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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400000004 Potato plasma membrane 96.6 95.88
VIT_15s0048g01070.t01 Wine grape nucleus, peroxisome, plasma membrane 67.55 67.8
KRH00672 Soybean plasma membrane 56.23 56.02
Solyc04g008060.2.1 Tomato plasma membrane 23.4 25.94
Protein Annotations
MapMan:24.2.12.1MapMan:25.4.5.3InterPro:Ccc1_famGO:GO:0003674GO:GO:0005215GO:GO:0005381
GO:GO:0005384GO:GO:0005575GO:GO:0005623GO:GO:0006810GO:GO:0006880GO:GO:0008150
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0019725GO:GO:0030026GO:GO:0034755
GO:GO:0071281GO:GO:0071421UniProt:K4AZC5PFAM:PF01988PANTHER:PTHR31851PANTHER:PTHR31851:SF4
EnsemblPlantsGene:Solyc01g091850.2EnsemblPlants:Solyc01g091850.2.1TMHMM:TMhelixUniParc:UPI00027683D8SEG:seg:
Description
No Description!
Coordinates
chr1:+:85396050..85397291
Molecular Weight (calculated)
28555.4 Da
IEP (calculated)
6.280
GRAVY (calculated)
0.168
Length
265 amino acids
Sequence
(BLAST)
001: MAETNSNGGF RAPLLRSLDG ELEKGKNGRP KEPWKGEVVK SIVYAGLDAI VTSFSLISSI SAGHLSSVDV LVLGFANLVA DGISMGFGDY VSSSTEKDVA
101: AKERTVTEWD IINQHRSQKE ELLRHYQQLG MNDTDANTVV NIFAKYRDIM IDEKMAVQKG LLPPDQADKP WKSGLITFTA FIVFGCAPLL AFIVLIPFTR
201: NDTYKFIGAC VFSAVALALL GIAKAKIAGQ NYALSASITL FNGLIAGAAA YGIGWTLRNV AGLEE
Best Arabidopsis Sequence Match ( AT2G01770.1 )
(BLAST)
001: MSSEEDKITR ISIEPEKQTL LDHHTEKHFT AGEIVRDIII GVSDGLTVPF ALAAGLSGAN ASSSIVLTAG IAEVAAGAIS MGLGGYLAAK SEEDHYAREM
101: KREQEEIVAV PETEAAEVAE ILAQYGIEPH EYSPVVNALR KNPQAWLDFM MRFELGLEKP DPKRALQSAF TIAIAYVLGG FIPLLPYMLI PHAMDAVVAS
201: VVITLFALFI FGYAKGHFTG SKPLRSAFET AFIGAIASAA AFCLAKVVQH
Arabidopsis Description
VIT1Vacuolar iron transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUA5]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.