Factsheet for VIT_11s0052g01540.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

plastid 3
endoplasmic reticulum 3
plasma membrane 4
extracellular 2
vacuole 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0052g01560.t01	Wine grape	vacuole	96.24	89.72
VIT_11s0052g01570.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	85.96	77.78
VIT_11s0052g01510.t01	Wine grape	golgi, peroxisome, plasma membrane	93.73	74.21
PGSC0003DMT400070650	Potato	plasma membrane	51.88	61.61
Solyc07g006730.2.1	Tomato	plasma membrane	75.19	61.35
PGSC0003DMT400065417	Potato	plasma membrane	72.43	60.59
PGSC0003DMT400078840	Potato	golgi, plasma membrane, vacuole	70.68	60.39
Solyc07g006740.2.1	Tomato	plasma membrane	66.92	56.69
VIT_17s0000g02970.t01	Wine grape	plasma membrane	69.92	56.59
VIT_17s0000g02990.t01	Wine grape	plasma membrane	69.42	56.42
PGSC0003DMT400048259	Potato	plasma membrane	66.67	55.77
PGSC0003DMT400070690	Potato	endoplasmic reticulum, plasma membrane, vacuole	62.66	54.7
VIT_01s0011g04460.t01	Wine grape	plasma membrane	60.4	53.08
VIT_17s0000g09270.t01	Wine grape	plasma membrane	59.4	52.9
VIT_17s0000g03000.t01	Wine grape	plasma membrane	57.39	48.31
VIT_01s0011g04430.t01	Wine grape	plasma membrane	51.38	42.62
VIT_01s0011g04450.t01	Wine grape	cytosol, golgi, plasma membrane	50.63	42.0
VIT_14s0006g02260.t01	Wine grape	plasma membrane	45.86	37.04
VIT_19s0014g02450.t01	Wine grape	plasma membrane	41.6	34.09
VIT_19s0014g02440.t01	Wine grape	plasma membrane	40.85	33.06

Protein Annotations

MapMan:24.2.4.1.1	ProteinID:CCB44605	ProteinID:CCB44605.1	UniProt:F6GXB9	EMBL:FN594964	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0015238
GO:GO:0015297	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:MATE_fam	PFAM:PF01554
PANTHER:PTHR11206	PANTHER:PTHR11206:SF196	TIGR:TC59440	TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI0002108692
ArrayExpress:VIT_11s0052g01540	EnsemblPlantsGene:VIT_11s0052g01540	EnsemblPlants:VIT_11s0052g01540.t01	SEG:seg	:	:

Description

No Description!

Coordinates

chr11:+:19281064..19289232

Molecular Weight (calculated)

42806.1 Da

IEP (calculated)

9.043

GRAVY (calculated)

0.667

Length

399 amino acids

Sequence
(BLAST)

001: MFVGHLGELA LSGASMATSF ASVTGFSLIV GMGSALDTFC GQSFGAKQYH MLGVHKQRAM VVLLLVSIPV AFIWNNTGHI LASLGQDSEI SAEAGLYAHF
101: MIPSIFAFAL LQCHIRFLQA QNNVVPMMIT TGFTTLLHTL TCWMLVFKSG LGNKGAALAN AISYWINVLL LAIYVRISPS CKKTWTGFSK EALHDVLKFL
201: KLAIPSAIML CLEIWSFEMM VLLSGLLPNP KLETSVLSIS LNTYTVLYMI PLGLSGATST RVSNELGAGR PQAALLAVYV ALFMVAIEGI LVATALILGR
301: NFWGYSYSSE EKVVNYVGEM MFLLAGSHFI DSIQSVLSGV VRGSGKQKIG ALVNLGAYYL AGIPSGALLA FVYHIGGKAK KATDRVYDSM VPVNAISSS

Best Arabidopsis Sequence Match ( AT1G71140.1 )
(BLAST)

001: MDSAEKGLLV VSDREEVNKK DGFLRETKKL SYIAGPMIAV NSSMYVLQVI SIMMVGHLGE LFLSSTAIAV SFCSVTGFSV VFGLASALET LCGQANGAKQ
101: YEKLGVHTYT GIVSLFLVCI PLSLLWTYIG DILSLIGQDA MVAQEAGKFA TWLIPALFGY ATLQPLVRFF QAQSLILPLV MSSVSSLCIH IVLCWSLVFK
201: FGLGSLGAAI AIGVSYWLNV TVLGLYMTFS SSCSKSRATI SMSLFEGMGE FFRFGIPSAS MICLEWWSFE FLVLLSGILP NPKLEASVLS VCLSTQSSLY
301: QIPESLGAAA STRVANELGA GNPKQARMAV YTAMVITGVE SIMVGAIVFG ARNVFGYLFS SETEVVDYVK SMAPLLSLSV IFDALHAALS GVARGSGRQD
401: IGAYVNLAAY YLFGIPTAIL LAFGFKMRGR GLWIGITVGS CVQAVLLGLI VILTNWKKQA RKARERVMGD EYEEKESEEE HEYIS

Arabidopsis Description

DTX14Protein DETOXIFICATION 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9C994]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.