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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc04g007530.2.1 Tomato plasma membrane 96.27 96.67
PGSC0003DMT400078371 Potato plasma membrane 65.22 69.38
PGSC0003DMT400078374 Potato plasma membrane 61.28 69.32
VIT_01s0011g04450.t01 Wine grape cytosol, golgi, plasma membrane 62.73 62.99
KRH35832 Soybean plasma membrane 60.25 61.26
VIT_01s0011g04430.t01 Wine grape plasma membrane 60.66 60.91
KRH35829 Soybean golgi, nucleus, vacuole 59.42 60.17
KRG90943 Soybean plasma membrane 50.72 59.9
KRG90944 Soybean plasma membrane 59.01 59.87
GSMUA_Achr3P29080_001 Banana plasma membrane 54.66 59.59
CDY67968 Canola plasma membrane 59.21 59.09
Bra003935.1-P Field mustard plasma membrane 56.31 59.0
AT1G71140.1 Thale cress plasma membrane 59.21 58.97
KRH35828 Soybean plasma membrane 58.18 58.79
KRH35833 Soybean plasma membrane 55.69 58.61
CDY49220 Canola plasma membrane 59.01 58.52
CDY72127 Canola plasma membrane 38.51 58.49
CDX72778 Canola plasma membrane 59.01 58.04
GSMUA_Achr4P03730_001 Banana endoplasmic reticulum, plasma membrane, vacuole 53.21 58.01
Bra016158.1-P Field mustard plasma membrane 58.8 57.96
CDX68324 Canola plasma membrane 58.39 57.91
CDX96304 Canola plasma membrane 58.59 57.87
KRH53068 Soybean plasma membrane 57.14 57.5
Bra007964.1-P Field mustard cytosol, golgi, plasma membrane 58.18 56.88
PGSC0003DMT400078716 Potato extracellular, plasma membrane, vacuole 49.9 56.05
TraesCS3A01G229400.1 Wheat plasma membrane 45.55 55.14
AT1G15180.1 Thale cress plasma membrane 54.66 54.77
CDY71492 Canola plasma membrane 49.07 54.61
TraesCS3B01G255200.2 Wheat plasma membrane 54.04 54.6
TraesCS3D01G227600.2 Wheat plasma membrane 53.83 54.39
TraesCS3B01G298700.1 Wheat cytosol, plasma membrane, vacuole 54.24 54.24
TraesCS3D01G265400.1 Wheat plasma membrane 54.24 54.24
CDX77471 Canola plasma membrane 44.31 54.18
CDX81701 Canola plasma membrane 53.83 54.17
CDX83993 Canola plasma membrane 49.07 54.11
AT1G15170.1 Thale cress plasma membrane 53.83 54.05
TraesCS3A01G265100.1 Wheat plasma membrane 54.04 54.04
PGSC0003DMT400026959 Potato cytosol, plasma membrane, vacuole 53.62 53.96
CDY39617 Canola plasma membrane 53.62 53.96
Bra026160.1-P Field mustard plasma membrane 53.21 53.65
CDY52017 Canola plasma membrane 53.21 53.54
Zm00001d009494_P001 Maize plasma membrane 51.97 53.52
Zm00001d043838_P002 Maize plasma membrane 53.83 53.39
Os01t0684900-01 Rice plasma membrane 54.24 53.36
CDY36531 Canola plasma membrane 53.0 53.33
EES03448 Sorghum plasma membrane 53.83 53.17
Bra026778.1-P Field mustard plasma membrane 52.8 53.01
Bra016671.1-P Field mustard plasma membrane 52.8 52.9
Os05t0554000-01 Rice cytosol, peroxisome, plasma membrane 44.51 52.7
TraesCS1B01G016700.1 Wheat plasma membrane 36.23 52.4
PGSC0003DMT400078715 Potato plasma membrane 50.93 51.9
AT1G15150.1 Thale cress plasma membrane 52.17 51.75
KRG90942 Soybean plasma membrane 59.42 51.71
OQU78400 Sorghum cytosol, plasma membrane, vacuole 53.42 51.6
PGSC0003DMT400043016 Potato cytosol, plasma membrane, vacuole 49.9 51.39
AT1G15160.1 Thale cress plasma membrane 51.55 51.13
TraesCSU01G003900.1 Wheat cytosol, plasma membrane, vacuole 51.55 50.4
TraesCS1D01G388600.1 Wheat plasma membrane 51.14 50.2
TraesCS1A01G380900.1 Wheat plasma membrane 51.14 50.1
HORVU1Hr1G084190.9 Barley mitochondrion, peroxisome, plasma membrane 50.72 49.4
TraesCS2B01G229100.1 Wheat plasma membrane 48.45 48.15
TraesCS2D01G214300.1 Wheat plasma membrane 48.03 47.74
Zm00001d027921_P002 Maize plasma membrane 48.86 47.58
TraesCS1D01G009800.1 Wheat plasma membrane 48.24 46.51
PGSC0003DMT400014431 Potato plasma membrane 47.2 46.06
EER95390 Sorghum plasma membrane 48.03 45.94
TraesCS2A01G202000.1 Wheat plasma membrane 48.45 45.7
PGSC0003DMT400065417 Potato plasma membrane 45.13 45.7
PGSC0003DMT400046664 Potato plasma membrane 44.72 45.57
PGSC0003DMT400070650 Potato plasma membrane 31.68 45.54
Os01t0504500-02 Rice plasma membrane 47.0 45.22
HORVU2Hr1G039850.10 Barley peroxisome, plasma membrane, plastid 47.0 45.04
PGSC0003DMT400078840 Potato golgi, plasma membrane, vacuole 43.27 44.75
PGSC0003DMT400048259 Potato plasma membrane 43.69 44.23
PGSC0003DMT400070690 Potato endoplasmic reticulum, plasma membrane, vacuole 40.58 42.89
PGSC0003DMT400046666 Potato plasma membrane 42.65 42.13
PGSC0003DMT400046656 Potato plasma membrane 40.58 42.06
Bra014999.1-P Field mustard plasma membrane 48.03 40.99
PGSC0003DMT400054780 Potato plasma membrane 30.64 39.36
PGSC0003DMT400049147 Potato plasma membrane 37.27 37.04
PGSC0003DMT400014996 Potato plasma membrane 31.47 34.7
PGSC0003DMT400054764 Potato plasma membrane 37.68 34.54
PGSC0003DMT400064458 Potato plasma membrane 26.92 31.71
HORVU3Hr1G063430.3 Barley plastid 33.95 29.18
Protein Annotations
MapMan:24.2.4.1.1ncoils:CoilGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085UniProt:M1A5T2InterPro:MATE_famPFAM:PF01554EnsemblPlantsGene:PGSC0003DMG400005967PGSC:PGSC0003DMG400005967
EnsemblPlants:PGSC0003DMT400015301PANTHER:PTHR11206PANTHER:PTHR11206:SF87TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI000296A6C9
SEG:seg:::::
Description
TRANSPARENT TESTA 12 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400005967]
Coordinates
chr4:-:1930641..1936214
Molecular Weight (calculated)
53263.6 Da
IEP (calculated)
7.332
GRAVY (calculated)
0.714
Length
483 amino acids
Sequence
(BLAST)
001: MGSYLEEGLL VKEKLLEENN IEVVLTDQEV KWDVIWMEIK KIGYLAGPMA SVTLSQYLLQ VISMMMVGHL GQLYLSSTAI AVSLATVTGL TLLLGMASAL
101: ETLCGQAYGA KQYKKIGTQT YTAIFCLFIV CIPLSMLWIY IGRLLVFIGQ DPQISHEAGR FIMCLIPTLF GSAALQPLVR YYLMQSMILP LIISSSVTIA
201: FHVPLCWLLV YHTGFKNIGA AFAMDISIWL NVTILASYMR FSPACEKTRV PISSEIFHGT KEFFRFAIPS AVMICLEGWS FEFIVLLSGL LPNPELETSV
301: LSVCLNTIAT LYSIPYGLSS AVSTRVSNEL GAGNPQRARI SVFTVMLLTV MEAILISATL FGCRNIFGFI YSSEMEVVNY VAKIAPLLSL SVIMDALQAS
401: LSGVARGCGW QHIGAYVNLA SFYLFGIPIA LLLGFWLELR GKGLWIGILC GATLQTILLS IITSFTNWKK QAEMAKERLL ELK
Best Arabidopsis Sequence Match ( AT1G71140.1 )
(BLAST)
001: MDSAEKGLLV VSDREEVNKK DGFLRETKKL SYIAGPMIAV NSSMYVLQVI SIMMVGHLGE LFLSSTAIAV SFCSVTGFSV VFGLASALET LCGQANGAKQ
101: YEKLGVHTYT GIVSLFLVCI PLSLLWTYIG DILSLIGQDA MVAQEAGKFA TWLIPALFGY ATLQPLVRFF QAQSLILPLV MSSVSSLCIH IVLCWSLVFK
201: FGLGSLGAAI AIGVSYWLNV TVLGLYMTFS SSCSKSRATI SMSLFEGMGE FFRFGIPSAS MICLEWWSFE FLVLLSGILP NPKLEASVLS VCLSTQSSLY
301: QIPESLGAAA STRVANELGA GNPKQARMAV YTAMVITGVE SIMVGAIVFG ARNVFGYLFS SETEVVDYVK SMAPLLSLSV IFDALHAALS GVARGSGRQD
401: IGAYVNLAAY YLFGIPTAIL LAFGFKMRGR GLWIGITVGS CVQAVLLGLI VILTNWKKQA RKARERVMGD EYEEKESEEE HEYIS
Arabidopsis Description
DTX14Protein DETOXIFICATION 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9C994]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.