Factsheet for Os06t0494400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19962	Sorghum	plasma membrane	82.04	83.92
TraesCS7A01G230500.1	Wheat	plasma membrane	81.43	82.61
TraesCS7D01G230900.1	Wheat	plasma membrane	81.84	82.0
TraesCS7B01G196300.1	Wheat	plasma membrane	81.63	81.97
Os06t0495500-01	Rice	plasma membrane	78.98	80.79
HORVU7Hr1G047080.17	Barley	plasma membrane	79.18	76.38
Os04t0373400-01	Rice	plasma membrane	68.37	69.36
GSMUA_Achr11P...	Banana	plasma membrane	64.49	64.75
Os10t0344900-01	Rice	plasma membrane	60.82	62.47
Os10t0345100-01	Rice	plasma membrane	60.82	62.21
VIT_17s0000g09270.t01	Wine grape	plasma membrane	54.08	59.15
Os10t0344500-00	Rice	plasma membrane, vacuole	59.18	55.88
PGSC0003DMT400046664	Potato	plasma membrane	53.47	55.27
Os06t0707100-01	Rice	plasma membrane	52.86	53.62
Solyc03g112250.1.1	Tomato	nucleus, peroxisome, plasma membrane	52.24	52.35
PGSC0003DMT400046666	Potato	plasma membrane	51.63	51.74
PGSC0003DMT400046656	Potato	plasma membrane	48.16	50.64
Os01t0684900-01	Rice	plasma membrane	49.59	49.49
Solyc03g112260.2.1	Tomato	plasma membrane	50.2	47.4
Os05t0554000-01	Rice	cytosol, peroxisome, plasma membrane	37.55	45.1
Os01t0504500-02	Rice	plasma membrane	45.51	44.42
Zm00001d045948_P002	Maize	nucleus, plasma membrane, vacuole	81.63	42.6
Os07t0108200-00	Rice	cytosol, peroxisome, plasma membrane	39.59	39.92
Os07t0502200-01	Rice	plasma membrane	38.78	39.42

Protein Annotations

MapMan:24.2.4.1.1	EntrezGene:4341093	EMBL:AK067594	ProteinID:BAD46531.1	ProteinID:BAF19601.1	ProteinID:BAS97884.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006855	GO:GO:0008150
GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:MATE_fam
EnsemblPlantsGene:Os06g0494400	EnsemblPlants:Os06t0494400-01	PFAM:PF01554	PANTHER:PTHR11206	PANTHER:PTHR11206:SF185	UniProt:Q651I6
TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI000043A5AA	RefSeq:XP_015641600.1	SEG:seg	:

Description

Multi antimicrobial extrusion protein MatE family protein. (Os06t0494400-01)

Coordinates

chr6:+:17194074..17200567

Molecular Weight (calculated)

52050.5 Da

IEP (calculated)

6.497

GRAVY (calculated)

0.792

Length

490 amino acids

Sequence
(BLAST)

001: MAAKGSPEEE ALLAGVGGDH QLVESDELAP AAAVVREEVK KQLWLAVPLV AGALLQNVIQ MISVMFVGHL GELPLAGASM ASSFASVTGL SLLLGMASAL
101: DTLCGQAFGS RQYHLLGVYK QRAMLLLTAV SVPLVVVWFY TGDILVAFGQ DADIAAEAGA YARWMIPALF AYGPLQCHVR FLQTQNVVLP VMASAGAAAL
201: CHLVVCWALV YAAGMGSKGA ALSNAVSYWI NVAILAVYVR VSSSCKKTWT GFSMEAFHDP LSFFRLAIPS ALMVCLEMWS FELIVLLSGI LPNPKLETSV
301: LSISLNTAAF VWMIPFGLGS AISTRVSNEL GAGRPRAARL AVRVVVFMAV SEGLVIGLVL VGVRYIWGHA YSDEEEVVTY VAKMMLVIAV SNFFDGIQCV
401: LSGVARGCGW QKIGACVNLG AYYIVGIPSA YLIAFVLHVG GMGLWLGIIC GLLVQVLLLM AITLCTNWDK EAANAKDRVF SSSLPSDLAT

Best Arabidopsis Sequence Match ( AT5G52450.1 )
(BLAST)

001: MRDDRERGEG DLSWPLIGEK SSVKEEVKKQ LWLSGPLIAV SLLQFCLQVI SVMFVGHLGS LPLSAASIAT SFASVTGFSF LMGTASALDT LCGQAYGAKK
101: YGMLGIQMQR AMFVLTLASI PLSIIWANTE HLLVFFGQNK SIATLAGSYA KFMIPSIFAY GLLQCFNRFL QAQNNVFPVV FCSGVTTSLH VLLCWVLVFK
201: SGLGFQGAAL ANSISYWLNV VLLFCYVKFS PSCSLTWTGF SKEALRDILP FLRLAVPSAL MVCLEMWSFE LLVLLSGLLP NPVLETSVLS ICLNTSGTMW
301: MIPFGLSGAA STRISNELGA GNPKVAKLAV RVVICIAVAE SIVIGSVLIL IRNIWGLAYS SELEVVSYVA SMMPILALGN FLDSLQCVLS GVARGCGWQK
401: IGAIINLGSY YLVGVPSGLL LAFHFHVGGR GLWLGIICAL VVQVFGLGLV TIFTNWDEEA KKATNRIESS SSVKDFAVDD RSVVVF

Arabidopsis Description

DTX16Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178UMN3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.