Factsheet for VIT_17s0000g03000.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g02970.t01	Wine grape	plasma membrane	60.55	58.22
VIT_11s0052g01540.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	48.31	57.39
VIT_17s0000g02990.t01	Wine grape	plasma membrane	59.07	57.03
VIT_11s0052g01560.t01	Wine grape	vacuole	51.05	56.54
VIT_11s0052g01570.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	51.27	55.1
VIT_01s0011g04460.t01	Wine grape	plasma membrane	52.32	54.63
VIT_17s0000g09270.t01	Wine grape	plasma membrane	50.84	53.79
VIT_11s0052g01510.t01	Wine grape	golgi, peroxisome, plasma membrane	55.91	52.58
VIT_01s0011g04430.t01	Wine grape	plasma membrane	49.58	48.86
VIT_01s0011g04450.t01	Wine grape	cytosol, golgi, plasma membrane	49.16	48.44
VIT_14s0006g02260.t01	Wine grape	plasma membrane	42.41	40.69
VIT_19s0014g02450.t01	Wine grape	plasma membrane	39.66	38.6
VIT_19s0014g02440.t01	Wine grape	plasma membrane	39.03	37.53

Protein Annotations

EntrezGene:100256154	wikigene:100256154	MapMan:24.2.4.1.1	ProteinID:CCB43249	ProteinID:CCB43249.1	UniProt:F6GTS5
EMBL:FN594950	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006855
GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
EntrezGene:LOC100256154	wikigene:LOC100256154	InterPro:MATE_fam	PFAM:PF01554	PANTHER:PTHR11206	PANTHER:PTHR11206:SF198
TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI0002108C18	ArrayExpress:VIT_17s0000g03000	EnsemblPlantsGene:VIT_17s0000g03000	EnsemblPlants:VIT_17s0000g03000.t01
RefSeq:XP_002277690	RefSeq:XP_002277690.2	SEG:seg	:	:	:

Description

Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:F6GTS5]

Coordinates

chr17:-:2780296..2782669

Molecular Weight (calculated)

51782.7 Da

IEP (calculated)

7.111

GRAVY (calculated)

0.770

Length

474 amino acids

Sequence
(BLAST)

001: MDSEEEILSP CVSDSDVDDK DLWRVEIGEE VKKQLALAGP LTIVGVLRYL TQAVSLMFVG HLGELPLASA SMAASFASVT GFSLLIGMGS ALDTLCGQAY
101: GAKHYHMLGI HMQRAMSVLL LVSVPLAFIW AKTEHILMNL GQDPYISRGA GRYVWFMMPT LFSCGILQCL VRFLQTQKIV FPVMLISAIT TLFHFPTCWI
201: LVFKTSLGSA GAALACSISS WINVFLLVLY VKFSPACKQT WTGVSEMNIQ DVLSFLRLAV PSASMVCLEF WSFQVLILIA GILPNPQLET SVLSIILTTC
301: AMLFNIYLGI GSAGSIRISN ELGAGRPQKA YLAVHAVLIL ANVFGMLLGS IMFLLRRTWG YLFSNKEEVV KYVASMMPLL ATSASLDAIQ CALSGIVRGC
401: GWQKIGAIVN LGAYYLVGIP CALLFTFDFG LGGKGLWMGI LCALFLQMLC LLVVTLQTNW EQQVIELIFH FGNQ

Best Arabidopsis Sequence Match ( AT1G71140.1 )
(BLAST)

001: MDSAEKGLLV VSDREEVNKK DGFLRETKKL SYIAGPMIAV NSSMYVLQVI SIMMVGHLGE LFLSSTAIAV SFCSVTGFSV VFGLASALET LCGQANGAKQ
101: YEKLGVHTYT GIVSLFLVCI PLSLLWTYIG DILSLIGQDA MVAQEAGKFA TWLIPALFGY ATLQPLVRFF QAQSLILPLV MSSVSSLCIH IVLCWSLVFK
201: FGLGSLGAAI AIGVSYWLNV TVLGLYMTFS SSCSKSRATI SMSLFEGMGE FFRFGIPSAS MICLEWWSFE FLVLLSGILP NPKLEASVLS VCLSTQSSLY
301: QIPESLGAAA STRVANELGA GNPKQARMAV YTAMVITGVE SIMVGAIVFG ARNVFGYLFS SETEVVDYVK SMAPLLSLSV IFDALHAALS GVARGSGRQD
401: IGAYVNLAAY YLFGIPTAIL LAFGFKMRGR GLWIGITVGS CVQAVLLGLI VILTNWKKQA RKARERVMGD EYEEKESEEE HEYIS

Arabidopsis Description

DTX14Protein DETOXIFICATION 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9C994]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.