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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • mitochondrion 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:mitochondrion, secretory
BaCelLo:secretory
iPSORT:mitochondrion
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY51213 Canola extracellular 98.14 98.14
Bra025116.1-P Field mustard extracellular 97.52 97.52
CDY65418 Canola cytosol 80.12 87.76
AT2G03505.1 Thale cress extracellular 80.12 76.79
CDX96880 Canola extracellular 67.08 62.79
CDY33795 Canola extracellular 69.57 62.57
CDY34558 Canola extracellular 66.46 62.21
CDY16114 Canola extracellular 68.94 62.01
CDY16115 Canola extracellular 58.39 60.65
CDX98134 Canola extracellular 67.08 56.54
CDY36415 Canola extracellular 65.84 54.08
PGSC0003DMT400045877 Potato extracellular 35.4 53.27
KRG89485 Soybean extracellular 45.34 41.48
KRH50525 Soybean extracellular 45.96 40.44
KRH75030 Soybean extracellular 50.31 37.67
VIT_01s0011g00570.t01 Wine grape extracellular 43.48 36.27
KRH70882 Soybean extracellular 48.45 35.94
GSMUA_Achr7P26650_001 Banana extracellular 24.84 34.48
CDY26741 Canola extracellular 39.75 34.41
GSMUA_Achr1P04440_001 Banana endoplasmic reticulum, extracellular, vacuole 40.37 33.85
CDX83826 Canola extracellular 38.51 33.7
TraesCS5A01G393200.1 Wheat extracellular 34.78 33.53
TraesCS2A01G177600.1 Wheat endoplasmic reticulum, extracellular, vacuole 41.61 33.5
TraesCS2D01G185800.1 Wheat endoplasmic reticulum, extracellular, vacuole 40.99 33.33
CDX96707 Canola extracellular 37.89 32.97
TraesCS5B01G398000.1 Wheat extracellular 33.54 32.93
TraesCS5B01G399400.1 Wheat extracellular 32.3 32.91
GSMUA_Achr4P23440_001 Banana cytosol 30.43 32.67
CDX87201 Canola extracellular 40.37 32.66
CDY16822 Canola extracellular 40.37 32.66
TraesCS5D01G403000.1 Wheat extracellular 33.54 32.53
EER97492 Sorghum extracellular 39.13 32.47
CDY19232 Canola extracellular 37.89 32.45
CDY42854 Canola extracellular 39.13 32.31
TraesCS2B01G204700.1 Wheat endoplasmic reticulum, extracellular, vacuole 40.99 32.2
Os03t0756300-01 Rice extracellular 34.78 32.0
GSMUA_Achr4P32790_001 Banana endoplasmic reticulum, extracellular, plasma membrane 35.4 31.67
CDY40247 Canola endoplasmic reticulum, extracellular, vacuole 38.51 31.63
CDY23085 Canola extracellular, plasma membrane, vacuole 37.89 31.61
CDY02169 Canola extracellular 37.89 31.44
GSMUA_Achr9P07140_001 Banana extracellular 36.02 31.18
Zm00001d006776_P001 Maize endoplasmic reticulum, extracellular, vacuole 38.51 31.16
Zm00001d006777_P003 Maize endoplasmic reticulum, extracellular, vacuole 38.51 31.16
GSMUA_Achr8P28170_001 Banana extracellular 29.81 30.97
Os07t0600700-01 Rice extracellular 37.27 30.93
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 36.65 30.89
TraesCS6D01G099100.1 Wheat endoplasmic reticulum, extracellular, vacuole 36.02 30.53
HORVU4Hr1G028360.1 Barley peroxisome, plastid 23.6 30.16
GSMUA_Achr5P08900_001 Banana extracellular 35.4 30.0
Os01t0763900-01 Rice extracellular 37.89 29.47
CDY65205 Canola plasma membrane 36.02 29.29
TraesCS6A01G110400.1 Wheat endoplasmic reticulum, extracellular, vacuole 35.4 28.93
CDY04273 Canola extracellular 39.13 28.9
CDY07353 Canola extracellular 39.13 28.9
TraesCS6B01G138700.1 Wheat endoplasmic reticulum, extracellular, vacuole 35.4 28.79
Zm00001d022059_P001 Maize endoplasmic reticulum, extracellular 35.4 28.79
CDX69983 Canola extracellular 37.89 28.77
OQU87600 Sorghum extracellular 33.54 28.72
Os03t0421800-01 Rice endoplasmic reticulum, extracellular, vacuole 33.54 28.72
Zm00001d043361_P001 Maize endoplasmic reticulum, extracellular 33.54 28.72
CDY47296 Canola extracellular 21.12 28.57
CDY56715 Canola cytosol 19.88 28.32
CDX74636 Canola extracellular 20.5 27.73
TraesCS3A01G302400.1 Wheat extracellular 33.54 27.55
TraesCS3D01G299600.1 Wheat extracellular 33.54 27.55
EER92116 Sorghum endoplasmic reticulum, extracellular, vacuole 33.54 27.41
CDY47357 Canola endoplasmic reticulum, extracellular 31.68 27.27
CDY54140 Canola extracellular 35.4 27.27
Zm00001d047293_P001 Maize endoplasmic reticulum, extracellular, vacuole 32.92 27.04
HORVU1Hr1G077100.2 Barley endoplasmic reticulum, extracellular, vacuole 35.4 27.01
TraesCS1A01G332500.1 Wheat extracellular 34.78 26.79
CDY50312 Canola extracellular 35.4 26.51
CDY01142 Canola extracellular 31.06 26.45
TraesCS1D01G335200.1 Wheat endoplasmic reticulum, extracellular, vacuole 35.4 26.27
CDY40909 Canola endoplasmic reticulum, extracellular, plasma membrane 38.51 26.16
CDY21992 Canola cytosol 22.98 26.06
CDY48582 Canola cytosol 22.98 26.06
Zm00001d029539_P001 Maize endoplasmic reticulum, extracellular, vacuole 32.3 26.0
CDX99038 Canola extracellular 37.89 25.96
TraesCS1B01G346200.2 Wheat endoplasmic reticulum, extracellular, vacuole 33.54 25.84
Zm00001d013250_P003 Maize extracellular 35.4 25.45
Os05t0512600-01 Rice extracellular 36.02 25.44
GSMUA_Achr4P10810_001 Banana endoplasmic reticulum, nucleus, plasma membrane 37.89 25.1
Zm00001d010728_P005 Maize extracellular 33.54 24.66
Solyc04g005420.2.1 Tomato extracellular, vacuole 45.96 24.1
HORVU6Hr1G019780.4 Barley endoplasmic reticulum, extracellular 32.3 23.01
Zm00001d034062_P001 Maize cytosol, golgi, peroxisome 34.78 22.95
EES18492 Sorghum extracellular 32.3 22.71
CDX79873 Canola endoplasmic reticulum, extracellular, plasma membrane 24.22 21.79
CDY05067 Canola endoplasmic reticulum, extracellular 16.77 21.77
Zm00001d038682_P001 Maize extracellular 31.06 21.74
HORVU2Hr1G033470.1 Barley cytosol, plastid 39.75 21.55
KXG37528 Sorghum mitochondrion 35.4 21.51
HORVU5Hr1G096090.6 Barley plastid 31.06 21.37
CDX98264 Canola endoplasmic reticulum, extracellular, plasma membrane 22.36 21.18
CDX90730 Canola endoplasmic reticulum, extracellular 16.15 20.8
CDY70929 Canola extracellular 22.98 20.56
TraesCS5A01G548300.1 Wheat plasma membrane 24.84 20.41
CDY56240 Canola extracellular 21.74 20.23
TraesCS3B01G334200.1 Wheat golgi, nucleus, plasma membrane 34.16 20.0
CDY72034 Canola endoplasmic reticulum, extracellular 14.91 19.83
CDY29629 Canola extracellular 27.33 19.21
HORVU3Hr1G074010.3 Barley cytosol, plastid 34.16 18.9
CDX97778 Canola extracellular 26.71 18.78
CDY47016 Canola extracellular 39.75 17.2
CDX99818 Canola extracellular 27.95 15.25
CDY43335 Canola extracellular 27.33 14.92
CDY48334 Canola vacuole 27.95 14.33
CDX94970 Canola plastid 26.09 14.19
CDX90189 Canola extracellular 27.33 14.01
CDY64750 Canola endoplasmic reticulum, vacuole 25.47 13.62
CDY32184 Canola vacuole 25.47 11.61
CDY31085 Canola plastid 24.84 11.4
CDY56795 Canola cytosol, nucleus, plastid, vacuole 20.5 10.54
CDY37850 Canola vacuole 22.98 9.74
CDY43577 Canola vacuole 22.98 9.69
CDX87377 Canola endoplasmic reticulum, extracellular, vacuole 22.36 9.35
CDX88545 Canola endoplasmic reticulum, extracellular, vacuole 22.36 9.25
Protein Annotations
EnsemblPlants:CDY02987EnsemblPlantsGene:GSBRNA2T00115284001InterPro:X8PANTHER:PTHR32227PANTHER:PTHR32227:SF147PFAM:PF07983
ProteinID:CDY02987ProteinID:CDY02987.1SEG:segSignalP:SignalP-noTMSMART:SM00768UniParc:UPI0004EE9316
MapMan:35.1:::::
Description
BnaC07g22400D
Coordinates
chrLK031939:-:108622..110093
Molecular Weight (calculated)
16596.7 Da
IEP (calculated)
5.572
GRAVY (calculated)
0.084
Length
161 amino acids
Sequence
(BLAST)
001: MRMLLGLLFL LALTGNSRAT YCLCKDGVAE KDLQTSIDYA CGVLGDCNQI HEKGPCYQPN NVKGHCDWAV NSYFQRAGQV PGSCNFSGTA TTSPNPPSTV
101: VTGCIYPSSP GNAGTGAPGT PTFPGPPAFG PTGGFDPSGN DALSLITSIA LTLGFSVIVF L
Best Arabidopsis Sequence Match ( AT2G03505.4 )
(BLAST)
001: MRLLLSLLFL LALTTYSSAT YCLCRDGVGE KDLQTSIDYA CGVLKDCNPI HEKGPCYQPN TIKSHCDWAV NTYFQRFGQI SGSCNFSGTA TTSQNLPSTV
101: VTGCLYPSSP GSAGTTPTTG TPSGTQTFPG PPAFGPAGDF DPSGNNGAPS LFISIALSLG FSVVIAFL
Arabidopsis Description
At2g03505 [Source:UniProtKB/TrEMBL;Acc:Q6NPI4]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.