Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G345300.1 | Wheat | cytosol, peroxisome, plasma membrane | 97.98 | 98.78 |
| TraesCS2A01G336600.1 | Wheat | cytosol, peroxisome, plasma membrane | 97.58 | 98.37 |
| EES12303 | Sorghum | mitochondrion, nucleus, peroxisome | 87.9 | 88.62 |
| Zm00001d025623_P001 | Maize | cytosol, peroxisome, plasma membrane | 85.48 | 86.18 |
| Os04t0463400-01 | Rice | cytosol | 85.48 | 84.13 |
| TraesCS7D01G413000.1 | Wheat | cytosol, peroxisome, plasma membrane | 80.24 | 81.22 |
| HORVU2Hr1G080870.6 | Barley | mitochondrion, plastid | 97.18 | 77.0 |
| TraesCS5D01G209900.2 | Wheat | cytosol | 75.0 | 72.66 |
| GSMUA_Achr9P27290_001 | Banana | cytosol | 74.19 | 71.88 |
| PGSC0003DMT400075781 | Potato | plasma membrane | 68.55 | 71.13 |
| Solyc04g008060.2.1 | Tomato | plasma membrane | 68.55 | 71.13 |
| KRH41739 | Soybean | cytosol | 68.95 | 70.66 |
| VIT_01s0011g06000.t01 | Wine grape | plasma membrane | 69.76 | 70.61 |
| VIT_01s0011g06010.t01 | Wine grape | cytosol | 69.76 | 70.61 |
| CDY64568 | Canola | cytosol, peroxisome, plasma membrane | 68.95 | 68.4 |
| Bra026634.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 68.95 | 68.4 |
| KRH60441 | Soybean | cytosol | 67.74 | 68.02 |
| CDY09418 | Canola | plasma membrane | 47.18 | 67.63 |
| AT2G01770.1 | Thale cress | cytosol, peroxisome, plasma membrane | 66.53 | 66.0 |
| CDY17642 | Canola | cytosol | 45.16 | 65.88 |
| Bra024856.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 64.11 | 63.6 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G326300.1 | EnsemblPlantsGene:TraesCS2D01G326300 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005381 | GO:GO:0006810 |
| GO:GO:0008150 | InterPro:Ccc1_fam | ncoils:Coil | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF19 | PFAM:PF01988 |
| SEG:seg | TIGR:cd02435 | TMHMM:TMhelix | MapMan:24.2.12.1 | MapMan:25.4.5.3 | : |
Description
No Description!
Coordinates
chr2D:-:419781681..419783650
Molecular Weight (calculated)
26389.0 Da
IEP (calculated)
5.314
GRAVY (calculated)
0.142
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGHGHGDGR QPMLEKGPPS HRERHFTAGE VVRDVIMGVS DGLTVPFALA AGLSGASAPS SLVLTAGLAE VAAGAISMGL GGYLAAQSEA DHYKREMKRE
101: QDEIIAVPDT EAAEIGDIMA EYGLEPHEYG PVVEGLRRNP QAWLEFMMRF ELGLEKPDPR RALQSALTIA LSYIIGGLVP LLPYMFISTV QDAMLTSVGV
201: TLLALLFFGY IKGRFTGNRP FLSAVQTTII GAVASAAAYG MAKAVQAR
101: QDEIIAVPDT EAAEIGDIMA EYGLEPHEYG PVVEGLRRNP QAWLEFMMRF ELGLEKPDPR RALQSALTIA LSYIIGGLVP LLPYMFISTV QDAMLTSVGV
201: TLLALLFFGY IKGRFTGNRP FLSAVQTTII GAVASAAAYG MAKAVQAR
001: MSSEEDKITR ISIEPEKQTL LDHHTEKHFT AGEIVRDIII GVSDGLTVPF ALAAGLSGAN ASSSIVLTAG IAEVAAGAIS MGLGGYLAAK SEEDHYAREM
101: KREQEEIVAV PETEAAEVAE ILAQYGIEPH EYSPVVNALR KNPQAWLDFM MRFELGLEKP DPKRALQSAF TIAIAYVLGG FIPLLPYMLI PHAMDAVVAS
201: VVITLFALFI FGYAKGHFTG SKPLRSAFET AFIGAIASAA AFCLAKVVQH
101: KREQEEIVAV PETEAAEVAE ILAQYGIEPH EYSPVVNALR KNPQAWLDFM MRFELGLEKP DPKRALQSAF TIAIAYVLGG FIPLLPYMLI PHAMDAVVAS
201: VVITLFALFI FGYAKGHFTG SKPLRSAFET AFIGAIASAA AFCLAKVVQH
Arabidopsis Description
VIT1Vacuolar iron transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUA5]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.