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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra029334.1-P Field mustard extracellular 50.0 95.38
CDY42854 Canola extracellular 50.0 95.38
CDY23085 Canola extracellular, plasma membrane, vacuole 44.62 86.01
CDY02169 Canola extracellular 44.09 84.54
CDX87201 Canola extracellular 44.09 82.41
CDY16822 Canola extracellular 43.55 81.41
AT5G61130.1 Thale cress extracellular 41.94 77.61
CDX69983 Canola extracellular 33.6 58.96
CDY26741 Canola extracellular 27.69 55.38
CDY19232 Canola extracellular 27.69 54.79
CDX83826 Canola extracellular 26.88 54.35
CDX96707 Canola extracellular 26.61 53.51
CDX99038 Canola extracellular 33.6 53.19
GSMUA_Achr7P26650_001 Banana extracellular 14.25 45.69
GSMUA_Achr4P23440_001 Banana cytosol 18.28 45.33
CDY16115 Canola extracellular 18.55 44.52
GSMUA_Achr9P07140_001 Banana extracellular 21.77 43.55
GSMUA_Achr4P32790_001 Banana endoplasmic reticulum, extracellular, plasma membrane 20.97 43.33
CDY16114 Canola extracellular 20.7 43.02
CDY34558 Canola extracellular 19.62 42.44
TraesCS2D01G185800.1 Wheat endoplasmic reticulum, extracellular, vacuole 22.31 41.92
CDY33795 Canola extracellular 20.16 41.9
Os07t0600700-01 Rice extracellular 21.77 41.75
CDX96880 Canola extracellular 19.09 41.28
GSMUA_Achr1P04440_001 Banana endoplasmic reticulum, extracellular, vacuole 21.24 41.15
TraesCS5B01G399400.1 Wheat extracellular 17.47 41.14
TraesCS2A01G177600.1 Wheat endoplasmic reticulum, extracellular, vacuole 22.04 41.0
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 20.97 40.84
EER97492 Sorghum extracellular 21.24 40.72
Zm00001d006776_P001 Maize endoplasmic reticulum, extracellular, vacuole 21.51 40.2
Zm00001d006777_P003 Maize endoplasmic reticulum, extracellular, vacuole 21.51 40.2
CDY02987 Canola extracellular 17.2 39.75
CDY51213 Canola extracellular 17.2 39.75
TraesCS5B01G398000.1 Wheat extracellular 17.47 39.63
TraesCS2B01G204700.1 Wheat endoplasmic reticulum, extracellular, vacuole 21.77 39.51
Os03t0756300-01 Rice extracellular 18.55 39.43
Zm00001d022059_P001 Maize endoplasmic reticulum, extracellular 20.7 38.89
CDX98134 Canola extracellular 19.62 38.22
GSMUA_Achr5P08900_001 Banana extracellular 19.35 37.89
TraesCS6D01G099100.1 Wheat endoplasmic reticulum, extracellular, vacuole 19.35 37.89
Os03t0421800-01 Rice endoplasmic reticulum, extracellular, vacuole 19.09 37.77
Zm00001d043361_P001 Maize endoplasmic reticulum, extracellular 19.09 37.77
CDY36415 Canola extracellular 19.89 37.76
TraesCS5A01G393200.1 Wheat extracellular 16.94 37.72
CDY65418 Canola cytosol 14.78 37.41
TraesCS6B01G138700.1 Wheat endoplasmic reticulum, extracellular, vacuole 19.62 36.87
GSMUA_Achr8P28170_001 Banana extracellular 15.32 36.77
TraesCS5D01G403000.1 Wheat extracellular 16.4 36.75
OQU87600 Sorghum extracellular 18.55 36.7
TraesCS6A01G110400.1 Wheat endoplasmic reticulum, extracellular, vacuole 19.09 36.04
HORVU4Hr1G028360.1 Barley peroxisome, plastid 12.1 35.71
Os01t0763900-01 Rice extracellular 19.62 35.27
CDY40247 Canola endoplasmic reticulum, extracellular, vacuole 18.55 35.2
CDY65205 Canola plasma membrane 18.55 34.85
TraesCS3A01G302400.1 Wheat extracellular 17.47 33.16
Zm00001d047293_P001 Maize endoplasmic reticulum, extracellular, vacuole 17.47 33.16
EER92116 Sorghum endoplasmic reticulum, extracellular, vacuole 17.47 32.99
TraesCS3D01G299600.1 Wheat extracellular 17.2 32.65
Zm00001d029539_P001 Maize endoplasmic reticulum, extracellular, vacuole 17.47 32.5
GSMUA_Achr4P10810_001 Banana endoplasmic reticulum, nucleus, plasma membrane 20.7 31.69
CDX74636 Canola extracellular 9.95 31.09
HORVU1Hr1G077100.2 Barley endoplasmic reticulum, extracellular, vacuole 17.47 30.81
Os05t0512600-01 Rice extracellular 18.82 30.7
CDY01142 Canola extracellular 15.59 30.69
Zm00001d010728_P005 Maize extracellular 18.01 30.59
HORVU6Hr1G019780.4 Barley endoplasmic reticulum, extracellular 18.55 30.53
CDY47357 Canola endoplasmic reticulum, extracellular 15.32 30.48
Zm00001d013250_P003 Maize extracellular 18.28 30.36
CDY04273 Canola extracellular 17.74 30.28
CDY07353 Canola extracellular 17.74 30.28
CDY47296 Canola extracellular 9.68 30.25
CDY54140 Canola extracellular 16.94 30.14
TraesCS1B01G346200.2 Wheat endoplasmic reticulum, extracellular, vacuole 16.67 29.67
CDY50312 Canola extracellular 16.94 29.3
EES18492 Sorghum extracellular 18.01 29.26
CDY56715 Canola cytosol 8.87 29.2
TraesCS1A01G332500.1 Wheat extracellular 16.13 28.71
TraesCS1D01G335200.1 Wheat endoplasmic reticulum, extracellular, vacuole 16.67 28.57
CDY40909 Canola endoplasmic reticulum, extracellular, plasma membrane 18.01 28.27
HORVU2Hr1G033470.1 Barley cytosol, plastid 22.31 27.95
Zm00001d038682_P001 Maize extracellular 16.94 27.39
Zm00001d034062_P001 Maize cytosol, golgi, peroxisome 17.47 26.64
CDY05067 Canola endoplasmic reticulum, extracellular 8.87 26.61
TraesCS5A01G548300.1 Wheat plasma membrane 13.98 26.53
CDY72034 Canola endoplasmic reticulum, extracellular 8.6 26.45
CDX90730 Canola endoplasmic reticulum, extracellular 8.87 26.4
KXG37528 Sorghum mitochondrion 18.28 25.66
CDY21992 Canola cytosol 9.68 25.35
CDY48582 Canola cytosol 9.68 25.35
HORVU5Hr1G096090.6 Barley plastid 15.86 25.21
CDX79873 Canola endoplasmic reticulum, extracellular, plasma membrane 11.83 24.58
CDX98264 Canola endoplasmic reticulum, extracellular, plasma membrane 11.02 24.12
TraesCS3B01G334200.1 Wheat golgi, nucleus, plasma membrane 17.74 24.0
CDY56240 Canola extracellular 10.75 23.12
CDY70929 Canola extracellular 11.02 22.78
HORVU3Hr1G074010.3 Barley cytosol, plastid 17.74 22.68
CDX99818 Canola extracellular 14.78 18.64
CDY43335 Canola extracellular 14.25 17.97
CDX90189 Canola extracellular 14.78 17.52
CDY48334 Canola vacuole 14.78 17.52
CDX97778 Canola extracellular 10.75 17.47
CDY29629 Canola extracellular 10.75 17.47
CDY64750 Canola endoplasmic reticulum, vacuole 13.71 16.94
CDX94970 Canola plastid 13.44 16.89
CDY31085 Canola plastid 13.71 14.53
CDY32184 Canola vacuole 13.44 14.16
CDY56795 Canola cytosol, nucleus, plastid, vacuole 10.22 12.14
CDY37850 Canola vacuole 11.02 10.79
CDY43577 Canola vacuole 11.02 10.73
CDX87377 Canola endoplasmic reticulum, extracellular, vacuole 10.75 10.39
CDX88545 Canola endoplasmic reticulum, extracellular, vacuole 10.75 10.28
Protein Annotations
EnsemblPlants:CDY47016EnsemblPlantsGene:GSBRNA2T00086527001InterPro:X8PANTHER:PTHR32227PANTHER:PTHR32227:SF237PFAM:PF07983
ProteinID:CDY47016ProteinID:CDY47016.1SEG:segSignalP:SignalP-noTMSMART:SM00768UniParc:UPI0004EF1380
UniProt:A0A078IB20MapMan:35.1::::
Description
BnaC02g42010DBnaC02g42010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IB20]
Coordinates
chrLK032694:-:121494..125105
Molecular Weight (calculated)
39225.9 Da
IEP (calculated)
7.055
GRAVY (calculated)
-0.581
Length
372 amino acids
Sequence
(BLAST)
001: MAALVLSLLL LAMAGHSSAA WCVCKTGLSD DVLQKTIDYA CGNGADCNPT HPKAPCFNPD NVRSHCNYAV NSFFQKKRQA SGTCDFSGTA TPTNSDPSYS
101: GCTFPTSASG SGGSTTGTTN PKGNSTSTTL PGGNSPYSGT STNGVFGNNS TGATGTGVNP DYTTESSAFA LKNSRKLLTF LVLIASIDQR GKFGVREKSH
201: KQEVRLCSSS ERERDEHKIC FLHPKKTIIF SSLFLLSSQD NGSGSETGSE TALPPSSSSS TEKSVTSYKK KNTKPCKICG SNEDDDDVIK CHEPSWWLCE
301: VCRTLPGVVE VKPEDSNETA NSVLPNDSVS SSSSRVDAQN SAYNSSSTAS INTSPEKKRA DSNAPSDSES SK
Best Arabidopsis Sequence Match ( AT1G18650.1 )
(BLAST)
001: MAVFVLVMIL LAMAGHSSGT WCVCKEGLSE AMLQKTLDYA CGAGADCGPI HQTGPCFNPN TVKSHCSYAV NSFFQKKGQS LGTCDFAGTA TFSASDPSYT
101: TCPFPASASG SGTTTPVTTT PSTRVPTTTN TRPYTITPST GGGLGIPSGI NPDYTDPSFG FKLQSPRFGF IVLFTLFLPF YLFS
Arabidopsis Description
PDCB3PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ86]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.