Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g091850.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 67.8 | 67.55 |
| PGSC0003DMT400000004 | Potato | plasma membrane | 68.18 | 67.42 |
| KRH00672 | Soybean | plasma membrane | 61.36 | 60.9 |
| VIT_01s0011g06000.t01 | Wine grape | plasma membrane | 22.35 | 24.08 |
| VIT_01s0011g06010.t01 | Wine grape | cytosol | 21.59 | 23.27 |
Protein Annotations
| EntrezGene:100247141 | wikigene:100247141 | MapMan:24.2.12.1 | MapMan:25.4.5.3 | ProteinID:CBI38841 | ProteinID:CBI38841.3 |
| InterPro:Ccc1_fam | UniProt:D7U7R2 | EMBL:FN596739 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005381 |
| GO:GO:0005384 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006810 | GO:GO:0006880 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 | GO:GO:0030026 | GO:GO:0034755 |
| GO:GO:0071281 | GO:GO:0071421 | EntrezGene:LOC100247141 | wikigene:LOC100247141 | PFAM:PF01988 | PANTHER:PTHR31851 |
| PANTHER:PTHR31851:SF4 | TIGR:TC66310 | TMHMM:TMhelix | UniParc:UPI00015CB0F9 | ArrayExpress:VIT_15s0048g01070 | EnsemblPlantsGene:VIT_15s0048g01070 |
| EnsemblPlants:VIT_15s0048g01070.t01 | unigene:Vvi.6199 | RefSeq:XP_002273056 | RefSeq:XP_002273056.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr15:+:15196650..15201181
Molecular Weight (calculated)
28098.8 Da
IEP (calculated)
5.691
GRAVY (calculated)
0.246
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEAAGGDTT RLLRSEGGEA ENQKISKRPK EPWRGEYVKS IVYAGLDAIV TCFSLISSMS AGHLSSVDVL VLGFANLVAD GISMGFGDFV SSGTEKDAAV
101: MERVVTEWEV ANQGGPQKTQ LIRHYQALGM DLHDATTVVN IFSKYRDILV DEKMTAQKGM LPPDEAEKPW KSGLVTFASF LVFGSAPLLS FIVLTPFTHS
201: DTVKFVGASV LSALALVLLG IAKARIAGQN YAVSAVVTFF NGAIAAAAAY SIGWTLRNVA GLQD
101: MERVVTEWEV ANQGGPQKTQ LIRHYQALGM DLHDATTVVN IFSKYRDILV DEKMTAQKGM LPPDEAEKPW KSGLVTFASF LVFGSAPLLS FIVLTPFTHS
201: DTVKFVGASV LSALALVLLG IAKARIAGQN YAVSAVVTFF NGAIAAAAAY SIGWTLRNVA GLQD
001: MSSEEDKITR ISIEPEKQTL LDHHTEKHFT AGEIVRDIII GVSDGLTVPF ALAAGLSGAN ASSSIVLTAG IAEVAAGAIS MGLGGYLAAK SEEDHYAREM
101: KREQEEIVAV PETEAAEVAE ILAQYGIEPH EYSPVVNALR KNPQAWLDFM MRFELGLEKP DPKRALQSAF TIAIAYVLGG FIPLLPYMLI PHAMDAVVAS
201: VVITLFALFI FGYAKGHFTG SKPLRSAFET AFIGAIASAA AFCLAKVVQH
101: KREQEEIVAV PETEAAEVAE ILAQYGIEPH EYSPVVNALR KNPQAWLDFM MRFELGLEKP DPKRALQSAF TIAIAYVLGG FIPLLPYMLI PHAMDAVVAS
201: VVITLFALFI FGYAKGHFTG SKPLRSAFET AFIGAIASAA AFCLAKVVQH
Arabidopsis Description
VIT1Vacuolar iron transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUA5]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.