Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G420900.1 | Wheat | cytosol, peroxisome, plasma membrane | 83.27 | 93.58 |
| HORVU7Hr1G097360.1 | Barley | cytosol, endoplasmic reticulum, peroxisome | 53.06 | 83.87 |
| TraesCS2D01G326300.1 | Wheat | cytosol | 81.22 | 80.24 |
| VIT_01s0011g06000.t01 | Wine grape | plasma membrane | 73.47 | 73.47 |
| GSMUA_Achr9P27290_001 | Banana | cytosol | 74.69 | 71.48 |
| PGSC0003DMT400075781 | Potato | plasma membrane | 68.98 | 70.71 |
| Solyc04g008060.2.1 | Tomato | plasma membrane | 68.98 | 70.71 |
| Bra026634.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 71.43 | 70.0 |
| CDY64568 | Canola | cytosol, peroxisome, plasma membrane | 71.43 | 70.0 |
| CDY09418 | Canola | plasma membrane | 49.39 | 69.94 |
| TraesCS5D01G209900.2 | Wheat | cytosol | 73.06 | 69.92 |
| VIT_01s0011g06010.t01 | Wine grape | cytosol | 69.8 | 69.8 |
| AT2G01770.1 | Thale cress | cytosol, peroxisome, plasma membrane | 71.02 | 69.6 |
| CDY17642 | Canola | cytosol | 48.16 | 69.41 |
| KRH41739 | Soybean | cytosol | 68.16 | 69.01 |
| KRH60441 | Soybean | cytosol | 67.35 | 66.8 |
| Bra024856.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 68.16 | 66.8 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G413000.1 | EnsemblPlantsGene:TraesCS7D01G413000 | InterPro:Ccc1_fam | ncoils:Coil | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF19 |
| PFAM:PF01988 | SEG:seg | TIGR:cd02435 | TMHMM:TMhelix | MapMan:24.2.12.1 | MapMan:25.4.5.3 |
Description
No Description!
Coordinates
chr7D:+:531553789..531557112
Molecular Weight (calculated)
26198.9 Da
IEP (calculated)
4.832
GRAVY (calculated)
0.284
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSVGEGREQ PMLEEISSHK EHHFTAGEVV RDVIMGVSDG LTVPFALAAG LSGASAPSSL VLTAGLAEVA AGAISMGLGG YLAAKSEADH YERELRREQE
101: EIIAVPEIEA AEIGEIMSQY GLEPHEYGPV VMGLRRKPQA WLEFMMRFEL GLEKPDPRRA LQSALTIALS YVVGGLVPLM PYMLLPTAHD AMLTSVVVTL
201: AALFFFGYVK GRFTGSRPLF SALQTTFIGA VASAAAYGIA KVVQV
101: EIIAVPEIEA AEIGEIMSQY GLEPHEYGPV VMGLRRKPQA WLEFMMRFEL GLEKPDPRRA LQSALTIALS YVVGGLVPLM PYMLLPTAHD AMLTSVVVTL
201: AALFFFGYVK GRFTGSRPLF SALQTTFIGA VASAAAYGIA KVVQV
001: MSSEEDKITR ISIEPEKQTL LDHHTEKHFT AGEIVRDIII GVSDGLTVPF ALAAGLSGAN ASSSIVLTAG IAEVAAGAIS MGLGGYLAAK SEEDHYAREM
101: KREQEEIVAV PETEAAEVAE ILAQYGIEPH EYSPVVNALR KNPQAWLDFM MRFELGLEKP DPKRALQSAF TIAIAYVLGG FIPLLPYMLI PHAMDAVVAS
201: VVITLFALFI FGYAKGHFTG SKPLRSAFET AFIGAIASAA AFCLAKVVQH
101: KREQEEIVAV PETEAAEVAE ILAQYGIEPH EYSPVVNALR KNPQAWLDFM MRFELGLEKP DPKRALQSAF TIAIAYVLGG FIPLLPYMLI PHAMDAVVAS
201: VVITLFALFI FGYAKGHFTG SKPLRSAFET AFIGAIASAA AFCLAKVVQH
Arabidopsis Description
VIT1Vacuolar iron transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUA5]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.