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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • golgi 5
  • plasma membrane 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d022059_P001 Maize endoplasmic reticulum, extracellular 88.66 86.87
Zm00001d006777_P003 Maize endoplasmic reticulum, extracellular, vacuole 87.11 84.92
Zm00001d006776_P001 Maize endoplasmic reticulum, extracellular, vacuole 87.11 84.92
Os07t0600700-01 Rice extracellular 70.62 70.62
TraesCS2D01G185800.1 Wheat endoplasmic reticulum, extracellular, vacuole 67.01 65.66
TraesCS2A01G177600.1 Wheat endoplasmic reticulum, extracellular, vacuole 67.01 65.0
TraesCS2B01G204700.1 Wheat endoplasmic reticulum, extracellular, vacuole 66.49 62.93
EER92116 Sorghum endoplasmic reticulum, extracellular, vacuole 56.19 55.33
KRH54678 Soybean extracellular, nucleus 31.44 54.95
GSMUA_Achr9P07140_001 Banana extracellular 46.39 48.39
GSMUA_Achr1P04440_001 Banana endoplasmic reticulum, extracellular, vacuole 46.39 46.88
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 45.36 46.07
HORVU2Hr1G033470.1 Barley cytosol, plastid 69.59 45.45
GSMUA_Achr5P08900_001 Banana extracellular 43.81 44.74
GSMUA_Achr7P26650_001 Banana extracellular 26.29 43.97
VIT_17s0000g07260.t01 Wine grape extracellular 46.39 43.48
OQU87600 Sorghum extracellular 41.24 42.55
Solyc03g115200.2.1 Tomato extracellular 40.72 42.25
PGSC0003DMT400045877 Potato extracellular 23.2 42.06
KRH03122 Soybean extracellular, nucleus 43.81 41.87
PGSC0003DMT400063348 Potato extracellular 39.69 41.62
CDX96707 Canola extracellular 39.69 41.62
CDY16114 Canola extracellular 38.14 41.34
CDX83826 Canola extracellular 39.18 41.3
GSMUA_Achr8P28170_001 Banana extracellular 32.99 41.29
CDY42854 Canola extracellular 41.24 41.03
KRH50525 Soybean extracellular 38.66 40.98
Bra026880.1-P Field mustard extracellular 37.63 40.78
CDY33795 Canola extracellular 37.63 40.78
PGSC0003DMT400072939 Potato extracellular 43.3 40.78
CDY19232 Canola extracellular 39.18 40.43
CDY51213 Canola extracellular 33.51 40.37
KRG89485 Soybean extracellular 36.6 40.34
PGSC0003DMT400003054 Potato extracellular 39.69 40.31
Bra026879.1-P Field mustard extracellular 29.38 40.14
Bra029334.1-P Field mustard extracellular 40.21 40.0
CDY16115 Canola extracellular 31.96 40.0
CDY26741 Canola extracellular 38.14 39.78
Bra025116.1-P Field mustard extracellular 32.99 39.75
AT1G18650.1 Thale cress extracellular 37.63 39.67
Solyc01g010310.2.1 Tomato extracellular 38.14 39.15
CDY02987 Canola extracellular 32.47 39.13
Solyc05g012380.2.1 Tomato extracellular 40.72 39.11
VIT_01s0011g00570.t01 Wine grape extracellular 38.66 38.86
CDY23085 Canola extracellular, plasma membrane, vacuole 38.66 38.86
CDY65418 Canola cytosol 29.38 38.78
CDY02169 Canola extracellular 38.66 38.66
KRH56823 Soybean extracellular 42.27 38.5
CDY34558 Canola extracellular 34.02 38.37
AT2G03505.1 Thale cress extracellular 32.99 38.1
CDX96880 Canola extracellular 33.51 37.79
Bra016724.1-P Field mustard extracellular 33.51 37.79
Bra026878.1-P Field mustard extracellular 27.32 37.59
CDX87201 Canola extracellular 38.14 37.19
Bra035941.1-P Field mustard extracellular 37.63 36.68
CDY16822 Canola extracellular 37.63 36.68
Bra019700.1-P Field mustard extracellular 37.11 36.55
KRH70882 Soybean extracellular 40.72 36.41
AT5G61130.1 Thale cress extracellular 37.63 36.32
KRH75030 Soybean extracellular 40.21 36.28
CDY04273 Canola extracellular 40.72 36.24
Bra004003.1-P Field mustard extracellular 40.21 35.78
CDY07353 Canola extracellular 40.21 35.78
CDY40247 Canola endoplasmic reticulum, extracellular, vacuole 36.08 35.71
Bra012458.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 36.08 35.71
CDY36415 Canola extracellular 36.08 35.71
CDX98134 Canola extracellular 35.05 35.6
CDX69983 Canola extracellular 38.14 34.91
Bra009313.1-P Field mustard extracellular 38.14 34.91
GSMUA_Achr4P10810_001 Banana endoplasmic reticulum, nucleus, plasma membrane 43.3 34.57
CDY65205 Canola plasma membrane 35.05 34.34
EES05109 Sorghum extracellular, plasma membrane 33.51 33.85
Bra012981.1-P Field mustard extracellular, vacuole 38.66 33.78
CDY54140 Canola extracellular 36.08 33.49
AT5G08000.2 Thale cress extracellular 36.6 33.33
EES18492 Sorghum extracellular 39.18 33.19
CDY50312 Canola extracellular 36.6 33.02
AT1G26450.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 32.99 32.49
AT1G69295.1 Thale cress extracellular 36.6 31.98
CDY40909 Canola endoplasmic reticulum, extracellular, plasma membrane 38.14 31.22
CDX99038 Canola extracellular 37.63 31.06
OQU76517 Sorghum extracellular 27.32 30.46
Bra038314.1-P Field mustard mitochondrion 34.54 29.65
AT1G13830.2 Thale cress mitochondrion, peroxisome, plastid, vacuole 31.44 28.91
KXG37528 Sorghum mitochondrion 36.08 26.42
OQU88437 Sorghum extracellular 23.2 25.57
EES20007 Sorghum extracellular, vacuole 31.44 24.7
Solyc04g005420.2.1 Tomato extracellular, vacuole 38.14 24.1
EES01128 Sorghum extracellular 34.02 21.29
CDY47016 Canola extracellular 40.72 21.24
EER90180 Sorghum extracellular, plasma membrane 23.2 20.18
KXG27714 Sorghum vacuole 26.8 15.07
KXG27096 Sorghum extracellular, vacuole 26.29 11.97
EER90586 Sorghum extracellular 28.87 9.11
KXG36188 Sorghum cytosol, endoplasmic reticulum, vacuole 25.26 9.04
Protein Annotations
MapMan:35.1EntrezGene:8060650UniProt:C5XDT7EnsemblPlants:EER97492ProteinID:EER97492ProteinID:EER97492.1
GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005488GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0030246GO:GO:0030247
GO:GO:0046658PFAM:PF07983PANTHER:PTHR32227PANTHER:PTHR32227:SF237SMART:SM00768EnsemblPlantsGene:SORBI_3002G366000
unigene:Sbi.4922SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001A83846InterPro:X8RefSeq:XP_002460971.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr2:+:72600503..72604304
Molecular Weight (calculated)
18898.2 Da
IEP (calculated)
5.508
GRAVY (calculated)
0.186
Length
194 amino acids
Sequence
(BLAST)
001: MKALVVTVLL LLSSTLAVSQ WCVCRQDATQ AALQKTIDYA CGSGADCNSI HENGACYNPN TVPAHCSWAA NSYYQNNKAK GATCDFTGTA TLTTSDPSSS
101: GCSYPTSASA AGTMTPTTGG TMGGTPGTFT PGTGTGTTGT GMGTGTATGT TGFGGLGPGT NAGMDTAAAA GLLLPTAGLA TALAALLFSA IVLA
Best Arabidopsis Sequence Match ( AT1G18650.1 )
(BLAST)
001: MAVFVLVMIL LAMAGHSSGT WCVCKEGLSE AMLQKTLDYA CGAGADCGPI HQTGPCFNPN TVKSHCSYAV NSFFQKKGQS LGTCDFAGTA TFSASDPSYT
101: TCPFPASASG SGTTTPVTTT PSTRVPTTTN TRPYTITPST GGGLGIPSGI NPDYTDPSFG FKLQSPRFGF IVLFTLFLPF YLFS
Arabidopsis Description
PDCB3PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ86]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.