Factsheet for TraesCS5D01G209900.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G202100.1	Wheat	cytosol	94.92	99.18
HORVU4Hr1G031840.1	Barley	cytosol	94.92	99.18
HORVU5Hr1G060370.2	Barley	cytosol	94.92	99.18
TraesCS5A01G203400.1	Wheat	cytosol	94.53	98.78
Os09t0396900-02	Rice	plasma membrane	83.2	86.59
Zm00001d020395_P002	Maize	plasma membrane	78.91	80.48
EER96705	Sorghum	cytosol	78.91	80.48
TraesCS2D01G326300.1	Wheat	cytosol	72.66	75.0
VIT_01s0011g06000.t01	Wine grape	plasma membrane	70.7	73.88
PGSC0003DMT400075781	Potato	plasma membrane	68.36	73.22
Solyc04g008060.2.1	Tomato	plasma membrane	68.36	73.22
TraesCS7D01G413000.1	Wheat	cytosol, peroxisome, plasma membrane	69.92	73.06
GSMUA_Achr7P12420_001	Banana	cytosol	69.92	70.75
VIT_01s0011g06010.t01	Wine grape	cytosol	67.19	70.2
KRH41739	Soybean	cytosol	65.62	69.42
KRH60441	Soybean	cytosol	66.02	68.42
CDY64568	Canola	cytosol, peroxisome, plasma membrane	65.62	67.2
Bra026634.1-P	Field mustard	cytosol, peroxisome, plasma membrane	65.62	67.2
AT2G01770.1	Thale cress	cytosol, peroxisome, plasma membrane	64.06	65.6
Bra024856.1-P	Field mustard	cytosol, peroxisome, plasma membrane	63.28	64.8
CDY17642	Canola	cytosol	42.58	64.12
CDY09418	Canola	plasma membrane	42.19	62.43
Zm00001d005715_P004	Maize	plasma membrane	80.47	53.65

Protein Annotations

EnsemblPlants:TraesCS5D01G209900.2	EnsemblPlantsGene:TraesCS5D01G209900	GO:GO:0003674	GO:GO:0005215	GO:GO:0005381	GO:GO:0006810
GO:GO:0008150	InterPro:Ccc1_fam	PANTHER:PTHR31851	PANTHER:PTHR31851:SF19	PFAM:PF01988	SEG:seg
TIGR:cd02435	TMHMM:TMhelix	MapMan:24.2.12.1	MapMan:25.4.5.3	:	:

Description

No Description!

Coordinates

chr5D:+:318059842..318062039

Molecular Weight (calculated)

27366.1 Da

IEP (calculated)

4.620

GRAVY (calculated)

0.250

Length

256 amino acids

Sequence
(BLAST)

001: MVKPVQDEEN QRLLLDDHKE KHFTSGEVVR DIIIGVSDGL TVPFALAAGL SGADASSSLV LTAGLAEVAA GAISMGLGGL RLMWARTLVR YLAAKSDADH
101: YYRELQREQD EIDTVPDTEA AEIADILSEY GLGPEEYGPV VTSLRNNPKA WLEFMMKFEL GLEKPDPRRA LTSAATIALA YVVGGMVPLS PYMFVASVDS
201: AMMTSVVVTL AALLFFGYVK GRFTGNRPFL SAIQTAIIGA LASSAAYGMA KAVQAI

Best Arabidopsis Sequence Match ( AT2G01770.1 )
(BLAST)

001: MSSEEDKITR ISIEPEKQTL LDHHTEKHFT AGEIVRDIII GVSDGLTVPF ALAAGLSGAN ASSSIVLTAG IAEVAAGAIS MGLGGYLAAK SEEDHYAREM
101: KREQEEIVAV PETEAAEVAE ILAQYGIEPH EYSPVVNALR KNPQAWLDFM MRFELGLEKP DPKRALQSAF TIAIAYVLGG FIPLLPYMLI PHAMDAVVAS
201: VVITLFALFI FGYAKGHFTG SKPLRSAFET AFIGAIASAA AFCLAKVVQH

Arabidopsis Description

VIT1Vacuolar iron transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUA5]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.