Factsheet for TraesCS2B01G345300.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G336600.1	Wheat	cytosol, peroxisome, plasma membrane	99.59	99.59
TraesCS2D01G326300.1	Wheat	cytosol	98.78	97.98
EES12303	Sorghum	mitochondrion, nucleus, peroxisome	89.02	89.02
Zm00001d025623_P001	Maize	cytosol, peroxisome, plasma membrane	86.59	86.59
Os04t0463400-01	Rice	cytosol	86.59	84.52
HORVU2Hr1G080870.6	Barley	mitochondrion, plastid	99.19	77.96
TraesCS5B01G202100.1	Wheat	cytosol	74.8	75.1
GSMUA_Achr9P27290_001	Banana	cytosol	74.8	71.88
PGSC0003DMT400075781	Potato	plasma membrane	69.51	71.55
Solyc04g008060.2.1	Tomato	plasma membrane	69.51	71.55
KRH41739	Soybean	cytosol	70.33	71.49
VIT_01s0011g06010.t01	Wine grape	cytosol	70.73	71.02
VIT_01s0011g06000.t01	Wine grape	plasma membrane	70.73	71.02
KRH60441	Soybean	cytosol	68.7	68.42
CDY64568	Canola	cytosol, peroxisome, plasma membrane	69.51	68.4
Bra026634.1-P	Field mustard	cytosol, peroxisome, plasma membrane	69.51	68.4
CDY09418	Canola	plasma membrane	47.97	68.21
CDY17642	Canola	cytosol	45.94	66.47
AT2G01770.1	Thale cress	cytosol, peroxisome, plasma membrane	67.48	66.4
Bra024856.1-P	Field mustard	cytosol, peroxisome, plasma membrane	65.04	64.0

Protein Annotations

EnsemblPlants:TraesCS2B01G345300.1	EnsemblPlantsGene:TraesCS2B01G345300	GO:GO:0003674	GO:GO:0005215	GO:GO:0005381	GO:GO:0006810
GO:GO:0008150	InterPro:Ccc1_fam	ncoils:Coil	PANTHER:PTHR31851	PANTHER:PTHR31851:SF19	PFAM:PF01988
SEG:seg	TIGR:cd02435	TMHMM:TMhelix	MapMan:24.2.12.1	MapMan:25.4.5.3	:

Description

No Description!

Coordinates

chr2B:-:492146349..492148298

Molecular Weight (calculated)

26208.8 Da

IEP (calculated)

5.102

GRAVY (calculated)

0.158

Length

246 amino acids

Sequence
(BLAST)

001: MDGHGDGRQP MLEKGPPSHR ERHFTAGEVV RDVIMGVSDG LTVPFALAAG LSGASAPSSL VLTAGLAEVA AGAISMGLGG YLAAQSEADH YKREMKREQE
101: EIIAVPDTEA AEIGDIMAEY GLEPHEYGPV VEGLRRNPQA WLEFMMRFEL GLEKPDPRRA LQSALTIALS YIIGGLVPLL PYMFISTVQD AMLTSVGVTL
201: LALLFFGYIK GRFTGNRPFL SAVQTTIIGA VASAAAYGMA KAVQAR

Best Arabidopsis Sequence Match ( AT2G01770.1 )
(BLAST)

001: MSSEEDKITR ISIEPEKQTL LDHHTEKHFT AGEIVRDIII GVSDGLTVPF ALAAGLSGAN ASSSIVLTAG IAEVAAGAIS MGLGGYLAAK SEEDHYAREM
101: KREQEEIVAV PETEAAEVAE ILAQYGIEPH EYSPVVNALR KNPQAWLDFM MRFELGLEKP DPKRALQSAF TIAIAYVLGG FIPLLPYMLI PHAMDAVVAS
201: VVITLFALFI FGYAKGHFTG SKPLRSAFET AFIGAIASAA AFCLAKVVQH

Arabidopsis Description

VIT1Vacuolar iron transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUA5]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.