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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY43335 Canola extracellular 92.99 98.98
Bra010831.1-P Field mustard nucleus 83.76 91.32
CDY48334 Canola vacuole 85.35 85.35
CDX99818 Canola extracellular 78.98 84.07
AT1G29380.1 Thale cress extracellular 79.62 79.37
VIT_10s0003g02720.t01 Wine grape plastid 31.53 50.77
GSMUA_Achr3P31190_001 Banana cytosol, nucleus, plastid 22.93 48.32
CDX74636 Canola extracellular 17.2 45.38
CDY47296 Canola extracellular 16.88 44.54
KRH42964 Soybean extracellular 38.85 44.2
KRH59086 Soybean cytosol, mitochondrion, nucleus 34.08 43.32
KRH59084 Soybean extracellular 34.39 43.03
CDY56715 Canola cytosol 14.33 39.82
Solyc02g071200.2.1 Tomato extracellular 37.9 39.27
KRH37784 Soybean extracellular 39.81 38.34
KRH12824 Soybean extracellular, vacuole 39.49 38.27
CDX90730 Canola endoplasmic reticulum, extracellular 14.65 36.8
CDY05067 Canola endoplasmic reticulum, extracellular 14.33 36.29
TraesCS1D01G428500.1 Wheat cytosol, mitochondrion, peroxisome 24.84 35.94
CDY48582 Canola cytosol 16.24 35.92
CDY21992 Canola cytosol 16.24 35.92
Os01t0631500-01 Rice extracellular 31.85 35.84
CDY72034 Canola endoplasmic reticulum, extracellular 13.69 35.54
CDX97778 Canola extracellular 24.84 34.06
CDY29629 Canola extracellular 24.84 34.06
EES20007 Sorghum extracellular, vacuole 26.43 33.6
CDY01142 Canola extracellular 19.75 32.8
GSMUA_Achr4P14960_001 Banana endoplasmic reticulum, extracellular 24.84 32.77
Zm00001d011431_P001 Maize plasma membrane 31.85 32.36
CDY47357 Canola endoplasmic reticulum, extracellular 19.11 32.09
EES01128 Sorghum extracellular 31.53 31.94
Zm00001d009686_P002 Maize extracellular 24.84 31.84
TraesCS3A01G227300.1 Wheat extracellular 33.76 31.83
HORVU1Hr1G091830.4 Barley extracellular 26.43 31.44
Os05t0581900-01 Rice extracellular 28.03 31.32
CDY19232 Canola extracellular 18.47 30.85
TraesCS1B01G451800.1 Wheat endoplasmic reticulum, plasma membrane 26.11 30.83
CDY26741 Canola extracellular 18.15 30.65
TraesCS3B01G257100.1 Wheat extracellular 33.12 30.5
CDY16115 Canola extracellular 14.97 30.32
TraesCS1A01G420600.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 25.8 30.11
CDX83826 Canola extracellular 17.52 29.89
Zm00001d039139_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 24.52 29.73
CDX96707 Canola extracellular 17.52 29.73
HORVU3Hr1G056800.1 Barley extracellular 33.44 29.58
CDX94970 Canola plastid 27.71 29.39
CDY64750 Canola endoplasmic reticulum, vacuole 28.03 29.24
CDY65205 Canola plasma membrane 18.15 28.79
CDY54140 Canola extracellular 19.11 28.71
CDY23085 Canola extracellular, plasma membrane, vacuole 17.52 28.5
CDY16114 Canola extracellular 16.24 28.49
CDY33795 Canola extracellular 16.24 28.49
CDY34558 Canola extracellular 15.61 28.49
CDY07353 Canola extracellular 19.75 28.44
CDY56240 Canola extracellular 15.61 28.32
CDX98264 Canola endoplasmic reticulum, extracellular, plasma membrane 15.29 28.24
CDY42854 Canola extracellular 17.52 28.21
CDY40247 Canola endoplasmic reticulum, extracellular, vacuole 17.52 28.06
CDY04273 Canola extracellular 19.43 27.98
CDX79873 Canola endoplasmic reticulum, extracellular, plasma membrane 15.92 27.93
CDY50312 Canola extracellular 19.11 27.91
CDX96880 Canola extracellular 15.29 27.91
CDY02987 Canola extracellular 14.01 27.33
CDY02169 Canola extracellular 16.88 27.32
CDY70929 Canola extracellular 15.61 27.22
CDY16822 Canola extracellular 17.2 27.14
CDX87201 Canola extracellular 17.2 27.14
CDY51213 Canola extracellular 13.69 26.71
CDY65418 Canola cytosol 12.42 26.53
CDX69983 Canola extracellular 17.83 26.42
CDY31085 Canola plastid 28.98 25.93
CDY32184 Canola vacuole 28.98 25.78
CDX98134 Canola extracellular 15.61 25.65
CDY40909 Canola endoplasmic reticulum, extracellular, plasma membrane 18.79 24.89
CDY36415 Canola extracellular 15.29 24.49
CDX99038 Canola extracellular 18.15 24.26
CDY56795 Canola cytosol, nucleus, plastid, vacuole 20.7 20.77
CDY37850 Canola vacuole 21.02 17.37
CDY43577 Canola vacuole 21.02 17.28
CDX88545 Canola endoplasmic reticulum, extracellular, vacuole 21.34 17.22
CDX87377 Canola endoplasmic reticulum, extracellular, vacuole 21.02 17.14
CDY47016 Canola extracellular 17.52 14.78
Protein Annotations
EnsemblPlants:CDX90189EnsemblPlantsGene:GSBRNA2T00150740001InterPro:X8PANTHER:PTHR32227PANTHER:PTHR32227:SF118PFAM:PF07983
ProteinID:CDX90189ProteinID:CDX90189.1SEG:segSignalP:SignalP-noTMSMART:SM00768UniParc:UPI0004EEBDE5
MapMan:35.1:::::
Description
BnaA08g17950D
Coordinates
chrLK031862:+:562248..565370
Molecular Weight (calculated)
30971.7 Da
IEP (calculated)
4.572
GRAVY (calculated)
-0.269
Length
314 amino acids
Sequence
(BLAST)
001: MAHIVARRYF QIMLLCLLIS SPLDVIAQGG QGDIPVVNPT SPGGDTTTPT ITQPSPPSST FPGPVTNPNP PTGGYPPLDG TTPTGGGYPP LDGTTPTGGG
101: GYPPLDGTTP TGGGAPGGGG GDTGTGAGGG DTGGGGGGGG GSGQWCIAKA NASPTSLQVA LDYACGYGGA DCGQIQQGAS CYEPNTIRDH ASFAFNSYYQ
201: KHPGSDSCNF GGAAQLTSTD PSKGSCRFSA SSGTVSTSPP SQPSPPDFNS PPSSSTFPPP ITTPTTGMPG SGPPFGVAEP TGLPSSATHA SHSFFISLFT
301: AVGILVPLLR QYYL
Best Arabidopsis Sequence Match ( AT1G29380.1 )
(BLAST)
001: MTHRIAPRCF STIMLLCLLY TSPLDVIAQG QGGQGDIPVV NPTAPGGSTT TPTITQPSPP SLTFPGPTTP TGGYPPLDGT TPTGGYPPLY GTTPPGGGDV
101: GGGGGGYGGG TPGGGGGGGG DTGAGAGGGG YGGGGDTGAG GGVGSGQWCI AKANASPTSL QVALDYACGY GGADCGQIQQ GAACYEPNTI RDHASFAFNS
201: YYQKHPGSDS CNFGGAAQLT STDPSKGSCH FSSSSGTVST SPPSQMSPPD FSSPPSSTYP PPITTPTTGI TGSGPPFGVA EPTGLPNSAT SVSHSLLSIF
301: TAVGILMPLL RENYL
Arabidopsis Description
Beta-1,3 glucanase [Source:UniProtKB/TrEMBL;Acc:Q6DST9]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.