 79.26 61.32
KRH27266 Soybean plasma membrane 43.62 57.14
PGSC0003DMT400014996 Potato plasma membrane 63.56 54.57
PGSC0003DMT400054764 Potato plasma membrane 72.61 51.8
PGSC0003DMT400064458 Potato plasma membrane 54.52 50.0
VIT_19s0014g02450.t01 Wine grape plasma membrane 64.63 49.9
HORVU0Hr1G002600.4 Barley golgi 47.87 49.32
VIT_19s0014g02440.t01 Wine grape plasma membrane 61.97 47.26
TraesCS2D01G142100.1 Wheat plasma membrane 53.46 46.1
KRH22058 Soybean plasma membrane 61.7 46.03
GSMUA_Achr2P13840_001 Banana plasma membrane 53.72 46.01
KRH22061 Soybean cytosol, peroxisome, plasma membrane 60.11 45.2
TraesCS1A01G032900.1 Wheat plasma membrane 55.05 43.04
AT3G23550.1 Thale cress plasma membrane 53.46 42.86
TraesCS1D01G034300.1 Wheat plasma membrane 54.52 42.62
AT3G23560.1 Thale cress plasma membrane 53.99 42.56
HORVU1Hr1G003490.2 Barley plasma membrane 53.99 42.47
TraesCS2D01G262300.1 Wheat plasma membrane 55.32 42.36
TraesCS2A01G261700.1 Wheat plasma membrane 55.32 42.36
TraesCS2B01G280500.1 Wheat plasma membrane 54.79 41.96
TraesCS2A01G139200.1 Wheat plasma membrane 53.72 41.91
TraesCS6A01G350400.1 Wheat plasma membrane 53.72 41.82
Os07t0108200-00 Rice cytosol, peroxisome, plasma membrane 53.99 41.77
HORVU0Hr1G039670.1 Barley plasma membrane 53.46 41.61
TraesCS2B01G163300.3 Wheat cytosol, plasma membrane, vacuole 53.46 41.53
TraesCS6D01G332800.1 Wheat cytosol, plasma membrane, vacuole 53.19 41.24
TraesCS6B01G383300.1 Wheat plasma membrane 52.93 41.2
HORVU6Hr1G084080.3 Barley plasma membrane 52.93 40.95
Zm00001d021569_P001 Maize plasma membrane 51.6 40.17
HORVU2Hr1G063690.5 Barley cytosol, plasma membrane 55.32 40.08
Os07t0502200-01 Rice plasma membrane 51.06 39.83
GSMUA_Achr4P27830_001 Banana plasma membrane 58.51 39.43
KRH22064 Soybean plasma membrane 54.26 38.06
Zm00001d018638_P001 Maize cytosol, peroxisome, plasma membrane 50.0 37.6
OQU88303 Sorghum cytosol, peroxisome, plasma membrane 50.53 37.55
PGSC0003DMT400078374 Potato plasma membrane 39.36 34.66
Bra023719.1-P Field mustard plasma membrane 47.34 33.33
PGSC0003DMT400014431 Potato plasma membrane 43.62 33.13
EER99421 Sorghum plasma membrane 50.8 32.26
PGSC0003DMT400078371 Potato plasma membrane 38.56 31.94
PGSC0003DMT400078840 Potato golgi, plasma membrane, vacuole 39.36 31.69
PGSC0003DMT400026959 Potato cytosol, plasma membrane, vacuole 40.16 31.46
PGSC0003DMT400078716 Potato extracellular, plasma membrane, vacuole 35.9 31.4
PGSC0003DMT400043016 Potato cytosol, plasma membrane, vacuole 39.1 31.34
PGSC0003DMT400046664 Potato plasma membrane 39.1 31.01
PGSC0003DMT400015301 Potato plasma membrane 39.36 30.64
PGSC0003DMT400065417 Potato plasma membrane 38.56 30.4
PGSC0003DMT400078715 Potato plasma membrane 37.77 29.96
PGSC0003DMT400048259 Potato plasma membrane 37.77 29.77
PGSC0003DMT400070690 Potato endoplasmic reticulum, plasma membrane, vacuole 34.84 28.67
CDY18117 Canola cytosol, extracellular, plasma membrane 2.66 28.57
PGSC0003DMT400070650 Potato plasma membrane 25.27 28.27
PGSC0003DMT400046666 Potato plasma membrane 36.17 27.81
PGSC0003DMT400046656 Potato plasma membrane 34.04 27.47
Protein Annotations
MapMan:24.2.4.1.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855
GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085
UniProt:M1BWV0InterPro:MATE_famPFAM:PF01554EnsemblPlantsGene:PGSC0003DMG400021261PGSC:PGSC0003DMG400021261EnsemblPlants:PGSC0003DMT400054780
PANTHER:PTHR11206PANTHER:PTHR11206:SF78TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0002961791SEG:seg
Description
TRANSPARENT TESTA 12 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400021261]
Coordinates
chr10:-:2451984..2456274
Molecular Weight (calculated)
41216.3 Da
IEP (calculated)
8.028
GRAVY (calculated)
0.844
Length
376 amino acids
Sequence
(BLAST)
001: MYRMLGIHLQ ASCIISFFFS VVISAIWWYS DMILILLHQD PDIAREAGVF LRFLIPGLFA YSFLQNILRS LQAQSIIMPL AFCSVGSLVI HIGISYALVH
101: WTGLAFKGAS LAASISIWIS LLTLGLYVLL SKRFNHIWRD GLSFEPFHHI LTNLKLALPS AAMVCLEYWA FELLVLLAGL MPNSGTTTSV VAMCVNTQNI
201: AYMISYGLSA AASTRVANEL GAGNPDKAKH AMFVTLKLSV LLAIAVDLAL FLGHNVWASL FSDSAEIINK FASMTPLLLI SFVFDFIQGI LSGVTRGCGW
301: QHLAMCINLA TFYFIGMPIA GLLAFTFNLH SQGLWLGLIC GLACQSSGLF LLTLMTRWGK VAEVSTNSNR ENVLLA
Best Arabidopsis Sequence Match ( AT3G23550.1 )
(BLAST)
001: MADPTSKDDH DGEGGRDKSS TFVQKLIDVE EAKTQIIYSL PMIFTNLFYY CIPLTSVMFA SQLGQLELAG ATLANSWATV TGFAFMTGLS GALETLCGQG
101: FGAKSYRMLG IHLQSSCIVS LVFTILITIL WFFTESVFLL LRQDPSISKQ AALYMKYLAP GLLAYGFLQN ILRFCQTQCI VTPLVLFSFL PLVINIGTTY
201: ALVHLAGLGF IGAPIATSIS LWIAFVSLGF YVICSDKFKE TWTGFSMESF HHVVLNLTLS IPSAAMVCLE YWAFEILVFL AGLMRNPEIT TSLVAICVNT
301: ESISYMLTCG LSAATSTRVS NELGAGNVKG AKKATSVSVK LSLVLALGVV IAILVGHDAW VGLFSNSHVI KEGFASLRFF LAASITLDSI QGVLSGVARG
401: CGWQRLATVI NLGTFYLIGM PISVLCGFKL KLHAKGLWIG LICGMFCQSA SLLLMTIFRK WTKLTAATV
Arabidopsis Description
DTX18Protein DETOXIFICATION 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUH3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.