Factsheet for TraesCS7A01G230200.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, nucleus, plasma membrane
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G230800.1	Wheat	cytosol, nucleus, plasma membrane	97.93	97.93
TraesCS7B01G196100.1	Wheat	cytosol, nucleus, plasma membrane	97.73	97.73
Os06t0495500-01	Rice	plasma membrane	81.2	82.05
TraesCS7A01G230100.1	Wheat	cytosol, nucleus, peroxisome	77.48	77.64
TraesCS7A01G230500.1	Wheat	plasma membrane	77.07	77.23
TraesCS3A01G055900.1	Wheat	plasma membrane	76.86	77.18
HORVU7Hr1G047070.3	Barley	mitochondrion	87.4	77.05
TraesCS2A01G278500.1	Wheat	plasma membrane	66.94	68.64
TraesCS5A01G368700.1	Wheat	plasma membrane	67.56	67.84
TraesCS5A01G368500.1	Wheat	plasma membrane	65.29	65.56
TraesCS5A01G368600.2	Wheat	plasma membrane	67.15	65.52
TraesCS2A01G278400.1	Wheat	plasma membrane	64.46	65.0
GSMUA_Achr11P...	Banana	plasma membrane	65.29	64.75
TraesCS7A01G554500.1	Wheat	plasma membrane	61.98	63.83
TraesCS3A01G029100.1	Wheat	plasma membrane	61.36	62.79
TraesCS5A01G368800.1	Wheat	mitochondrion	60.33	62.39
TraesCS7A01G033200.1	Wheat	plasma membrane	60.95	62.11
TraesCS7A01G497300.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	59.92	61.44
TraesCS7A01G500700.1	Wheat	plasma membrane	59.71	60.84
TraesCS7A01G494300.1	Wheat	plasma membrane	59.71	60.84
VIT_17s0000g09270.t01	Wine grape	plasma membrane	52.89	57.14
TraesCS7A01G473200.1	Wheat	plasma membrane	53.72	54.85
PGSC0003DMT400046664	Potato	plasma membrane	51.65	52.74
TraesCS7A01G411800.1	Wheat	plasma membrane	52.48	52.37
TraesCS3A01G229400.1	Wheat	plasma membrane	42.56	51.63
Solyc03g112250.1.1	Tomato	nucleus, peroxisome, plasma membrane	50.83	50.31
PGSC0003DMT400046666	Potato	plasma membrane	49.59	49.08
PGSC0003DMT400046656	Potato	plasma membrane	47.11	48.93
TraesCS3A01G265100.1	Wheat	plasma membrane	48.35	48.45
Solyc03g112260.2.1	Tomato	plasma membrane	49.79	46.44
TraesCS2A01G202000.1	Wheat	plasma membrane	48.35	45.7
TraesCS1A01G380900.1	Wheat	plasma membrane	46.28	45.44
TraesCS1A01G032900.1	Wheat	plasma membrane	39.05	39.29
TraesCS2A01G139200.1	Wheat	plasma membrane	38.02	38.17
TraesCS6A01G350400.1	Wheat	plasma membrane	38.02	38.1
TraesCS2A01G261700.1	Wheat	plasma membrane	38.02	37.47

Protein Annotations

EnsemblPlants:TraesCS7A01G230200.1	EnsemblPlantsGene:TraesCS7A01G230200	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0055085
InterPro:MATE_fam	PANTHER:PTHR11206	PANTHER:PTHR11206:SF185	PFAM:PF01554	SEG:seg	TIGR:cd13132
TIGRFAMs:TIGR00797	TMHMM:TMhelix	MapMan:24.2.4.1.1	:	:	:

Description

No Description!

Coordinates

chr7A:-:200624571..200634450

Molecular Weight (calculated)

52244.0 Da

IEP (calculated)

7.122

GRAVY (calculated)

0.785

Length

484 amino acids

Sequence
(BLAST)

001: MEKASLEEAL LPRSPVCKEL GEDESLAVGD EVKRQLWLAG PLIAGCLMQN LIQMISVMFV GHLGELPLAG ASMASSFAAV TGFSLLLGMA TALDTLCGQA
101: FGARQYHLLG IYKQRAMVVL TAASVPLAVV WFYTGEILLL FGQDPDIAAE AGTYARWMIP ALFAFGLLQC HVRFLQTQNI VLPVMLSAAA TALCHLVVCW
201: LLVYVLGLSS KGAAIGNAVS YWINVVILAV YVRVSSSCKK TWTGFSMEAF HDQLSFFRLA VPSALMVCLE WWSFETLVLL SGLLPNPKLE TSVLSITLNT
301: ANCLFMIPYG LGATISTRVS NELGAGRPGA ARLAVRVVMF FAILEGLIMG VVLVSVRRVW GHAYSDEEEV VTYVAKMVLV IAVSNFLDGI QSVLSGVARG
401: CGWQKICACI NLGAFYAVGI PAAYLLAFVL HVGGMGLWIG IIFGILVQVL LFVAITLCTD WHKEATKAKN RVFTSSLPTD LLEK

Best Arabidopsis Sequence Match ( AT1G73700.1 )
(BLAST)

001: MEDGVTPPLL ITEKDTTMIR VKEEVKKQLW LSAPLIGVSL LQYSLQVISV MFVGHLGSLP LSAASIATSF ASVTGFTFLL GTASALETLC GQAYGAKLYG
101: KLGIQMQRAM FVLLILSVPL SIIWANTEQI LVLVHQDKSI ASVAGSYAKY MIPSLFAYGL LQCINRFLQA QNNVFPVFVC SGITTCLHLL LCWLFVLKTG
201: LGYRGAALAI SVSYWFNVIL LSCYVKFSPS CSHSWTGFSK EAFQELYDFS KIAFPSAVMV CLELWSFELL VLASGLLPNP VLETSVLSIC LNTSLTIWQI
301: SVGLGGAASI RVSNELGAGN PQVAKLAVYV IVGIAVAEGI VVVTVLLSIR KILGHAFSSD PKIIAYAASM IPIVACGNFL DGLQCVLSGV ARGCGWQKIG
401: ACVNLGSYYL VGVPLGLLLG FHFHIGGRGL WLGIVTALSV QVLCLSLVTI FTNWDKEAKK ATNRVGSSDD KDGDVQ

Arabidopsis Description

DTX17Protein DETOXIFICATION 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9U1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.