Factsheet for TraesCS2A01G278400.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plasma membrane
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G296000.1	Wheat	plasma membrane	98.75	98.75
TraesCS2D01G277400.1	Wheat	plasma membrane	98.33	98.33
TraesCS7A01G554500.1	Wheat	plasma membrane	86.46	88.3
TraesCS2A01G278500.1	Wheat	plasma membrane	85.21	86.65
HORVU2Hr1G068090.13	Barley	plastid	97.5	82.98
TraesCS5A01G368700.1	Wheat	plasma membrane	82.92	82.57
TraesCS5A01G368500.1	Wheat	plasma membrane	82.08	81.74
TraesCS5A01G368600.2	Wheat	plasma membrane	83.12	80.44
KXG26020	Sorghum	plasma membrane	78.33	78.33
TraesCS5A01G368800.1	Wheat	mitochondrion	75.62	77.56
Os04t0373400-01	Rice	plasma membrane	76.04	75.57
Zm00001d004055_P001	Maize	golgi, nucleus, plasma membrane	75.83	73.83
TraesCS3A01G029100.1	Wheat	plasma membrane	64.17	65.12
TraesCS7A01G230500.1	Wheat	plasma membrane	65.0	64.6
TraesCS7A01G230200.1	Wheat	cytosol, nucleus, plasma membrane	65.0	64.46
GSMUA_Achr11P...	Banana	plasma membrane	65.0	63.93
TraesCS3A01G055900.1	Wheat	plasma membrane	63.75	63.49
TraesCS7A01G230100.1	Wheat	cytosol, nucleus, peroxisome	63.75	63.35
TraesCS7A01G500700.1	Wheat	plasma membrane	60.83	61.47
TraesCS7A01G497300.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	60.21	61.23
TraesCS7A01G494300.1	Wheat	plasma membrane	60.21	60.84
VIT_17s0000g09270.t01	Wine grape	plasma membrane	56.04	60.04
TraesCS7A01G033200.1	Wheat	plasma membrane	56.46	57.05
PGSC0003DMT400046664	Potato	plasma membrane	54.58	55.27
Solyc03g112250.1.1	Tomato	nucleus, peroxisome, plasma membrane	54.38	53.37
TraesCS7A01G473200.1	Wheat	plasma membrane	52.5	53.16
TraesCS7A01G411800.1	Wheat	plasma membrane	53.33	52.78
PGSC0003DMT400046666	Potato	plasma membrane	51.88	50.92
PGSC0003DMT400046656	Potato	plasma membrane	48.54	50.0
TraesCS3A01G229400.1	Wheat	plasma membrane	41.46	49.87
TraesCS3A01G265100.1	Wheat	plasma membrane	49.58	49.28
Solyc03g112260.2.1	Tomato	plasma membrane	51.04	47.21
TraesCS1A01G380900.1	Wheat	plasma membrane	46.46	45.23
TraesCS2A01G202000.1	Wheat	plasma membrane	48.12	45.12
TraesCS1A01G032900.1	Wheat	plasma membrane	39.79	39.71
TraesCS6A01G350400.1	Wheat	plasma membrane	38.96	38.72
TraesCS2A01G261700.1	Wheat	plasma membrane	39.17	38.29
TraesCS2A01G139200.1	Wheat	plasma membrane	38.33	38.17

Protein Annotations

EnsemblPlants:TraesCS2A01G278400.1	EnsemblPlantsGene:TraesCS2A01G278400	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0055085
InterPro:MATE_fam	PANTHER:PTHR11206	PANTHER:PTHR11206:SF118	PFAM:PF01554	SEG:seg	TIGR:cd13132
TIGRFAMs:TIGR00797	TMHMM:TMhelix	MapMan:24.2.4.1.1	:	:	:

Description

No Description!

Coordinates

chr2A:+:461388278..461391815

Molecular Weight (calculated)

51960.8 Da

IEP (calculated)

8.514

GRAVY (calculated)

0.732

Length

480 amino acids

Sequence
(BLAST)

001: MLPNMEEPLV GGKSEKTGGP GESLLVIEVK KQLYLAGPLV VGSLLQNVVQ MISVMFVGHL GELDLSSASI ATSFAGVTGF SLLAGMSSSL DTLCGQAFGA
101: KQYHLLGIYK QRAILVLTPL SVVVAVIWAY TGQILLFFGQ DPEIAMGAGS YIRWMIPALF VYGPLQCHVR FLQTQNIVLP VMLSSGVTAL NHILVCWLLV
201: YKLGLGNKGA ALANTISYLT NLLILALYIR LSPSCKRTWT GLSMEAFRDI LSFLRLAVPS ALMVCLEWWS FELLVLFSGF LPNPKLEASV LSISLNTLSL
301: VFRIPSGLGA AISTRVSNEL GAGRPDAARL ATYVIMVLGL VSSVSVGLAI ILVRNLWGYA YSNEKEVVEY IARMMPILAV TFLFDDLQCV LSGIVRGCGF
401: QKIGAYVNLS AYYLVGIPAA LYFAFVYHLG GMGLWFGLTC GLVVQTVLLL SITLRTNWDK EALKAKDRVF SSSLPLDLAT

Best Arabidopsis Sequence Match ( AT2G34360.1 )
(BLAST)

001: MREEREDMLS WPLIGEKEKR SRFVKEEVEK QLLLSGPLIA VSLLQFCLQI ISVMFVGHLG SLPLSAASIA TSFASVTGFT FLMGTASAMD TVCGQSYGAK
101: MYGMLGIQMQ RAMLVLTLLS VPLSIVWANT EHFLVFFGQD KSIAHLSGSY ARFMIPSIFA YGLLQCLNRF LQAQNNVIPV VICSGVTTSL HVIICWVLVL
201: KSGLGFRGAA VANAISYWLN VILLSCYVKF SPSCSLTWTG FSKEARRDII PFMKLVIPSA FMVCSLEMWS FELLVLSSGL LPNPVLETSC PRTVWMIPFG
301: LSGAASTRVS NELGSGNPKG AKLAVRVVLS FSIVESILVG TVLILIRKIW GFAYSSDPEV VSHVASMLPI LALGHSLDSF QTVLSGVARG CGWQKIGAFV
401: NLGSYYLVGV PFGLLLGFHF HVGGRGLWLG IICALIVQGV CLSLITFFTN WDEEVKKATS RAKSSSEVKE FAVDNGSILV

Arabidopsis Description

DTX15Protein DETOXIFICATION 15 [Source:UniProtKB/Swiss-Prot;Acc:F4IHU9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.