Factsheet for Zm00001d005715_P004

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96705	Sorghum	cytosol	63.54	97.21
Zm00001d020395_P002	Maize	plasma membrane	61.2	93.63
Os09t0396900-02	Rice	plasma membrane	55.99	87.4
TraesCS5B01G202100.1	Wheat	cytosol	53.12	83.27
TraesCS5A01G203400.1	Wheat	cytosol	53.12	83.27
HORVU5Hr1G060370.2	Barley	cytosol	53.12	83.27
HORVU4Hr1G031840.1	Barley	cytosol	53.12	83.27
TraesCS5D01G209900.2	Wheat	cytosol	53.65	80.47
Zm00001d025623_P001	Maize	cytosol, peroxisome, plasma membrane	47.4	73.98
GSMUA_Achr7P12420_001	Banana	cytosol	46.88	71.15
PGSC0003DMT400075781	Potato	plasma membrane	44.27	71.13
Solyc04g008060.2.1	Tomato	plasma membrane	44.27	71.13
VIT_01s0011g06000.t01	Wine grape	plasma membrane	45.31	71.02
VIT_01s0011g06010.t01	Wine grape	cytosol	45.05	70.61
KRH41739	Soybean	cytosol	43.23	68.59
CDY64568	Canola	cytosol, peroxisome, plasma membrane	44.27	68.0
Bra026634.1-P	Field mustard	cytosol, peroxisome, plasma membrane	44.27	68.0
KRH60441	Soybean	cytosol	42.71	66.4
AT2G01770.1	Thale cress	cytosol, peroxisome, plasma membrane	42.45	65.2
Bra024856.1-P	Field mustard	cytosol, peroxisome, plasma membrane	42.45	65.2
CDY09418	Canola	plasma membrane	28.39	63.01
CDY17642	Canola	cytosol	27.86	62.94

Protein Annotations

EnsemblPlants:Zm00001d005715_P004	EnsemblPlants:Zm00001d005715_T004	EnsemblPlantsGene:Zm00001d005715	EntrezGene:103647403	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:Ccc1_fam	ncoils:Coil	PANTHER:PTHR31851	PANTHER:PTHR31851:SF19	PFAM:PF01988
ProteinID:ONM21713.1	ProteinID:ONM21714.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0008454F33	UniProt:A0A1D6EPL5
MapMan:24.2.12.1	MapMan:25.4.5.3	:	:	:	:

Description

Vacuolar iron transporter 1

Coordinates

chr2:+:184452989..184461356

Molecular Weight (calculated)

41442.9 Da

IEP (calculated)

5.450

GRAVY (calculated)

0.041

Length

384 amino acids

Sequence
(BLAST)

001: MALNGGKTFV HDEEKQRLLL EEHTEKHFTA GEVVRDIIIG VSDGLTVPFA LAAGLSGANA SSALVLTAGL AEVAAGAISM GLGGDSTTTK QADYVPDTLH
101: TEQMTEQAGL NCSGHSDILL HLNALNKQVR HFTGLGNTPM TYNLRPVIEE IQRSAEDSGD KRNLKMCLGM LKSMRNRCDQ NFVAYRKGLG VVCNKKGGFG
201: VDDFVVEFFG ELLCVRVRYL AAKSEADHYN RELQREQDEI DTVPDVEAAE IADILSEYGL GPQEYGPVVT SLRNNPKAWL EFMMKFELGL EKPEPRRALV
301: SAATIALSYV AGGLVPLLPY MFVPEAGRAM AVSVAVTLAA LLFFGFVKGR FTGDRPFFSA VQTTVVGALA SAAAYAMARA VQSI

Best Arabidopsis Sequence Match ( AT2G01770.1 )
(BLAST)

001: MSSEEDKITR ISIEPEKQTL LDHHTEKHFT AGEIVRDIII GVSDGLTVPF ALAAGLSGAN ASSSIVLTAG IAEVAAGAIS MGLGGYLAAK SEEDHYAREM
101: KREQEEIVAV PETEAAEVAE ILAQYGIEPH EYSPVVNALR KNPQAWLDFM MRFELGLEKP DPKRALQSAF TIAIAYVLGG FIPLLPYMLI PHAMDAVVAS
201: VVITLFALFI FGYAKGHFTG SKPLRSAFET AFIGAIASAA AFCLAKVVQH

Arabidopsis Description

VIT1Vacuolar iron transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUA5]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.