Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- plastid 1
- mitochondrion 1
- plasma membrane 2
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_10s0003g01830.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G01770.1 | VIT_10s0003g01830.t01 | AT4G19030.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g008060.2.1 | Tomato | plasma membrane | 79.18 | 81.17 |
| PGSC0003DMT400075781 | Potato | plasma membrane | 79.18 | 81.17 |
| VIT_01s0011g06010.t01 | Wine grape | cytosol | 78.78 | 78.78 |
| KRH41739 | Soybean | cytosol | 76.73 | 77.69 |
| KRH60441 | Soybean | cytosol | 77.14 | 76.52 |
| Os09t0396900-02 | Rice | plasma membrane | 75.92 | 75.61 |
| AT2G01770.1 | Thale cress | cytosol, peroxisome, plasma membrane | 75.92 | 74.4 |
| TraesCS5A01G203400.1 | Wheat | cytosol | 74.29 | 74.29 |
| EES12303 | Sorghum | mitochondrion, nucleus, peroxisome | 74.29 | 73.98 |
| TraesCS5B01G202100.1 | Wheat | cytosol | 73.88 | 73.88 |
| HORVU4Hr1G031840.1 | Barley | cytosol | 73.88 | 73.88 |
| HORVU5Hr1G060370.2 | Barley | cytosol | 73.88 | 73.88 |
| TraesCS7D01G413000.1 | Wheat | cytosol, peroxisome, plasma membrane | 73.47 | 73.47 |
| Zm00001d025623_P001 | Maize | cytosol, peroxisome, plasma membrane | 73.47 | 73.17 |
| TraesCS7A01G420900.1 | Wheat | cytosol, peroxisome, plasma membrane | 64.49 | 72.48 |
| GSMUA_Achr7P12420_001 | Banana | cytosol | 74.69 | 72.33 |
| Os04t0463400-01 | Rice | cytosol | 74.29 | 72.22 |
| CDY64568 | Canola | cytosol, peroxisome, plasma membrane | 73.47 | 72.0 |
| Bra026634.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 73.47 | 72.0 |
| CDY17642 | Canola | cytosol | 49.8 | 71.76 |
| Bra024856.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 72.65 | 71.2 |
| TraesCS2B01G345300.1 | Wheat | cytosol, peroxisome, plasma membrane | 71.02 | 70.73 |
| TraesCS5D01G209900.2 | Wheat | cytosol | 73.88 | 70.7 |
| TraesCS2A01G336600.1 | Wheat | cytosol, peroxisome, plasma membrane | 70.61 | 70.33 |
| CDY09418 | Canola | plasma membrane | 49.39 | 69.94 |
| TraesCS2D01G326300.1 | Wheat | cytosol | 70.61 | 69.76 |
| EER96705 | Sorghum | cytosol | 71.43 | 69.72 |
| Zm00001d020395_P002 | Maize | plasma membrane | 71.43 | 69.72 |
| GSMUA_Achr9P27290_001 | Banana | cytosol | 72.65 | 69.53 |
| HORVU7Hr1G097360.1 | Barley | cytosol, endoplasmic reticulum, peroxisome | 42.04 | 66.45 |
| HORVU2Hr1G080870.6 | Barley | mitochondrion, plastid | 70.61 | 55.27 |
| Zm00001d005715_P004 | Maize | plasma membrane | 71.02 | 45.31 |
| VIT_15s0048g01070.t01 | Wine grape | nucleus, peroxisome, plasma membrane | 24.08 | 22.35 |
Protein Annotations
| EntrezGene:100247446 | wikigene:100247446 | MapMan:24.2.12.1 | MapMan:25.4.5.3 | EMBL:AM462816 | ProteinID:CAN83350 |
| ProteinID:CAN83350.1 | ProteinID:CCB50770 | ProteinID:CCB50770.1 | InterPro:Ccc1_fam | ncoils:Coil | UniProt:F6HFC1 |
| EMBL:FN595752 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005381 | GO:GO:0005384 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0006810 |
| GO:GO:0006880 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 |
| GO:GO:0030026 | GO:GO:0034755 | GO:GO:0071281 | GO:GO:0071421 | EntrezGene:LOC100247446 | wikigene:LOC100247446 |
| PFAM:PF01988 | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF9 | TIGR:TC62722 | TMHMM:TMhelix | UniParc:UPI0001982964 |
| ArrayExpress:VIT_01s0011g06000 | EnsemblPlantsGene:VIT_01s0011g06000 | EnsemblPlants:VIT_01s0011g06000.t01 | unigene:Vvi.9621 | RefSeq:XP_002284982 | RefSeq:XP_002284982.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr1:-:5758864..5761288
Molecular Weight (calculated)
26122.0 Da
IEP (calculated)
5.371
GRAVY (calculated)
0.284
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MESMDGSGKQ KLLLDDHKER HFTAGEIVRD IIIGVSDGLT VPFALAAGLS GANASSSIIL TAGIAEVAAG AISMGLGGYL AAKSEADHYM RELKREQEEI
101: ITVPDIEAAE IEEILSQYGL EPHESAPVVN ALRRRPQAWL DFMMKFELGL EKPDPRRAMQ SAFTIALAYV LGGFVPLIPY MLVPRAEEAV IASVVLTLVA
201: LLIFGYGKGR FTGNKPLRSA LQTALIGALA SAAAFGMAKA VRAIP
101: ITVPDIEAAE IEEILSQYGL EPHESAPVVN ALRRRPQAWL DFMMKFELGL EKPDPRRAMQ SAFTIALAYV LGGFVPLIPY MLVPRAEEAV IASVVLTLVA
201: LLIFGYGKGR FTGNKPLRSA LQTALIGALA SAAAFGMAKA VRAIP
001: MSSEEDKITR ISIEPEKQTL LDHHTEKHFT AGEIVRDIII GVSDGLTVPF ALAAGLSGAN ASSSIVLTAG IAEVAAGAIS MGLGGYLAAK SEEDHYAREM
101: KREQEEIVAV PETEAAEVAE ILAQYGIEPH EYSPVVNALR KNPQAWLDFM MRFELGLEKP DPKRALQSAF TIAIAYVLGG FIPLLPYMLI PHAMDAVVAS
201: VVITLFALFI FGYAKGHFTG SKPLRSAFET AFIGAIASAA AFCLAKVVQH
101: KREQEEIVAV PETEAAEVAE ILAQYGIEPH EYSPVVNALR KNPQAWLDFM MRFELGLEKP DPKRALQSAF TIAIAYVLGG FIPLLPYMLI PHAMDAVVAS
201: VVITLFALFI FGYAKGHFTG SKPLRSAFET AFIGAIASAA AFCLAKVVQH
Arabidopsis Description
VIT1Vacuolar iron transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUA5]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.