Factsheet for TraesCS5D01G403000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G398000.1	Wheat	extracellular	93.98	95.12
TraesCS5A01G393200.1	Wheat	extracellular	90.36	89.82
TraesCS5B01G399400.1	Wheat	extracellular	79.52	83.54
HORVU4Hr1G028360.1	Barley	peroxisome, plastid	45.18	59.52
Os03t0756300-01	Rice	extracellular	59.64	56.57
KRH54678	Soybean	extracellular, nucleus	33.73	50.45
Zm00001d013250_P003	Maize	extracellular	63.25	46.88
HORVU5Hr1G096090.6	Barley	plastid	63.86	45.3
GSMUA_Achr4P32790_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	46.39	42.78
Zm00001d034062_P001	Maize	cytosol, golgi, peroxisome	62.65	42.62
KXG37528	Sorghum	mitochondrion	66.87	41.89
Bra026878.1-P	Field mustard	extracellular	33.73	39.72
PGSC0003DMT400045877	Potato	extracellular	25.3	39.25
CDY16115	Canola	extracellular	33.73	36.13
CDY26741	Canola	extracellular	40.36	36.02
TraesCS5D01G467200.1	Wheat	extracellular, plasma membrane	39.16	35.71
PGSC0003DMT400063348	Potato	extracellular	39.76	35.68
AT1G18650.1	Thale cress	extracellular	39.16	35.33
Solyc03g115200.2.1	Tomato	extracellular	39.76	35.29
Bra026879.1-P	Field mustard	extracellular	30.12	35.21
Bra025116.1-P	Field mustard	extracellular	33.73	34.78
CDY51213	Canola	extracellular	33.73	34.78
TraesCS3D01G299600.1	Wheat	extracellular	40.96	34.69
CDX83826	Canola	extracellular	37.95	34.24
CDY19232	Canola	extracellular	38.55	34.04
CDY02987	Canola	extracellular	32.53	33.54
KRG89485	Soybean	extracellular	35.54	33.52
CDX96707	Canola	extracellular	37.35	33.51
CDY02169	Canola	extracellular	38.55	32.99
KRH50525	Soybean	extracellular	36.14	32.79
AT2G03505.1	Thale cress	extracellular	33.13	32.74
CDX87201	Canola	extracellular	39.16	32.66
Bra035941.1-P	Field mustard	extracellular	39.16	32.66
CDY16822	Canola	extracellular	39.16	32.66
CDY65418	Canola	cytosol	28.92	32.65
KRH03122	Soybean	extracellular, nucleus	39.76	32.51
VIT_01s0011g00570.t01	Wine grape	extracellular	37.35	32.12
VIT_17s0000g07260.t01	Wine grape	extracellular	39.76	31.88
Bra026880.1-P	Field mustard	extracellular	34.34	31.84
CDY33795	Canola	extracellular	34.34	31.84
TraesCS6D01G099100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	36.14	31.58
CDY16114	Canola	extracellular	33.73	31.28
Bra029334.1-P	Field mustard	extracellular	36.75	31.28
CDY42854	Canola	extracellular	36.75	31.28
CDY23085	Canola	extracellular, plasma membrane, vacuole	36.14	31.09
PGSC0003DMT400003054	Potato	extracellular	35.54	30.89
AT5G61130.1	Thale cress	extracellular	37.35	30.85
Solyc05g012380.2.1	Tomato	extracellular	36.75	30.2
Solyc01g010310.2.1	Tomato	extracellular	34.34	30.16
KRH75030	Soybean	extracellular	38.55	29.77
CDX96880	Canola	extracellular	30.72	29.65
CDY34558	Canola	extracellular	30.72	29.65
Bra016724.1-P	Field mustard	extracellular	30.72	29.65
Bra012981.1-P	Field mustard	extracellular, vacuole	38.55	28.83
CDX98134	Canola	extracellular	33.13	28.8
TraesCS2D01G185800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	34.34	28.79
CDX69983	Canola	extracellular	36.75	28.77
Bra009313.1-P	Field mustard	extracellular	36.75	28.77
CDY36415	Canola	extracellular	33.73	28.57
PGSC0003DMT400072939	Potato	extracellular	34.94	28.16
TraesCS7D01G332800.1	Wheat	plasma membrane	30.12	28.09
TraesCS5D01G400600.1	Wheat	endoplasmic reticulum, extracellular, mitochondrion, nucleus	23.49	28.06
CDY65205	Canola	plasma membrane	33.13	27.78
KRH56823	Soybean	extracellular	35.54	27.7
KRH70882	Soybean	extracellular	36.14	27.65
Bra012458.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	32.53	27.55
CDY40247	Canola	endoplasmic reticulum, extracellular, vacuole	32.53	27.55
Bra019700.1-P	Field mustard	extracellular	32.53	27.41
AT1G26450.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	32.53	27.41
AT5G08000.2	Thale cress	extracellular	34.34	26.76
CDX99038	Canola	extracellular	37.35	26.38
Bra004003.1-P	Field mustard	extracellular	34.34	26.15
CDY07353	Canola	extracellular	34.34	26.15
TraesCS2D01G253000.1	Wheat	extracellular	27.11	26.01
CDY04273	Canola	extracellular	33.73	25.69
AT1G13830.2	Thale cress	mitochondrion, peroxisome, plastid, vacuole	32.53	25.59
CDY54140	Canola	extracellular	31.33	24.88
TraesCS1D01G335200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	31.93	24.42
CDY50312	Canola	extracellular	31.33	24.19
TraesCS1D01G428500.1	Wheat	cytosol, mitochondrion, peroxisome	30.72	23.5
CDY40909	Canola	endoplasmic reticulum, extracellular, plasma membrane	33.13	23.21
AT1G69295.1	Thale cress	extracellular	30.12	22.52
Bra038314.1-P	Field mustard	mitochondrion	30.12	22.12
Solyc04g005420.2.1	Tomato	extracellular, vacuole	33.73	18.24
TraesCS7D01G468800.1	Wheat	extracellular	22.89	17.12
CDY47016	Canola	extracellular	36.75	16.4
TraesCS2D01G423000.1	Wheat	extracellular, plasma membrane	31.33	14.61
TraesCS4D01G132800.1	Wheat	extracellular, plasma membrane, vacuole	26.51	13.33
TraesCS5D01G513400.1	Wheat	extracellular	28.92	11.79
TraesCS5D01G374100.1	Wheat	extracellular, vacuole	25.9	9.86

Protein Annotations

EnsemblPlants:TraesCS5D01G403000.1	EnsemblPlantsGene:TraesCS5D01G403000	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF98	PFAM:PF07983
SEG:seg	SignalP:SignalP-noTM	SMART:SM00768	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr5D:-:468840249..468841741

Molecular Weight (calculated)

17032.3 Da

IEP (calculated)

7.867

GRAVY (calculated)

0.116

Length

166 amino acids

Sequence
(BLAST)

001: MASHAGRLLL LLALAAALAG RSAEGAWCVC RPDLPDATLQ RTLDYACGSA ADCKPIQRNA ACFAPDTVKA HCSYAVNSYY QRSGQNPLAC VFSSTAVISS
101: TDPSTNGCKY PATPSAPDSP PPPMAQGPNG AQKDTSGGAD VLPVAGTARR VVILACCSLL ALYLMA

Best Arabidopsis Sequence Match ( AT1G18650.1 )
(BLAST)

001: MAVFVLVMIL LAMAGHSSGT WCVCKEGLSE AMLQKTLDYA CGAGADCGPI HQTGPCFNPN TVKSHCSYAV NSFFQKKGQS LGTCDFAGTA TFSASDPSYT
101: TCPFPASASG SGTTTPVTTT PSTRVPTTTN TRPYTITPST GGGLGIPSGI NPDYTDPSFG FKLQSPRFGF IVLFTLFLPF YLFS

Arabidopsis Description

PDCB3PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ86]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.