Factsheet for PGSC0003DMT400070650

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
golgi 2
mitochondrion 1
plasma membrane 4
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	mitochondrion, plasma membrane, plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g006730.2.1	Tomato	plasma membrane	89.29	61.35
PGSC0003DMT400078840	Potato	golgi, plasma membrane, vacuole	74.11	53.32
VIT_11s0052g01540.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	61.61	51.88
PGSC0003DMT400065417	Potato	plasma membrane	70.54	49.69
VIT_11s0052g01570.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	62.8	47.85
VIT_11s0052g01560.t01	Wine grape	vacuole	59.82	46.96
VIT_11s0052g01510.t01	Wine grape	golgi, peroxisome, plasma membrane	69.35	46.23
PGSC0003DMT400048259	Potato	plasma membrane	64.58	45.49
PGSC0003DMT400070690	Potato	endoplasmic reticulum, plasma membrane, vacuole	58.93	43.33
PGSC0003DMT400014431	Potato	plasma membrane	58.93	40.0
PGSC0003DMT400046664	Potato	plasma membrane	50.6	35.87
PGSC0003DMT400046666	Potato	plasma membrane	48.21	33.13
PGSC0003DMT400046656	Potato	plasma membrane	45.24	32.62
PGSC0003DMT400078371	Potato	plasma membrane	44.05	32.6
PGSC0003DMT400078374	Potato	plasma membrane	40.77	32.08
PGSC0003DMT400015301	Potato	plasma membrane	45.54	31.68
PGSC0003DMT400078716	Potato	extracellular, plasma membrane, vacuole	38.99	30.47
PGSC0003DMT400026959	Potato	cytosol, plasma membrane, vacuole	43.45	30.42
PGSC0003DMT400078715	Potato	plasma membrane	39.58	28.06
PGSC0003DMT400043016	Potato	cytosol, plasma membrane, vacuole	38.39	27.51
PGSC0003DMT400064458	Potato	plasma membrane	31.85	26.1
PGSC0003DMT400054780	Potato	plasma membrane	28.27	25.27
PGSC0003DMT400049147	Potato	plasma membrane	35.12	24.28
PGSC0003DMT400054764	Potato	plasma membrane	35.12	22.39
PGSC0003DMT400014996	Potato	plasma membrane	28.87	22.15

Protein Annotations

MapMan:24.2.4.1.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006855
GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
UniProt:M1CMH6	InterPro:MATE_fam	PFAM:PF01554	EnsemblPlantsGene:PGSC0003DMG400027465	PGSC:PGSC0003DMG400027465	EnsemblPlants:PGSC0003DMT400070650
PANTHER:PTHR11206	PANTHER:PTHR11206:SF196	TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI000295F588	SEG:seg

Description

TRANSPARENT TESTA 12 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400027465]

Coordinates

chr7:+:2382896..2384716

Molecular Weight (calculated)

37131.3 Da

IEP (calculated)

8.188

GRAVY (calculated)

0.538

Length

336 amino acids

Sequence
(BLAST)

001: MDTQDIECPL IRETVKEEES KNKKNEILEE MKRLLILAGP LMTVNFLIYC LQVISIMFVG HLGELALSGA SMATSFASVT GLSLMGIFSY YLDKIRKYQL
101: KQEVMRYMIP TIFAFALLQC HNRFLQARNN VIPMMFSAGI TTLLHIFTCW ILGFKSGLGN KGAALANVIS YWINLLLLAG YVRISPSCKN TWTGFSKEAF
201: HDIWKYMRLA IPSAVMLCLE IWSFEMMVLL SGLLPNPKLE TSVLSISLNT CAMVYMIPLG LSGATSVRVS NELGAGRPQA ARLAATTAVL LVATEGVVAA
301: IVLISVRKLW GYCYSTEEEV VGYVAEMLVL LAGSTS

Best Arabidopsis Sequence Match ( AT1G71140.1 )
(BLAST)

001: MDSAEKGLLV VSDREEVNKK DGFLRETKKL SYIAGPMIAV NSSMYVLQVI SIMMVGHLGE LFLSSTAIAV SFCSVTGFSV VFGLASALET LCGQANGAKQ
101: YEKLGVHTYT GIVSLFLVCI PLSLLWTYIG DILSLIGQDA MVAQEAGKFA TWLIPALFGY ATLQPLVRFF QAQSLILPLV MSSVSSLCIH IVLCWSLVFK
201: FGLGSLGAAI AIGVSYWLNV TVLGLYMTFS SSCSKSRATI SMSLFEGMGE FFRFGIPSAS MICLEWWSFE FLVLLSGILP NPKLEASVLS VCLSTQSSLY
301: QIPESLGAAA STRVANELGA GNPKQARMAV YTAMVITGVE SIMVGAIVFG ARNVFGYLFS SETEVVDYVK SMAPLLSLSV IFDALHAALS GVARGSGRQD
401: IGAYVNLAAY YLFGIPTAIL LAFGFKMRGR GLWIGITVGS CVQAVLLGLI VILTNWKKQA RKARERVMGD EYEEKESEEE HEYIS

Arabidopsis Description

DTX14Protein DETOXIFICATION 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9C994]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.