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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • cytosol 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plastid, secretory
BaCelLo:plastid
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1A01G032900.1 Wheat plasma membrane 91.21 90.64
TraesCS1D01G034300.1 Wheat plasma membrane 89.75 89.19
HORVU0Hr1G039670.1 Barley plasma membrane 80.96 80.12
HORVU6Hr1G084080.3 Barley plasma membrane 79.92 78.6
Os07t0502200-01 Rice plasma membrane 74.06 73.44
HORVU0Hr1G002600.4 Barley golgi 55.02 72.05
Zm00001d021569_P001 Maize plasma membrane 72.8 72.05
GSMUA_Achr2P13840_001 Banana plasma membrane 54.39 59.23
EER99421 Sorghum plasma membrane 71.55 57.77
CDY65688 Canola plasma membrane 43.31 54.33
VIT_19s0014g02440.t01 Wine grape plasma membrane 55.86 54.16
PGSC0003DMT400054780 Potato plasma membrane 42.47 53.99
HORVU2Hr1G063690.5 Barley cytosol, plasma membrane 57.53 52.99
VIT_19s0014g02450.t01 Wine grape plasma membrane 53.97 52.98
GSMUA_Achr4P27830_001 Banana plasma membrane 61.72 52.87
CDY18116 Canola plasma membrane 52.72 52.28
Solyc10g007360.2.1 Tomato plastid 52.72 52.28
Solyc10g007100.2.1 Tomato plasma membrane 53.35 52.25
PGSC0003DMT400049147 Potato plasma membrane 52.93 52.06
CDY17027 Canola plasma membrane 43.51 52.0
CDY09031 Canola plasma membrane 51.67 52.0
AT3G23560.1 Thale cress plasma membrane 51.67 51.78
Bra040861.1-P Field mustard plasma membrane 50.84 51.48
KRH22058 Soybean plasma membrane 54.18 51.39
AT3G23550.1 Thale cress plasma membrane 50.0 50.96
Bra023720.1-P Field mustard plasma membrane 50.21 49.69
KRH22061 Soybean cytosol, peroxisome, plasma membrane 51.88 49.6
KRH27266 Soybean plasma membrane 29.71 49.48
CDY18118 Canola plasma membrane 46.44 49.33
PGSC0003DMT400064458 Potato plasma membrane 38.08 44.39
Solyc10g007380.1.1 Tomato plastid 47.28 44.14
KRH22064 Soybean plasma membrane 48.54 43.28
PGSC0003DMT400054764 Potato plasma membrane 47.28 42.88
Bra023719.1-P Field mustard plasma membrane 47.7 42.7
PGSC0003DMT400014996 Potato plasma membrane 38.49 42.01
Solyc10g007370.1.1 Tomato plasma membrane, plastid 47.28 41.32
HORVU3Hr1G005230.2 Barley endoplasmic reticulum, plasma membrane 32.43 37.44
HORVU0Hr1G022350.4 Barley plasma membrane 37.03 36.88
HORVU7Hr1G121100.1 Barley plasma membrane 36.19 36.81
HORVU2Hr1G068140.14 Barley endoplasmic reticulum, golgi, mitochondrion, peroxisome 38.91 36.54
HORVU7Hr1G047080.17 Barley plasma membrane 38.49 36.22
HORVU7Hr1G112340.13 Barley cytosol, plasma membrane 38.08 36.18
HORVU2Hr1G039850.10 Barley peroxisome, plasma membrane, plastid 37.66 35.71
HORVU1Hr1G084190.9 Barley mitochondrion, peroxisome, plasma membrane 35.77 34.48
HORVU7Hr1G108070.4 Barley golgi, mitochondrion, plasma membrane 23.01 33.74
HORVU2Hr1G068090.13 Barley plastid 38.49 32.62
HORVU7Hr1G047070.3 Barley mitochondrion 37.03 32.24
HORVU5Hr1G091820.13 Barley peroxisome 31.8 30.83
HORVU7Hr1G095900.1 Barley plastid 33.68 30.09
CDY18117 Canola cytosol, extracellular, plasma membrane 2.09 28.57
HORVU3Hr1G063430.3 Barley plastid 27.2 23.13
Protein Annotations
EnsemblPlants:HORVU1Hr1G003490.2EnsemblPlantsGene:HORVU1Hr1G003490GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085InterPro:MATE_famPANTHER:PTHR11206PANTHER:PTHR11206:SF199PFAM:PF01554SEG:seg
TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI000295F510UniProt:M0X9K3MapMan:24.2.4.1.1:
Description
Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:M0X9K3]
Coordinates
chrchr1H:-:7711755..7720658
Molecular Weight (calculated)
51410.1 Da
IEP (calculated)
7.606
GRAVY (calculated)
0.853
Length
478 amino acids
Sequence
(BLAST)
001: MSSAPLLGAC ELPGEAKRRS PAWLRRLIDT EEAWVQLQFA VPMVLTNMSY YAIPLVSVMF SGHLGNVHLA GATLGNSWAT VTGYAFVTGM SGALETLCGQ
101: AYGARMYRLL GLYLQSSLIM SAVVSVLISV LWLFTEPLLV CLHQEPEVSR AAAEFIRYQI PGLFAYSFLQ CLLRYVQTQC IVVPLVVCSM VPFLLHICLN
201: YLLVNVLGLG LTGASLAISA TFWVSCLMLL AYVMASKEFD GTWKGFSAEA FSYVLPTIKL AMPSAIMVCL EYWAIELLVL IAGLLPGSTE STSLIAICAS
301: TQAISYMITY GFSAAVSTRV SNEIGAGNVD SAKGAVMVTM KLSVLLALSF ILLLIVGHGL WASLFTGSAV MAAKFAAITP LLTISIVLDS AQGVLSGVAR
401: GCGWQHLAAM TNLVAFYLAG MPVAIFLAFK LNLYTHGLWL GLITGLACQT SVMVLITLRT KWSNLVDAME KNRDGYVA
Best Arabidopsis Sequence Match ( AT2G34360.1 )
(BLAST)
001: MREEREDMLS WPLIGEKEKR SRFVKEEVEK QLLLSGPLIA VSLLQFCLQI ISVMFVGHLG SLPLSAASIA TSFASVTGFT FLMGTASAMD TVCGQSYGAK
101: MYGMLGIQMQ RAMLVLTLLS VPLSIVWANT EHFLVFFGQD KSIAHLSGSY ARFMIPSIFA YGLLQCLNRF LQAQNNVIPV VICSGVTTSL HVIICWVLVL
201: KSGLGFRGAA VANAISYWLN VILLSCYVKF SPSCSLTWTG FSKEARRDII PFMKLVIPSA FMVCSLEMWS FELLVLSSGL LPNPVLETSC PRTVWMIPFG
301: LSGAASTRVS NELGSGNPKG AKLAVRVVLS FSIVESILVG TVLILIRKIW GFAYSSDPEV VSHVASMLPI LALGHSLDSF QTVLSGVARG CGWQKIGAFV
401: NLGSYYLVGV PFGLLLGFHF HVGGRGLWLG IICALIVQGV CLSLITFFTN WDEEVKKATS RAKSSSEVKE FAVDNGSILV
Arabidopsis Description
DTX15Protein DETOXIFICATION 15 [Source:UniProtKB/Swiss-Prot;Acc:F4IHU9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.