Factsheet for Zm00001d020395_P002

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96705	Sorghum	cytosol	95.22	95.22
Os09t0396900-02	Rice	plasma membrane	85.26	86.99
HORVU4Hr1G031840.1	Barley	cytosol	80.48	82.45
TraesCS5B01G202100.1	Wheat	cytosol	80.48	82.45
TraesCS5A01G203400.1	Wheat	cytosol	80.48	82.45
HORVU5Hr1G060370.2	Barley	cytosol	80.48	82.45
TraesCS5D01G209900.2	Wheat	cytosol	80.48	78.91
Zm00001d025623_P001	Maize	cytosol, peroxisome, plasma membrane	72.11	73.58
VIT_01s0011g06000.t01	Wine grape	plasma membrane	69.72	71.43
PGSC0003DMT400075781	Potato	plasma membrane	67.73	71.13
Solyc04g008060.2.1	Tomato	plasma membrane	67.73	71.13
VIT_01s0011g06010.t01	Wine grape	cytosol	69.32	71.02
GSMUA_Achr7P12420_001	Banana	cytosol	71.31	70.75
CDY64568	Canola	cytosol, peroxisome, plasma membrane	69.32	69.6
Bra026634.1-P	Field mustard	cytosol, peroxisome, plasma membrane	69.32	69.6
KRH41739	Soybean	cytosol	66.93	69.42
KRH60441	Soybean	cytosol	66.14	67.21
AT2G01770.1	Thale cress	cytosol, peroxisome, plasma membrane	66.53	66.8
Bra024856.1-P	Field mustard	cytosol, peroxisome, plasma membrane	65.74	66.0
CDY09418	Canola	plasma membrane	43.82	63.58
CDY17642	Canola	cytosol	42.63	62.94
Zm00001d005715_P004	Maize	plasma membrane	93.63	61.2

Protein Annotations

EMBL:EU955562	EnsemblPlants:Zm00001d020395_P002	EnsemblPlants:Zm00001d020395_T002	EnsemblPlantsGene:Zm00001d020395	EntrezGene:103632716	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:Ccc1_fam	ncoils:Coil	PANTHER:PTHR31851	PANTHER:PTHR31851:SF19
PFAM:PF01988	ProteinID:ONM54850.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI000182BD8B	UniProt:B6SS47
MapMan:24.2.12.1	MapMan:25.4.5.3	:	:	:	:

Description

Protein CCC1

Coordinates

chr7:+:111178019..111180159

Molecular Weight (calculated)

26459.9 Da

IEP (calculated)

4.610

GRAVY (calculated)

0.314

Length

251 amino acids

Sequence
(BLAST)

001: MALNGGKTTL VQDEEKQQLL LEKHTEKHFT AGEVVRDIII GVSDGLTVPF ALAAGLSGAN ASSALVLTAG LAEVAAGAIS MGLGGYLAAK SEADHYNREL
101: QREQDEIDTV PDVEAAEIAD ILSQYGLGPE EYGPVVTSLR NNPKAWLEFM MKFELGLERP EPRRALVSAA TIALSYVAGG LVPLLPYMFV PEAARAMAVS
201: VAVTLAALLF FGFVKGRFTG DRPFFSAVQT TVVGALASAA AFAMARAVQS I

Best Arabidopsis Sequence Match ( AT2G01770.1 )
(BLAST)

001: MSSEEDKITR ISIEPEKQTL LDHHTEKHFT AGEIVRDIII GVSDGLTVPF ALAAGLSGAN ASSSIVLTAG IAEVAAGAIS MGLGGYLAAK SEEDHYAREM
101: KREQEEIVAV PETEAAEVAE ILAQYGIEPH EYSPVVNALR KNPQAWLDFM MRFELGLEKP DPKRALQSAF TIAIAYVLGG FIPLLPYMLI PHAMDAVVAS
201: VVITLFALFI FGYAKGHFTG SKPLRSAFET AFIGAIASAA AFCLAKVVQH

Arabidopsis Description

VIT1Vacuolar iron transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUA5]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.