Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026634.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 91.6 | 91.6 |
| CDY64568 | Canola | cytosol, peroxisome, plasma membrane | 91.6 | 91.6 |
| CDY09418 | Canola | plasma membrane | 60.8 | 87.86 |
| Bra024856.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 87.2 | 87.2 |
| CDY17642 | Canola | cytosol | 58.4 | 85.88 |
| KRH41739 | Soybean | cytosol | 79.6 | 82.23 |
| PGSC0003DMT400075781 | Potato | plasma membrane | 78.4 | 82.01 |
| KRH60441 | Soybean | cytosol | 80.8 | 81.78 |
| Solyc04g008060.2.1 | Tomato | plasma membrane | 78.0 | 81.59 |
| VIT_01s0011g06000.t01 | Wine grape | plasma membrane | 74.4 | 75.92 |
| TraesCS7D01G413000.1 | Wheat | cytosol, peroxisome, plasma membrane | 69.6 | 71.02 |
| GSMUA_Achr7P12420_001 | Banana | cytosol | 71.6 | 70.75 |
| VIT_01s0011g06010.t01 | Wine grape | cytosol | 69.2 | 70.61 |
| Os09t0396900-02 | Rice | plasma membrane | 69.2 | 70.33 |
| TraesCS7A01G420900.1 | Wheat | cytosol, peroxisome, plasma membrane | 60.8 | 69.72 |
| EES12303 | Sorghum | mitochondrion, nucleus, peroxisome | 67.6 | 68.7 |
| Os04t0463400-01 | Rice | cytosol | 68.8 | 68.25 |
| Zm00001d025623_P001 | Maize | cytosol, peroxisome, plasma membrane | 66.4 | 67.48 |
| TraesCS2B01G345300.1 | Wheat | cytosol, peroxisome, plasma membrane | 66.4 | 67.48 |
| TraesCS2A01G336600.1 | Wheat | cytosol, peroxisome, plasma membrane | 66.4 | 67.48 |
| TraesCS5B01G202100.1 | Wheat | cytosol | 66.0 | 67.35 |
| HORVU4Hr1G031840.1 | Barley | cytosol | 66.0 | 67.35 |
| HORVU5Hr1G060370.2 | Barley | cytosol | 66.0 | 67.35 |
| TraesCS5A01G203400.1 | Wheat | cytosol | 65.6 | 66.94 |
| Zm00001d020395_P002 | Maize | plasma membrane | 66.8 | 66.53 |
| TraesCS2D01G326300.1 | Wheat | cytosol | 66.0 | 66.53 |
| EER96705 | Sorghum | cytosol | 66.4 | 66.14 |
| GSMUA_Achr9P27290_001 | Banana | cytosol | 66.8 | 65.23 |
| TraesCS5D01G209900.2 | Wheat | cytosol | 65.6 | 64.06 |
| HORVU7Hr1G097360.1 | Barley | cytosol, endoplasmic reticulum, peroxisome | 39.2 | 63.23 |
| HORVU2Hr1G080870.6 | Barley | mitochondrion, plastid | 66.0 | 52.72 |
| Zm00001d005715_P004 | Maize | plasma membrane | 65.2 | 42.45 |
Protein Annotations
| MapMan:24.2.12.1 | MapMan:25.4.5.3 | EntrezGene:814708 | UniProt:A0A178VRP6 | ProteinID:AAD12695.1 | ProteinID:AEC05496.1 |
| ArrayExpress:AT2G01770 | EnsemblPlantsGene:AT2G01770 | RefSeq:AT2G01770 | TAIR:AT2G01770 | RefSeq:AT2G01770-TAIR-G | EnsemblPlants:AT2G01770.1 |
| TAIR:AT2G01770.1 | EMBL:AY316134 | EMBL:BT028987 | InterPro:Ccc1_fam | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005384 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 |
| GO:GO:0005774 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006880 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 | GO:GO:0030026 | GO:GO:0055072 | GO:GO:0071281 |
| GO:GO:0071421 | RefSeq:NP_178286.1 | ProteinID:OAP07733.1 | PFAM:PF01988 | PO:PO:0000034 | PO:PO:0004506 |
| PO:PO:0007616 | PO:PO:0009046 | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF9 | UniProt:Q9ZUA5 | TMHMM:TMhelix |
| UniParc:UPI00000A58D7 | Symbol:VIT1 | SEG:seg | : | : | : |
Description
VIT1Vacuolar iron transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUA5]
Coordinates
chr2:-:334663..336462
Molecular Weight (calculated)
26861.5 Da
IEP (calculated)
4.977
GRAVY (calculated)
0.289
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSEEDKITR ISIEPEKQTL LDHHTEKHFT AGEIVRDIII GVSDGLTVPF ALAAGLSGAN ASSSIVLTAG IAEVAAGAIS MGLGGYLAAK SEEDHYAREM
101: KREQEEIVAV PETEAAEVAE ILAQYGIEPH EYSPVVNALR KNPQAWLDFM MRFELGLEKP DPKRALQSAF TIAIAYVLGG FIPLLPYMLI PHAMDAVVAS
201: VVITLFALFI FGYAKGHFTG SKPLRSAFET AFIGAIASAA AFCLAKVVQH
101: KREQEEIVAV PETEAAEVAE ILAQYGIEPH EYSPVVNALR KNPQAWLDFM MRFELGLEKP DPKRALQSAF TIAIAYVLGG FIPLLPYMLI PHAMDAVVAS
201: VVITLFALFI FGYAKGHFTG SKPLRSAFET AFIGAIASAA AFCLAKVVQH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.