Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 2
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_10s0003g01830.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G01770.1 | VIT_10s0003g01830.t01 | AT4G19030.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0011g06000.t01 | Wine grape | plasma membrane | 78.78 | 78.78 |
| Solyc04g008060.2.1 | Tomato | plasma membrane | 76.33 | 78.24 |
| PGSC0003DMT400075781 | Potato | plasma membrane | 76.33 | 78.24 |
| KRH41739 | Soybean | cytosol | 73.47 | 74.38 |
| KRH60441 | Soybean | cytosol | 73.47 | 72.87 |
| GSMUA_Achr7P12420_001 | Banana | cytosol | 74.69 | 72.33 |
| EES12303 | Sorghum | mitochondrion, nucleus, peroxisome | 72.24 | 71.95 |
| Os09t0396900-02 | Rice | plasma membrane | 72.24 | 71.95 |
| Os04t0463400-01 | Rice | cytosol | 73.06 | 71.03 |
| CDY64568 | Canola | cytosol, peroxisome, plasma membrane | 72.24 | 70.8 |
| Bra026634.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 72.24 | 70.8 |
| TraesCS2B01G345300.1 | Wheat | cytosol, peroxisome, plasma membrane | 71.02 | 70.73 |
| TraesCS2A01G336600.1 | Wheat | cytosol, peroxisome, plasma membrane | 71.02 | 70.73 |
| TraesCS5A01G203400.1 | Wheat | cytosol | 70.61 | 70.61 |
| CDY17642 | Canola | cytosol | 48.98 | 70.59 |
| CDY09418 | Canola | plasma membrane | 49.8 | 70.52 |
| HORVU4Hr1G031840.1 | Barley | cytosol | 70.2 | 70.2 |
| HORVU5Hr1G060370.2 | Barley | cytosol | 70.2 | 70.2 |
| TraesCS5B01G202100.1 | Wheat | cytosol | 70.2 | 70.2 |
| Zm00001d025623_P001 | Maize | cytosol, peroxisome, plasma membrane | 70.2 | 69.92 |
| TraesCS7D01G413000.1 | Wheat | cytosol, peroxisome, plasma membrane | 69.8 | 69.8 |
| TraesCS2D01G326300.1 | Wheat | cytosol | 70.61 | 69.76 |
| Zm00001d020395_P002 | Maize | plasma membrane | 71.02 | 69.32 |
| TraesCS7A01G420900.1 | Wheat | cytosol, peroxisome, plasma membrane | 61.63 | 69.27 |
| AT2G01770.1 | Thale cress | cytosol, peroxisome, plasma membrane | 70.61 | 69.2 |
| EER96705 | Sorghum | cytosol | 70.61 | 68.92 |
| Bra024856.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 69.8 | 68.4 |
| GSMUA_Achr9P27290_001 | Banana | cytosol | 71.43 | 68.36 |
| TraesCS5D01G209900.2 | Wheat | cytosol | 70.2 | 67.19 |
| HORVU7Hr1G097360.1 | Barley | cytosol, endoplasmic reticulum, peroxisome | 40.41 | 63.87 |
| HORVU2Hr1G080870.6 | Barley | mitochondrion, plastid | 71.02 | 55.59 |
| Zm00001d005715_P004 | Maize | plasma membrane | 70.61 | 45.05 |
| VIT_15s0048g01070.t01 | Wine grape | nucleus, peroxisome, plasma membrane | 23.27 | 21.59 |
Protein Annotations
| EntrezGene:100262710 | wikigene:100262710 | MapMan:24.2.12.1 | MapMan:25.4.5.3 | EMBL:AM445940 | ProteinID:CAN74146 |
| ProteinID:CAN74146.1 | ProteinID:CBI26807 | ProteinID:CBI26807.3 | InterPro:Ccc1_fam | ncoils:Coil | UniProt:D7T8I6 |
| EMBL:FN595752 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005381 | GO:GO:0005384 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0006810 |
| GO:GO:0006880 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 |
| GO:GO:0030026 | GO:GO:0034755 | GO:GO:0071281 | GO:GO:0071421 | EntrezGene:LOC100262710 | wikigene:LOC100262710 |
| PFAM:PF01988 | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF9 | TMHMM:TMhelix | UniParc:UPI00015C8C6B | ArrayExpress:VIT_01s0011g06010 |
| EnsemblPlantsGene:VIT_01s0011g06010 | EnsemblPlants:VIT_01s0011g06010.t01 | RefSeq:XP_002281480 | RefSeq:XP_002281480.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr1:-:5765341..5767653
Molecular Weight (calculated)
26274.0 Da
IEP (calculated)
4.943
GRAVY (calculated)
0.347
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MAENGSADVE KQKLLLHQHE EKHFMSSEVV RDIIIGVSDG LTVPFALAAG LSGASASSSI ILTAGIAEVA AGSISMGLGG YLAAKSEADH YMRELKREQE
101: EIITVPDMEA AEIGEILEQY GVEPHEYGPV VDALRRNPQA WLDFMMKFEL GLEKPNPRRA LQSALTIAVS YIMGGLVPLI PYMFIPIARE AVIASVILTL
201: LALLVFGFAK GYFTGNKPFS SALQTAFIGA LASAAAFTFA KLVRA
101: EIITVPDMEA AEIGEILEQY GVEPHEYGPV VDALRRNPQA WLDFMMKFEL GLEKPNPRRA LQSALTIAVS YIMGGLVPLI PYMFIPIARE AVIASVILTL
201: LALLVFGFAK GYFTGNKPFS SALQTAFIGA LASAAAFTFA KLVRA
001: MSSEEDKITR ISIEPEKQTL LDHHTEKHFT AGEIVRDIII GVSDGLTVPF ALAAGLSGAN ASSSIVLTAG IAEVAAGAIS MGLGGYLAAK SEEDHYAREM
101: KREQEEIVAV PETEAAEVAE ILAQYGIEPH EYSPVVNALR KNPQAWLDFM MRFELGLEKP DPKRALQSAF TIAIAYVLGG FIPLLPYMLI PHAMDAVVAS
201: VVITLFALFI FGYAKGHFTG SKPLRSAFET AFIGAIASAA AFCLAKVVQH
101: KREQEEIVAV PETEAAEVAE ILAQYGIEPH EYSPVVNALR KNPQAWLDFM MRFELGLEKP DPKRALQSAF TIAIAYVLGG FIPLLPYMLI PHAMDAVVAS
201: VVITLFALFI FGYAKGHFTG SKPLRSAFET AFIGAIASAA AFCLAKVVQH
Arabidopsis Description
VIT1Vacuolar iron transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUA5]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.