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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • golgi 5
  • plasma membrane 6
  • endoplasmic reticulum 6
  • vacuole 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400063348 Potato extracellular 94.12 95.14
KRH54678 Soybean extracellular, nucleus 43.32 72.97
VIT_17s0000g07260.t01 Wine grape extracellular 66.31 59.9
KRH03122 Soybean extracellular, nucleus 63.64 58.62
GSMUA_Achr4P23440_001 Banana cytosol 46.52 58.0
KRH56823 Soybean extracellular 60.43 53.05
AT1G18650.1 Thale cress extracellular 51.87 52.72
GSMUA_Achr4P32790_001 Banana endoplasmic reticulum, extracellular, plasma membrane 50.27 52.22
GSMUA_Achr1P04440_001 Banana endoplasmic reticulum, extracellular, vacuole 52.94 51.56
GSMUA_Achr9P07140_001 Banana extracellular 50.27 50.54
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 51.34 50.26
CDY26741 Canola extracellular 49.2 49.46
CDY19232 Canola extracellular 49.2 48.94
CDX83826 Canola extracellular 48.13 48.91
CDX96707 Canola extracellular 48.13 48.65
GSMUA_Achr5P08900_001 Banana extracellular 48.66 47.89
GSMUA_Achr7P26650_001 Banana extracellular 28.34 45.69
GSMUA_Achr8P28170_001 Banana extracellular 37.43 45.16
Solyc01g010310.2.1 Tomato extracellular 44.38 43.92
Os07t0600700-01 Rice extracellular 43.85 42.27
TraesCS2D01G185800.1 Wheat endoplasmic reticulum, extracellular, vacuole 44.38 41.92
TraesCS5B01G399400.1 Wheat extracellular 35.29 41.77
Os03t0756300-01 Rice extracellular 38.5 41.14
TraesCS2A01G177600.1 Wheat endoplasmic reticulum, extracellular, vacuole 43.85 41.0
TraesCS5B01G398000.1 Wheat extracellular 35.83 40.85
EER97492 Sorghum extracellular 42.25 40.72
TraesCS2B01G204700.1 Wheat endoplasmic reticulum, extracellular, vacuole 43.85 40.0
TraesCS5D01G403000.1 Wheat extracellular 35.29 39.76
Zm00001d043361_P001 Maize endoplasmic reticulum, extracellular 39.57 39.36
TraesCS5A01G393200.1 Wheat extracellular 34.76 38.92
Zm00001d022059_P001 Maize endoplasmic reticulum, extracellular 41.18 38.89
Zm00001d006776_P001 Maize endoplasmic reticulum, extracellular, vacuole 40.64 38.19
Zm00001d006777_P003 Maize endoplasmic reticulum, extracellular, vacuole 40.64 38.19
Solyc05g012380.2.1 Tomato extracellular 41.18 38.12
OQU87600 Sorghum extracellular 37.97 37.77
EER92116 Sorghum endoplasmic reticulum, extracellular, vacuole 39.57 37.56
TraesCS6D01G099100.1 Wheat endoplasmic reticulum, extracellular, vacuole 37.97 37.37
HORVU4Hr1G028360.1 Barley peroxisome, plastid 25.13 37.3
TraesCS3D01G299600.1 Wheat extracellular 38.5 36.73
Os03t0421800-01 Rice endoplasmic reticulum, extracellular, vacuole 36.9 36.7
GSMUA_Achr4P10810_001 Banana endoplasmic reticulum, nucleus, plasma membrane 47.59 36.63
Os01t0763900-01 Rice extracellular 40.11 36.23
Zm00001d047293_P001 Maize endoplasmic reticulum, extracellular, vacuole 37.97 36.22
TraesCS3A01G302400.1 Wheat extracellular 37.97 36.22
TraesCS6B01G138700.1 Wheat endoplasmic reticulum, extracellular, vacuole 36.9 34.85
TraesCS6A01G110400.1 Wheat endoplasmic reticulum, extracellular, vacuole 36.36 34.52
Solyc11g012580.1.1 Tomato extracellular 21.39 34.19
Zm00001d029539_P001 Maize endoplasmic reticulum, extracellular, vacuole 36.36 34.0
Solyc07g047710.2.1 Tomato extracellular 20.32 33.33
HORVU1Hr1G077100.2 Barley endoplasmic reticulum, extracellular, vacuole 36.9 32.7
TraesCS1B01G346200.2 Wheat endoplasmic reticulum, extracellular, vacuole 36.36 32.54
TraesCS1A01G332500.1 Wheat extracellular 35.29 31.58
TraesCS1D01G335200.1 Wheat endoplasmic reticulum, extracellular, vacuole 35.83 30.88
Solyc09g091920.2.1 Tomato endoplasmic reticulum, extracellular 31.55 29.95
Zm00001d013250_P003 Maize extracellular 35.83 29.91
Os05t0512600-01 Rice extracellular 35.83 29.39
TraesCS5A01G548300.1 Wheat plasma membrane 30.48 29.08
HORVU2Hr1G033470.1 Barley cytosol, plastid 45.99 28.96
Zm00001d034062_P001 Maize cytosol, golgi, peroxisome 36.36 27.87
Solyc12g098410.1.1 Tomato endoplasmic reticulum, extracellular 28.34 26.77
Solyc04g005420.2.1 Tomato extracellular, vacuole 43.85 26.71
KXG37528 Sorghum mitochondrion 37.43 26.42
TraesCS3B01G334200.1 Wheat golgi, nucleus, plasma membrane 38.5 26.18
Zm00001d010728_P005 Maize extracellular 30.48 26.03
Solyc04g058080.2.1 Tomato extracellular 24.6 25.84
EES18492 Sorghum extracellular 31.02 25.33
HORVU6Hr1G019780.4 Barley endoplasmic reticulum, extracellular 30.48 25.22
Zm00001d038682_P001 Maize extracellular 30.48 24.78
HORVU5Hr1G096090.6 Barley plastid 30.48 24.36
Solyc07g056310.2.1 Tomato extracellular 32.09 24.29
HORVU3Hr1G074010.3 Barley cytosol, plastid 37.43 24.05
Solyc07g053430.2.1 Tomato endoplasmic reticulum, extracellular 25.13 20.89
Solyc02g071200.2.1 Tomato extracellular 31.55 19.47
Solyc05g016390.2.1 Tomato endoplasmic reticulum, extracellular 22.46 16.28
Solyc01g101120.2.1 Tomato endoplasmic reticulum, golgi 29.41 14.99
Solyc12g017360.1.1 Tomato cytosol, peroxisome, plastid 22.46 14.24
Protein Annotations
MapMan:35.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005488GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0009506GO:GO:0016020GO:GO:0016787GO:GO:0030246
GO:GO:0030247GO:GO:0046658UniProt:K4BL22PFAM:PF07983PANTHER:PTHR32227PANTHER:PTHR32227:SF118
SMART:SM00768SignalP:SignalP-noTMEnsemblPlantsGene:Solyc03g115200.2EnsemblPlants:Solyc03g115200.2.1TMHMM:TMhelixUniParc:UPI0002768790
InterPro:X8SEG:seg::::
Description
No Description!
Coordinates
chr3:-:64996900..65001005
Molecular Weight (calculated)
18891.2 Da
IEP (calculated)
6.870
GRAVY (calculated)
0.157
Length
187 amino acids
Sequence
(BLAST)
001: MSAFVFSLLI LAMAGHSNAA WCACKGLSDA VLQKTLDYAC GAGADCTPLH TNGPCFNPNT VRAHCNFAVN SYFQRKGQAT GSCDFSGTAT VTATDPSTAG
101: CVYPATASGT TPTTTGSTTQ TPSTTTTNTG GSPYVTNPGV LGGVNNGLGP SGAGMNTDIS HGGILLQQGN LFFSMTITII ISSLALF
Best Arabidopsis Sequence Match ( AT1G18650.1 )
(BLAST)
001: MAVFVLVMIL LAMAGHSSGT WCVCKEGLSE AMLQKTLDYA CGAGADCGPI HQTGPCFNPN TVKSHCSYAV NSFFQKKGQS LGTCDFAGTA TFSASDPSYT
101: TCPFPASASG SGTTTPVTTT PSTRVPTTTN TRPYTITPST GGGLGIPSGI NPDYTDPSFG FKLQSPRFGF IVLFTLFLPF YLFS
Arabidopsis Description
PDCB3PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ86]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.