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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane, vacuole
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400043016 Potato cytosol, plasma membrane, vacuole 95.11 95.31
Solyc02g091050.2.1 Tomato plasma membrane 71.06 70.46
Solyc02g063270.2.1 Tomato plasma membrane 57.02 59.03
GSMUA_Achr3P29080_001 Banana plasma membrane 52.98 56.21
GSMUA_Achr4P03730_001 Banana endoplasmic reticulum, plasma membrane, vacuole 52.34 55.53
Solyc02g063260.2.1 Tomato plasma membrane 57.45 54.88
Solyc02g091070.2.1 Tomato plasma membrane 54.68 54.56
KRH01699 Soybean plasma membrane 46.38 53.69
Zm00001d009494_P001 Maize plasma membrane 52.13 52.24
Solyc05g008510.2.1 Tomato plasma membrane 52.55 51.67
KRH70420 Soybean plasma membrane 51.7 51.05
KRH70422 Soybean plasma membrane 51.7 50.41
KRH56518 Soybean plasma membrane 52.13 50.41
EES03448 Sorghum plasma membrane 52.34 50.31
KRG93178 Soybean plasma membrane 53.19 50.2
Solyc04g007530.2.1 Tomato plasma membrane 51.28 50.1
AT2G04100.1 Thale cress plasma membrane 51.49 50.1
Zm00001d043838_P002 Maize plasma membrane 51.91 50.1
OQU78400 Sorghum cytosol, plasma membrane, vacuole 53.19 50.0
Os01t0684900-01 Rice plasma membrane 51.91 49.69
TraesCS3A01G229400.1 Wheat plasma membrane 41.91 49.37
CDX81843 Canola plasma membrane 50.0 49.37
AT1G66780.1 Thale cress plasma membrane 50.85 49.28
Solyc02g091080.1.1 Tomato golgi, peroxisome, plasma membrane 52.98 49.11
CDY27886 Canola plasma membrane 50.43 49.07
CDY50254 Canola plasma membrane 50.43 49.07
Bra015133.1-P Field mustard plasma membrane 50.43 49.07
CDY50255 Canola cytosol, peroxisome, vacuole 24.89 48.95
Os05t0554000-01 Rice cytosol, peroxisome, plasma membrane 42.34 48.77
Bra013214.1-P Field mustard plasma membrane 49.36 48.74
Solyc05g008500.1.1 Tomato plasma membrane 47.23 48.68
AT2G04090.1 Thale cress plasma membrane 49.36 48.64
TraesCS2B01G229100.1 Wheat plasma membrane 50.21 48.56
AT2G04040.1 Thale cress vacuole 49.15 48.53
CDY15087 Canola plasma membrane 49.15 48.53
CDY71754 Canola plasma membrane 27.23 48.48
Bra035241.1-P Field mustard plasma membrane 51.49 48.4
AT2G04050.1 Thale cress plasma membrane 48.94 48.32
CDX86801 Canola plasma membrane 51.49 48.3
KRH01702 Soybean plasma membrane 39.79 48.2
CDY36231 Canola plasma membrane 46.6 48.13
CDY21736 Canola plasma membrane 48.72 48.11
TraesCS3B01G298700.1 Wheat cytosol, plasma membrane, vacuole 49.36 48.03
TraesCS3A01G265100.1 Wheat plasma membrane 49.36 48.03
Bra004188.1-P Field mustard plasma membrane 47.23 47.95
TraesCS1B01G016700.1 Wheat plasma membrane 34.04 47.9
CDX96130 Canola plasma membrane 48.09 47.88
TraesCS3D01G265400.1 Wheat plasma membrane 49.15 47.83
TraesCSU01G003900.1 Wheat cytosol, plasma membrane, vacuole 50.21 47.77
TraesCS2D01G214300.1 Wheat plasma membrane 49.36 47.74
CDY13241 Canola plasma membrane 51.28 47.72
TraesCS3D01G227600.2 Wheat plasma membrane 48.51 47.7
TraesCS3B01G255200.2 Wheat plasma membrane 48.51 47.7
TraesCS1A01G380900.1 Wheat plasma membrane 50.0 47.67
Bra030999.1-P Field mustard plasma membrane 43.4 47.66
TraesCS1D01G388600.1 Wheat plasma membrane 49.79 47.56
CDY72452 Canola cytosol, extracellular, mitochondrion 9.36 47.31
AT2G04080.1 Thale cress plasma membrane 47.66 47.06
AT1G66760.2 Thale cress cytosol, peroxisome, plasma membrane 47.87 46.68
AT1G64820.1 Thale cress plasma membrane 49.79 46.61
HORVU1Hr1G084190.9 Barley mitochondrion, peroxisome, plasma membrane 49.15 46.57
CDY36229 Canola plasma membrane 48.51 46.15
Zm00001d027921_P002 Maize plasma membrane 48.51 45.97
CDX87974 Canola cytosol, peroxisome, plasma membrane 46.17 45.88
TraesCS2A01G202000.1 Wheat plasma membrane 49.57 45.51
EER95390 Sorghum plasma membrane 48.72 45.35
Bra015208.1-P Field mustard cytosol, peroxisome, plasma membrane 46.38 45.23
HORVU2Hr1G039850.10 Barley peroxisome, plasma membrane, plastid 48.3 45.04
Os01t0504500-02 Rice plasma membrane 48.09 45.02
CDY12351 Canola cytosol, peroxisome, plasma membrane 45.96 44.81
CDX96129 Canola plasma membrane 48.94 44.4
TraesCS1D01G009800.1 Wheat plasma membrane 47.23 44.31
Solyc03g112250.1.1 Tomato nucleus, peroxisome, plasma membrane 45.96 44.17
Solyc03g118970.2.1 Tomato plasma membrane 45.74 43.43
Solyc07g006730.2.1 Tomato plasma membrane 44.89 43.15
CDY36230 Canola plasma membrane 49.15 43.1
Solyc04g007540.1.1 Tomato plasma membrane 43.62 42.71
Solyc07g006740.2.1 Tomato plasma membrane 41.91 41.83
Solyc03g112260.2.1 Tomato plasma membrane 43.62 39.5
Solyc10g007360.2.1 Tomato plastid 39.36 38.38
Solyc10g007100.2.1 Tomato plasma membrane 37.87 36.48
Solyc10g007380.1.1 Tomato plastid 38.09 34.96
Solyc10g007370.1.1 Tomato plasma membrane, plastid 38.09 32.72
Bra015131.1-P Field mustard cytosol 48.09 29.7
Bra004187.1-P Field mustard plasma membrane 48.94 26.08
HORVU3Hr1G063430.3 Barley plastid 30.43 25.44
Protein Annotations
EnsemblPlants:Solyc03g034400.2.1EnsemblPlantsGene:Solyc03g034400.2GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085InterPro:MATE_famPANTHER:PTHR11206PANTHER:PTHR11206:SF254PFAM:PF01554TIGRFAMs:TIGR00797
TMHMM:TMhelixUniParc:UPI0002767D9DUniProt:K4BFW0MapMan:24.2.4.1.1::
Description
Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:K4BFW0]
Coordinates
chr3:-:6323347..6328075
Molecular Weight (calculated)
51595.3 Da
IEP (calculated)
7.552
GRAVY (calculated)
0.733
Length
470 amino acids
Sequence
(BLAST)
001: MEEGLLLPEK RESLKTITTW GSLLEAMKKV CYIAIPMIVV NVTQHLIRVL SMMMLGHLSE LSLSGASVAT SLTNVTGFSL LVGMASGLET LCGQAYGAKQ
101: YKKLGIYTTG AIISLLLVCI PISILWLFMD KILIFMHQDP LISREAGKYS IWLLISLFPF AILQAVTRYL QTQSLILPMV VSSIATLCFH VPICWLCVFT
201: LDFGSVGAAF AIGLSYWFNL LILGLYVKYS KSCEKTRLYF SKEEVLASIR EFFPLAIPSA CMVCLEWWTF EIVILLAGVL PNPQLETSVL SICLLIASTH
301: YFLPFSLGAG ASTRVSNELG AGNDEAAKMA VRAALTISMA DAIISGTLFY CCRHIVGYAF SNEKEVVDYI SEMAPFLCIL MVSDCIQGVL SGVARGSGWQ
401: HLGAYVNLGS FYLAGIPTAI VCGFLFHLQG KGLWIGLNVG NVLQSLLLSI ITSFTDWKKQ ASIARERIFY
Best Arabidopsis Sequence Match ( AT2G04100.1 )
(BLAST)
001: MEDPLLLGDN QIITGSLKPT PTWRMNFTAE LKNLSRMALP MATVTVAQYL LPVISVMVAG HRSELQLSGV ALATSFTNVS GFSVMFGLAG ALETLCGQAY
101: GAKQYAKIGT YTFSAIVSNV PIVVLISILW FYMDKLFVSL GQDPDISKVA GSYAVCLIPA LLAQAVQQPL TRFLQTQGLV LPLLYCAITT LLFHIPVCLI
201: LVYAFGLGSN GAALAIGLSY WFNVLILALY VRFSSSCEKT RGFVSDDFVL SVKQFFQYGI PSAAMTTIEW SLFEFLILSS GLLPNPKLET SVLSICLTTS
301: SLHYVIPMGI GAAGSIRVSN ELGAGNPEVA RLAVFAGIFL WFLEATICST LLFICRDIFG YAFSNSKEVV DYVTELSPLL CISFLVDGFS AVLGGVARGS
401: GWQHIGAWAN VVAYYLLGAP VGLFLGFWCH MNGKGLWIGV VVGSTAQGII LAIVTACMSW NEQAAKARQR IVVRTSSFGN GLA
Arabidopsis Description
DTX6Protein DETOXIFICATION 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWF5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.