Factsheet for HORVU2Hr1G080870.6

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G01770.1	HORVU7Hr1G088900.1	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G345300.1	Wheat	cytosol, peroxisome, plasma membrane	77.96	99.19
TraesCS2A01G336600.1	Wheat	cytosol, peroxisome, plasma membrane	77.64	98.78
TraesCS2D01G326300.1	Wheat	cytosol	77.0	97.18
EES12303	Sorghum	mitochondrion, nucleus, peroxisome	69.65	88.62
Zm00001d025623_P001	Maize	cytosol, peroxisome, plasma membrane	67.41	85.77
Os04t0463400-01	Rice	cytosol	67.73	84.13
HORVU7Hr1G097360.1	Barley	cytosol, endoplasmic reticulum, peroxisome	37.38	75.48
HORVU4Hr1G031840.1	Barley	cytosol	58.47	74.69
HORVU5Hr1G060370.2	Barley	cytosol	58.47	74.69
GSMUA_Achr9P27290_001	Banana	cytosol	58.79	71.88
Solyc04g008060.2.1	Tomato	plasma membrane	54.31	71.13
PGSC0003DMT400075781	Potato	plasma membrane	54.31	71.13
KRH41739	Soybean	cytosol	54.95	71.07
VIT_01s0011g06010.t01	Wine grape	cytosol	55.59	71.02
VIT_01s0011g06000.t01	Wine grape	plasma membrane	55.27	70.61
KRH60441	Soybean	cytosol	54.31	68.83
CDY09418	Canola	plasma membrane	37.7	68.21
CDY64568	Canola	cytosol, peroxisome, plasma membrane	54.31	68.0
Bra026634.1-P	Field mustard	cytosol, peroxisome, plasma membrane	54.31	68.0
AT2G01770.1	Thale cress	cytosol, peroxisome, plasma membrane	52.72	66.0
CDY17642	Canola	cytosol	35.78	65.88
Bra024856.1-P	Field mustard	cytosol, peroxisome, plasma membrane	50.8	63.6

Protein Annotations

EnsemblPlants:HORVU2Hr1G080870.6	EnsemblPlantsGene:HORVU2Hr1G080870	GO:GO:0003674	GO:GO:0005215	GO:GO:0005381	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:Ccc1_fam	ncoils:Coil
PANTHER:PTHR31851	PANTHER:PTHR31851:SF19	PFAM:PF01988	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B464336
UniProt:A0A287IM13	MapMan:24.2.12.1	MapMan:25.4.5.3	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:586101010..586103171

Molecular Weight (calculated)

33590.7 Da

IEP (calculated)

9.055

GRAVY (calculated)

-0.025

Length

313 amino acids

Sequence
(BLAST)

001: CRLKPPTLFS QKNKSKITAS INSDSDRTRR ESNAPYLQPP FPSTCPPPSR LSARFCLLPS RARAAAAMDG HGDGRQPMLG KGPPSHRERH FTAGEVVRDV
101: IMGVSDGLTV PFALAAGLSG ASAPSSLVLT AGLAEVAAGA ISMGLGRYLA AQSEADHYKR EMKREQEEII AVPDTEAAEI GDIMAEYGLE PHEYGPVVEG
201: LRRNPQAWLE FMMRFELGLE KPDPRRALQS ALTIALSYII GGLVPLLPYM FISTVQDAML TSVGVTLLAL LFFGYIKGRF TGNRPFLSAV QTTIIGAVAS
301: AAAYGMAKAV QAR

Best Arabidopsis Sequence Match ( AT2G01770.1 )
(BLAST)

001: MSSEEDKITR ISIEPEKQTL LDHHTEKHFT AGEIVRDIII GVSDGLTVPF ALAAGLSGAN ASSSIVLTAG IAEVAAGAIS MGLGGYLAAK SEEDHYAREM
101: KREQEEIVAV PETEAAEVAE ILAQYGIEPH EYSPVVNALR KNPQAWLDFM MRFELGLEKP DPKRALQSAF TIAIAYVLGG FIPLLPYMLI PHAMDAVVAS
201: VVITLFALFI FGYAKGHFTG SKPLRSAFET AFIGAIASAA AFCLAKVVQH

Arabidopsis Description

VIT1Vacuolar iron transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUA5]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.