Factsheet for TraesCS3A01G055900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

peroxisome 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G230100.1	Wheat	cytosol, nucleus, peroxisome	83.61	83.44
TraesCS3D01G056000.1	Wheat	cytosol, nucleus, peroxisome, plastid	94.19	79.09
TraesCS7A01G230200.1	Wheat	cytosol, nucleus, plasma membrane	77.18	76.86
Os06t0495500-01	Rice	plasma membrane	73.44	73.9
TraesCS7A01G230500.1	Wheat	plasma membrane	72.82	72.67
TraesCS3B01G068700.1	Wheat	cytosol, nucleus, peroxisome, plastid	81.74	67.35
TraesCS2A01G278500.1	Wheat	plasma membrane	64.73	66.1
TraesCS5A01G368700.1	Wheat	plasma membrane	64.32	64.32
TraesCS5A01G368500.1	Wheat	plasma membrane	63.9	63.9
TraesCS2A01G278400.1	Wheat	plasma membrane	63.49	63.75
GSMUA_Achr11P...	Banana	plasma membrane	62.86	62.09
TraesCS7A01G554500.1	Wheat	plasma membrane	60.37	61.91
TraesCS5A01G368600.2	Wheat	plasma membrane	63.49	61.69
TraesCS3A01G029100.1	Wheat	plasma membrane	58.71	59.83
TraesCS5A01G368800.1	Wheat	mitochondrion	57.47	59.19
TraesCS7A01G497300.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	57.47	58.69
TraesCS7A01G494300.1	Wheat	plasma membrane	57.26	58.11
TraesCS7A01G033200.1	Wheat	plasma membrane	56.64	57.47
TraesCS7A01G500700.1	Wheat	plasma membrane	56.02	56.84
VIT_17s0000g09270.t01	Wine grape	plasma membrane	52.49	56.47
TraesCS3A01G229400.1	Wheat	plasma membrane	42.74	51.63
TraesCS7A01G473200.1	Wheat	plasma membrane	50.62	51.48
TraesCS7A01G411800.1	Wheat	plasma membrane	51.66	51.34
PGSC0003DMT400046664	Potato	plasma membrane	50.21	51.05
TraesCS3A01G265100.1	Wheat	plasma membrane	48.96	48.86
Solyc03g112250.1.1	Tomato	nucleus, peroxisome, plasma membrane	49.38	48.67
PGSC0003DMT400046656	Potato	plasma membrane	45.64	47.21
PGSC0003DMT400046666	Potato	plasma membrane	47.72	47.03
TraesCS1A01G380900.1	Wheat	plasma membrane	46.27	45.23
Solyc03g112260.2.1	Tomato	plasma membrane	47.93	44.51
TraesCS2A01G202000.1	Wheat	plasma membrane	47.1	44.34
TraesCS2A01G261700.1	Wheat	plasma membrane	39.0	38.29
TraesCS2A01G139200.1	Wheat	plasma membrane	38.17	38.17
TraesCS6A01G350400.1	Wheat	plasma membrane	37.97	37.89
TraesCS1A01G032900.1	Wheat	plasma membrane	37.76	37.84

Protein Annotations

EnsemblPlants:TraesCS3A01G055900.1	EnsemblPlantsGene:TraesCS3A01G055900	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0055085
InterPro:MATE_fam	PANTHER:PTHR11206	PANTHER:PTHR11206:SF185	PFAM:PF01554	SEG:seg	TIGR:cd13132
TIGRFAMs:TIGR00797	TMHMM:TMhelix	MapMan:24.2.4.1.1	:	:	:

Description

No Description!

Coordinates

chr3A:-:32224350..32234406

Molecular Weight (calculated)

52288.3 Da

IEP (calculated)

8.526

GRAVY (calculated)

0.715

Length

482 amino acids

Sequence
(BLAST)

001: MPRSRGCKEL GGESLAVGAE VKRQLWLAGP LVVGSLMQNL IQTISVMFVG HLGELPLAGA SMATSFATVT GFSLLTGMAN ALDTLCGQAF GAGQYHLLGI
101: YKQRAMLLLT VASIPVAIMW FYTGQIMLLF GQDPEIAMEA GTYARWMIPG LFGYGLLQCH VRFLQSQNTV LPVMVSAGAA ALFHLFACWL LVYVAEMGSK
201: GAALSTAVSY WVYVILLAMY VRVSSSCKQT WTGFSMQAFH GVHDFLRLAV PSALMLCLEW WSFEILVLLS GLLPNPKLET SVLSITLNTA NCLFMIPYGL
301: GAAISTRVSN ELGAGRPRAA RLAVHVAMFL AISEGTVMAA VVLRVRYIWG HAYSSEEEVV SYVARMLLVI LVVNFFDGIQ CVLSGVARGC GWQKICAFIN
401: LGAFYIVGVP AAYIIAFVLH VGGMGLWMGI ICGVLVQVLL LTIITLCTDW QKEATKAKKR VFSSSVPTDR STHDMKISME VK

Best Arabidopsis Sequence Match ( AT1G15150.1 )
(BLAST)

001: MQDAERTTND PVDRIEKVTW RDLQDGSFTA ELKRLICFAA PMAAVVIIQF MIQIISMVMV GHLGRLSLAS ASFAVSFCNV TGFSFIIGLS CALDTLSGQA
101: YGAKLYRKLG VQAYTAMFCL TLVCLPLSLL WFNMGKLIVI LGQDPAIAHE AGRYAAWLIP GLFAYAVLQP LIRYFKNQSL ITPLLVTSSV VFCIHVPLCW
201: LLVYKSGLGH IGGALALSLS YWLYAIFLGS FMYYSSACSE TRAPLTMEIF EGVREFIKYA LPSAAMLCLE WWSYELIILL SGLLPNPQLE TSVLSICFET
301: LSITYSIPLA IAAAASTRIS NELGAGNSRA AHIVVYAAMS LAVMDALMVS MSLLAGRHVF GHVFSSDKKT IEYVAKMAPL VSISIILDSL QGVLSGVASG
401: CGWQHIGAYI NFGAFYLWGI PIAASLAFWV HLKGVGLWIG ILAGAVLQTL LLALVTGCTN WKTQAREARE RMAVAHESEL TESELPI

Arabidopsis Description

DTX10Protein DETOXIFICATION 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYL8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.