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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • mitochondrion 3
  • peroxisome 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, peroxisome, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:peroxisome
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d021569_P001 Maize plasma membrane 73.14 89.65
TraesCS2D01G142100.1 Wheat plasma membrane 59.46 80.73
Os07t0502200-01 Rice plasma membrane 65.54 80.5
TraesCS2A01G139200.1 Wheat plasma membrane 62.67 76.97
TraesCS6B01G383300.1 Wheat plasma membrane 62.67 76.81
TraesCS2B01G163300.3 Wheat cytosol, plasma membrane, vacuole 62.67 76.65
TraesCS6A01G350400.1 Wheat plasma membrane 62.5 76.6
TraesCS6D01G332800.1 Wheat cytosol, plasma membrane, vacuole 62.16 75.88
HORVU0Hr1G039670.1 Barley plasma membrane 61.66 75.57
HORVU6Hr1G084080.3 Barley plasma membrane 61.82 75.31
HORVU1Hr1G003490.2 Barley plasma membrane 57.77 71.55
TraesCS1A01G032900.1 Wheat plasma membrane 57.94 71.31
TraesCS1D01G034300.1 Wheat plasma membrane 57.6 70.89
HORVU0Hr1G002600.4 Barley golgi 43.24 70.14
GSMUA_Achr2P13840_001 Banana plasma membrane 47.47 64.01
GSMUA_Achr4P27830_001 Banana plasma membrane 53.89 57.17
OQU88303 Sorghum cytosol, peroxisome, plasma membrane 47.3 55.34
CDY65688 Canola plasma membrane 35.14 54.59
VIT_19s0014g02440.t01 Wine grape plasma membrane 44.43 53.35
VIT_19s0014g02450.t01 Wine grape plasma membrane 43.24 52.57
CDY17027 Canola plasma membrane 35.47 52.5
CDY18116 Canola plasma membrane 41.89 51.45
CDY09031 Canola plasma membrane 41.22 51.37
Bra040861.1-P Field mustard plasma membrane 40.71 51.06
AT3G23550.1 Thale cress plasma membrane 40.37 50.96
Solyc10g007100.2.1 Tomato plasma membrane 41.89 50.82
PGSC0003DMT400054780 Potato plasma membrane 32.26 50.8
AT3G23560.1 Thale cress plasma membrane 40.88 50.73
PGSC0003DMT400049147 Potato plasma membrane 41.55 50.62
Bra023720.1-P Field mustard plasma membrane 40.37 49.48
KRH22058 Soybean plasma membrane 42.06 49.4
CDY18118 Canola plasma membrane 37.5 49.33
Solyc10g007360.2.1 Tomato plastid 39.7 48.76
KRH22061 Soybean cytosol, peroxisome, plasma membrane 40.54 48.0
KRH27266 Soybean plasma membrane 22.8 47.04
Solyc10g007380.1.1 Tomato plastid 38.51 44.53
PGSC0003DMT400064458 Potato plasma membrane 30.41 43.9
PGSC0003DMT400054764 Potato plasma membrane 38.18 42.88
KRH22064 Soybean plasma membrane 38.68 42.72
Solyc10g007370.1.1 Tomato plasma membrane, plastid 38.68 41.86
PGSC0003DMT400014996 Potato plasma membrane 30.91 41.78
Bra023719.1-P Field mustard plasma membrane 37.33 41.39
KXG19962 Sorghum plasma membrane 31.93 39.46
EES06698 Sorghum plasma membrane 31.93 39.38
KXG21780 Sorghum plasma membrane 29.9 39.33
EES06697 Sorghum plasma membrane 31.93 38.81
EER90350 Sorghum plasma membrane 31.59 38.72
KXG26020 Sorghum plasma membrane 31.25 38.54
OQU77813 Sorghum plasma membrane 30.41 37.97
EES03448 Sorghum plasma membrane 30.74 37.22
EER95390 Sorghum plasma membrane 30.57 35.84
KXG30060 Sorghum plasma membrane 30.57 35.42
OQU78400 Sorghum cytosol, plasma membrane, vacuole 29.9 35.4
OQU80064 Sorghum plasma membrane 17.74 35.35
OQU77045 Sorghum plastid 22.8 32.85
CDY18117 Canola cytosol, extracellular, plasma membrane 1.35 22.86
Protein Annotations
MapMan:24.2.4.1.1EntrezGene:8080718UniProt:C5X9B3EnsemblPlants:EER99421ProteinID:EER99421ProteinID:EER99421.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150
GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:MATE_fam
PFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF199EnsemblPlantsGene:SORBI_3002G311200TIGRFAMs:TIGR00797TMHMM:TMhelix
UniParc:UPI0001A83FF8RefSeq:XP_002462900.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr2:-:68498413..68506080
Molecular Weight (calculated)
62364.3 Da
IEP (calculated)
10.023
GRAVY (calculated)
0.570
Length
592 amino acids
Sequence
(BLAST)
001: MRQCRAAIFI FFPIHSRLHA MLRAESHLHA IIPRGRLRQR GRGRAHDIST AAAAPRFLVG SRRSAAAAGS RRLLTGGHRR RPFAASSGGT PQRAGGASGP
101: SSDGGGSMSS SAPLLGAEEA GGGEPAPAPR PSSWSWVERV VDTAEARAQL RFAVPMVVTS MAYYGIPLVS VMFSGHLGDD VHLAGATLGN SWATVTGYAF
201: VTGLSGALET LCGQAYGAGL YRMLGLYLQS SLIMSAAVSA AVSALWWFTE PVLLFLRQEP EVSRAAAAFV QAQVPGLFAF AFVQCLLRYL QTQSVVLPLV
301: VCSVAPFALH VALTHLLVNV LGLGLAGAGA AVSATFWVSC LLLRAYVLRS GAFSETWEGF SAEAFKYVAP TVKLATPSAV MVCLEYWAFE LLVLIAGLLP
401: NSTVSTSLIA MCSSTEAIAY MITFGFSAAV STRVSNEIGA GNVERAKNAV SVTMKLSVFL AVTFVLLLAF GHGPWARLFS GSATIVSAFG AIAPLMVVSI
501: VLDSAQGVLS GVARGCGWQH LAAVTNLVAF YFVGMPLAVL FAFKLDLRAR GLWAGLICGL TCQASTLLVI TVRTKWSKLA EAMQEKKASY VA
Best Arabidopsis Sequence Match ( AT3G23560.1 )
(BLAST)
001: MADPATSSPL LDDHVGGEDE RGRRSRSSTL VQKVIDVEEA KAQMIYSLPM ILTNVFYYCI PITSVMFASH LGQLELAGAT LANSWATVSG FAFMVGLSGS
101: LETLCGQGFG AKRYRMLGVH LQSSCIVSLV FSILITIFWF FTESIFGLLR QDPSISKQAA LYMKYQAPGL LAYGFLQNIL RFCQTQSIIA PLVIFSFVPL
201: VINIATAYVL VYVAGLGFIG APIATSISLW IAFLSLGTYV MCSEKFKETW TGFSLESFRY IVINLTLSLP SAAMVCLEYW AFEILVFLAG VMPNPEINTS
301: LVAICVNTEA ISYMLTYGLS AAASTRVSNE LGAGNVKGAK KATSVSVKLS LVLALGVVIV LLVGHDGWVG LFSDSYVIKE EFASLRFFLA ASITLDSIQG
401: VLSGVARGCG WQRLVTVINL ATFYLIGMPI AAFCGFKLKF YAKGLWIGLI CGIFCQSSSL LLMTIFRKWT KLNVATV
Arabidopsis Description
DTX19Protein DETOXIFICATION 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUH2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.