Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 4
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G01770.1 | CDX78905 | AT4G19030.1 | 21798944 |
| AT2G01770.1 | CDX98596 | AT4G19030.1 | 21798944 |
| AT2G01770.1 | CDX99411 | AT4G19030.1 | 21798944 |
| AT2G01770.1 | CDY01565 | AT4G19030.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17642 | Canola | cytosol | 82.08 | 83.53 |
| Bra026634.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 96.53 | 66.8 |
| CDY64568 | Canola | cytosol, peroxisome, plasma membrane | 96.53 | 66.8 |
| HORVU7Hr1G097360.1 | Barley | cytosol, endoplasmic reticulum, peroxisome | 56.07 | 62.58 |
| AT2G01770.1 | Thale cress | cytosol, peroxisome, plasma membrane | 87.86 | 60.8 |
| Solyc04g008060.2.1 | Tomato | plasma membrane | 75.72 | 54.81 |
| PGSC0003DMT400075781 | Potato | plasma membrane | 75.72 | 54.81 |
| KRH41739 | Soybean | cytosol | 76.3 | 54.55 |
| KRH60441 | Soybean | cytosol | 76.3 | 53.44 |
| VIT_01s0011g06010.t01 | Wine grape | cytosol | 70.52 | 49.8 |
| VIT_01s0011g06000.t01 | Wine grape | plasma membrane | 69.94 | 49.39 |
| TraesCS7D01G413000.1 | Wheat | cytosol, peroxisome, plasma membrane | 69.94 | 49.39 |
| EES12303 | Sorghum | mitochondrion, nucleus, peroxisome | 69.94 | 49.19 |
| GSMUA_Achr7P12420_001 | Banana | cytosol | 71.68 | 49.01 |
| Os04t0463400-01 | Rice | cytosol | 71.1 | 48.81 |
| TraesCS2A01G336600.1 | Wheat | cytosol, peroxisome, plasma membrane | 68.21 | 47.97 |
| TraesCS2B01G345300.1 | Wheat | cytosol, peroxisome, plasma membrane | 68.21 | 47.97 |
| TraesCS2D01G326300.1 | Wheat | cytosol | 67.63 | 47.18 |
| Os09t0396900-02 | Rice | plasma membrane | 67.05 | 47.15 |
| GSMUA_Achr9P27290_001 | Banana | cytosol | 68.79 | 46.48 |
| Zm00001d025623_P001 | Maize | cytosol, peroxisome, plasma membrane | 65.9 | 46.34 |
| TraesCS7A01G420900.1 | Wheat | cytosol, peroxisome, plasma membrane | 56.65 | 44.95 |
| HORVU5Hr1G060370.2 | Barley | cytosol | 62.43 | 44.08 |
| HORVU4Hr1G031840.1 | Barley | cytosol | 62.43 | 44.08 |
| TraesCS5B01G202100.1 | Wheat | cytosol | 62.43 | 44.08 |
| Zm00001d020395_P002 | Maize | plasma membrane | 63.58 | 43.82 |
| TraesCS5A01G203400.1 | Wheat | cytosol | 61.85 | 43.67 |
| EER96705 | Sorghum | cytosol | 63.01 | 43.43 |
| TraesCS5D01G209900.2 | Wheat | cytosol | 62.43 | 42.19 |
| HORVU2Hr1G080870.6 | Barley | mitochondrion, plastid | 68.21 | 37.7 |
| Zm00001d005715_P004 | Maize | plasma membrane | 63.01 | 28.39 |
Protein Annotations
| EnsemblPlants:CDY09418 | EnsemblPlantsGene:GSBRNA2T00030910001 | GO:A0A078FBU7 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Ccc1_fam | ncoils:Coil | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF9 | PFAM:PF01988 | ProteinID:CDY09418 |
| ProteinID:CDY09418.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EF2DB9 | UniProt:A0A078FBU7 | MapMan:24.2.12.1 |
| MapMan:25.4.5.3 | : | : | : | : | : |
Description
BnaA02g25920DBnaA02g25920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FBU7]
Coordinates
chrLK031995:+:803061..804387
Molecular Weight (calculated)
19079.2 Da
IEP (calculated)
6.104
GRAVY (calculated)
0.305
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MQLFCLTSYL AAKSEADHYA REMKREQEEI VAVPETEAAE VAEILAQYGV EPHEYSPVVN ALRKNPQAWL DFMMRFELGL EKPDPKRALQ SAFTIAIAYV
101: LGGLVPLFPY MFIPQALNAV VASAAITLIA LFIFGYAKGH FTGSRPFRSA FETTFIGAIA SAAAFCLAKV VQH
101: LGGLVPLFPY MFIPQALNAV VASAAITLIA LFIFGYAKGH FTGSRPFRSA FETTFIGAIA SAAAFCLAKV VQH
001: MSSEEDKITR ISIEPEKQTL LDHHTEKHFT AGEIVRDIII GVSDGLTVPF ALAAGLSGAN ASSSIVLTAG IAEVAAGAIS MGLGGYLAAK SEEDHYAREM
101: KREQEEIVAV PETEAAEVAE ILAQYGIEPH EYSPVVNALR KNPQAWLDFM MRFELGLEKP DPKRALQSAF TIAIAYVLGG FIPLLPYMLI PHAMDAVVAS
201: VVITLFALFI FGYAKGHFTG SKPLRSAFET AFIGAIASAA AFCLAKVVQH
101: KREQEEIVAV PETEAAEVAE ILAQYGIEPH EYSPVVNALR KNPQAWLDFM MRFELGLEKP DPKRALQSAF TIAIAYVLGG FIPLLPYMLI PHAMDAVVAS
201: VVITLFALFI FGYAKGHFTG SKPLRSAFET AFIGAIASAA AFCLAKVVQH
Arabidopsis Description
VIT1Vacuolar iron transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUA5]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.