Factsheet for TraesCS5A01G203400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G031840.1	Barley	cytosol	98.78	98.78
HORVU5Hr1G060370.2	Barley	cytosol	98.78	98.78
TraesCS5B01G202100.1	Wheat	cytosol	98.78	98.78
TraesCS5D01G209900.2	Wheat	cytosol	98.78	94.53
Os09t0396900-02	Rice	plasma membrane	86.94	86.59
Zm00001d020395_P002	Maize	plasma membrane	82.45	80.48
EER96705	Sorghum	cytosol	82.45	80.48
TraesCS2A01G336600.1	Wheat	cytosol, peroxisome, plasma membrane	75.1	74.8
VIT_01s0011g06000.t01	Wine grape	plasma membrane	74.29	74.29
PGSC0003DMT400075781	Potato	plasma membrane	71.43	73.22
Solyc04g008060.2.1	Tomato	plasma membrane	71.43	73.22
TraesCS7A01G420900.1	Wheat	cytosol, peroxisome, plasma membrane	63.67	71.56
GSMUA_Achr7P12420_001	Banana	cytosol	73.88	71.54
VIT_01s0011g06010.t01	Wine grape	cytosol	70.61	70.61
KRH41739	Soybean	cytosol	68.57	69.42
KRH60441	Soybean	cytosol	68.98	68.42
CDY64568	Canola	cytosol, peroxisome, plasma membrane	68.57	67.2
Bra026634.1-P	Field mustard	cytosol, peroxisome, plasma membrane	68.57	67.2
AT2G01770.1	Thale cress	cytosol, peroxisome, plasma membrane	66.94	65.6
Bra024856.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.12	64.8
CDY17642	Canola	cytosol	44.08	63.53
CDY09418	Canola	plasma membrane	43.67	61.85
Zm00001d005715_P004	Maize	plasma membrane	83.27	53.12

Protein Annotations

EnsemblPlants:TraesCS5A01G203400.1	EnsemblPlantsGene:TraesCS5A01G203400	GO:GO:0003674	GO:GO:0005215	GO:GO:0005381	GO:GO:0006810
GO:GO:0008150	InterPro:Ccc1_fam	PANTHER:PTHR31851	PANTHER:PTHR31851:SF19	PFAM:PF01988	SEG:seg
TIGR:cd02435	TMHMM:TMhelix	MapMan:24.2.12.1	MapMan:25.4.5.3	:	:

Description

No Description!

Coordinates

chr5A:+:412913439..412915571

Molecular Weight (calculated)

25994.3 Da

IEP (calculated)

4.519

GRAVY (calculated)

0.228

Length

245 amino acids

Sequence
(BLAST)

001: MVKHVQDEEN QRLLLDDHKE KHFTSGEVVR DIIIGVSDGL TVPFALAAGL SGANASSSLV LTAGLAEVAA GAISMGLGGY LAAKSDADHY YRELQREQDE
101: IDTVPDTEAA EIGDILSEYG LGPEEYGPVV TSLRNNPKAW LEFMMKFELG LEKPDPRRAL TSAATIALAY VVGGMVPLSP YMFVASVDSA MMTSVVVTLA
201: ALLFFGYVKG RFTGNRPFLS AIQTAIIGAL ASSAAYGMAK AVQAI

Best Arabidopsis Sequence Match ( AT2G01770.1 )
(BLAST)

001: MSSEEDKITR ISIEPEKQTL LDHHTEKHFT AGEIVRDIII GVSDGLTVPF ALAAGLSGAN ASSSIVLTAG IAEVAAGAIS MGLGGYLAAK SEEDHYAREM
101: KREQEEIVAV PETEAAEVAE ILAQYGIEPH EYSPVVNALR KNPQAWLDFM MRFELGLEKP DPKRALQSAF TIAIAYVLGG FIPLLPYMLI PHAMDAVVAS
201: VVITLFALFI FGYAKGHFTG SKPLRSAFET AFIGAIASAA AFCLAKVVQH

Arabidopsis Description

VIT1Vacuolar iron transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUA5]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.