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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY26741 Canola extracellular 95.21 96.24
CDX83826 Canola extracellular 82.98 84.78
CDX96707 Canola extracellular 82.98 84.32
AT1G18650.1 Thale cress extracellular 82.45 84.24
KRH54678 Soybean extracellular, nucleus 42.02 71.17
VIT_17s0000g07260.t01 Wine grape extracellular 58.51 53.14
CDY42854 Canola extracellular 54.26 52.31
CDY23085 Canola extracellular, plasma membrane, vacuole 52.13 50.78
GSMUA_Achr4P23440_001 Banana cytosol 40.43 50.67
CDY02169 Canola extracellular 52.13 50.52
PGSC0003DMT400063348 Potato extracellular 49.47 50.27
CDX87201 Canola extracellular 53.19 50.25
CDY16822 Canola extracellular 53.19 50.25
GSMUA_Achr9P07140_001 Banana extracellular 49.47 50.0
KRH03122 Soybean extracellular, nucleus 53.19 49.26
Solyc03g115200.2.1 Tomato extracellular 48.94 49.2
GSMUA_Achr4P32790_001 Banana endoplasmic reticulum, extracellular, plasma membrane 46.28 48.33
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 47.34 46.6
GSMUA_Achr1P04440_001 Banana endoplasmic reticulum, extracellular, vacuole 47.34 46.35
GSMUA_Achr5P08900_001 Banana extracellular 45.74 45.26
GSMUA_Achr7P26650_001 Banana extracellular 27.66 44.83
GSMUA_Achr8P28170_001 Banana extracellular 36.17 43.87
KRH56823 Soybean extracellular 48.4 42.72
TraesCS5B01G399400.1 Wheat extracellular 35.11 41.77
CDX69983 Canola extracellular 46.81 41.51
Os03t0756300-01 Rice extracellular 37.77 40.57
TraesCS5B01G398000.1 Wheat extracellular 35.11 40.24
Os07t0600700-01 Rice extracellular 41.49 40.21
CDY16115 Canola extracellular 32.98 40.0
CDY16114 Canola extracellular 37.77 39.66
CDY34558 Canola extracellular 36.17 39.53
TraesCS2D01G185800.1 Wheat endoplasmic reticulum, extracellular, vacuole 41.49 39.39
CDY40247 Canola endoplasmic reticulum, extracellular, vacuole 40.96 39.29
EER97492 Sorghum extracellular 40.43 39.18
CDY51213 Canola extracellular 33.51 39.13
CDY33795 Canola extracellular 37.23 39.11
HORVU4Hr1G028360.1 Barley peroxisome, plastid 26.06 38.89
TraesCS5D01G403000.1 Wheat extracellular 34.04 38.55
TraesCS2A01G177600.1 Wheat endoplasmic reticulum, extracellular, vacuole 40.96 38.5
TraesCS6B01G138700.1 Wheat endoplasmic reticulum, extracellular, vacuole 40.43 38.38
CDX96880 Canola extracellular 35.11 38.37
TraesCS5A01G393200.1 Wheat extracellular 34.04 38.32
Os03t0421800-01 Rice endoplasmic reticulum, extracellular, vacuole 38.3 38.3
CDY65418 Canola cytosol 29.79 38.1
TraesCS6D01G099100.1 Wheat endoplasmic reticulum, extracellular, vacuole 38.3 37.89
CDY02987 Canola extracellular 32.45 37.89
TraesCS6A01G110400.1 Wheat endoplasmic reticulum, extracellular, vacuole 39.36 37.56
CDY65205 Canola plasma membrane 39.36 37.37
TraesCS2B01G204700.1 Wheat endoplasmic reticulum, extracellular, vacuole 40.43 37.07
CDX99038 Canola extracellular 45.74 36.6
Zm00001d022059_P001 Maize endoplasmic reticulum, extracellular 37.77 35.86
Zm00001d006776_P001 Maize endoplasmic reticulum, extracellular, vacuole 37.77 35.68
Zm00001d006777_P003 Maize endoplasmic reticulum, extracellular, vacuole 37.77 35.68
CDX98134 Canola extracellular 36.17 35.6
CDY36415 Canola extracellular 36.7 35.2
EER92116 Sorghum endoplasmic reticulum, extracellular, vacuole 36.7 35.03
Zm00001d043361_P001 Maize endoplasmic reticulum, extracellular 34.57 34.57
CDY56715 Canola cytosol 20.74 34.51
CDX74636 Canola extracellular 21.81 34.45
CDY47296 Canola extracellular 21.81 34.45
Os01t0763900-01 Rice extracellular 37.77 34.3
OQU87600 Sorghum extracellular 33.51 33.51
TraesCS3A01G302400.1 Wheat extracellular 34.57 33.16
TraesCS3D01G299600.1 Wheat extracellular 34.57 33.16
Zm00001d047293_P001 Maize endoplasmic reticulum, extracellular, vacuole 34.57 33.16
CDY04273 Canola extracellular 38.3 33.03
CDY07353 Canola extracellular 38.3 33.03
CDY54140 Canola extracellular 36.17 32.54
GSMUA_Achr4P10810_001 Banana endoplasmic reticulum, nucleus, plasma membrane 42.02 32.51
Zm00001d029539_P001 Maize endoplasmic reticulum, extracellular, vacuole 34.57 32.5
CDY40909 Canola endoplasmic reticulum, extracellular, plasma membrane 39.89 31.65
CDY50312 Canola extracellular 36.17 31.63
CDY47357 Canola endoplasmic reticulum, extracellular 31.38 31.55
Zm00001d013250_P003 Maize extracellular 37.23 31.25
CDY01142 Canola extracellular 31.38 31.22
HORVU1Hr1G077100.2 Barley endoplasmic reticulum, extracellular, vacuole 34.04 30.33
TraesCS1A01G332500.1 Wheat extracellular 33.51 30.14
CDY21992 Canola cytosol 22.34 29.58
CDY48582 Canola cytosol 22.34 29.58
Zm00001d034062_P001 Maize cytosol, golgi, peroxisome 38.3 29.51
Os05t0512600-01 Rice extracellular 35.64 29.39
TraesCS1B01G346200.2 Wheat endoplasmic reticulum, extracellular, vacuole 32.45 29.19
HORVU6Hr1G019780.4 Barley endoplasmic reticulum, extracellular 34.57 28.76
TraesCS1D01G335200.1 Wheat endoplasmic reticulum, extracellular, vacuole 32.98 28.57
CDY47016 Canola extracellular 54.79 27.69
TraesCS5A01G548300.1 Wheat plasma membrane 27.66 26.53
KXG37528 Sorghum mitochondrion 37.23 26.42
HORVU2Hr1G033470.1 Barley cytosol, plastid 41.49 26.26
HORVU5Hr1G096090.6 Barley plastid 32.45 26.07
CDY05067 Canola endoplasmic reticulum, extracellular 17.02 25.81
CDX90730 Canola endoplasmic reticulum, extracellular 17.02 25.6
CDY72034 Canola endoplasmic reticulum, extracellular 15.96 24.79
EES18492 Sorghum extracellular 29.79 24.45
CDX97778 Canola extracellular 29.26 24.02
CDY29629 Canola extracellular 29.26 24.02
TraesCS3B01G334200.1 Wheat golgi, nucleus, plasma membrane 35.11 24.0
Zm00001d038682_P001 Maize extracellular 29.26 23.91
Zm00001d010728_P005 Maize extracellular 27.66 23.74
CDX79873 Canola endoplasmic reticulum, extracellular, plasma membrane 21.81 22.91
HORVU3Hr1G074010.3 Barley cytosol, plastid 35.11 22.68
CDY56240 Canola extracellular 20.21 21.97
CDX98264 Canola endoplasmic reticulum, extracellular, plasma membrane 19.68 21.76
CDY70929 Canola extracellular 20.74 21.67
CDX99818 Canola extracellular 30.85 19.66
CDY43335 Canola extracellular 30.32 19.32
CDX94970 Canola plastid 29.26 18.58
CDX90189 Canola extracellular 30.85 18.47
CDY48334 Canola vacuole 30.85 18.47
CDY64750 Canola endoplasmic reticulum, vacuole 28.72 17.94
CDY32184 Canola vacuole 30.32 16.15
CDY31085 Canola plastid 29.79 15.95
CDY56795 Canola cytosol, nucleus, plastid, vacuole 20.21 12.14
CDY37850 Canola vacuole 22.87 11.32
CDY43577 Canola vacuole 22.87 11.26
CDX87377 Canola endoplasmic reticulum, extracellular, vacuole 21.81 10.65
CDX88545 Canola endoplasmic reticulum, extracellular, vacuole 21.81 10.54
Protein Annotations
EnsemblPlants:CDY19232EnsemblPlantsGene:GSBRNA2T00006536001GO:A0A078G2I1GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:X8PANTHER:PTHR32227PANTHER:PTHR32227:SF98PFAM:PF07983ProteinID:CDY19232ProteinID:CDY19232.1
SEG:segSignalP:SignalP-noTMSMART:SM00768TMHMM:TMhelixUniParc:UPI0004EC6E50UniProt:A0A078G2I1
MapMan:35.1:::::
Description
BnaC05g14330DBnaC05g14330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G2I1]
Coordinates
chrLK032093:-:384408..386277
Molecular Weight (calculated)
19611.1 Da
IEP (calculated)
7.308
GRAVY (calculated)
0.091
Length
188 amino acids
Sequence
(BLAST)
001: MAVVVVLAVI LLAMVGHSSG AWCVCREGLS EAMLQKTLDY ACGAGADCGP IHQNGPCFNP NTVKSHCSYA VNSFFQKKGQ SQGTCDFAGT ATVSASDPSY
101: TSCPFPASAS GSGTTTPVTT TPSTRVPTTT NTRPYTSSTG GGLGIPSGIP DYTDPSSGFK LHNPRDTTFF VSGLLVFFLF FFNSYLLS
Best Arabidopsis Sequence Match ( AT1G18650.1 )
(BLAST)
001: MAVFVLVMIL LAMAGHSSGT WCVCKEGLSE AMLQKTLDYA CGAGADCGPI HQTGPCFNPN TVKSHCSYAV NSFFQKKGQS LGTCDFAGTA TFSASDPSYT
101: TCPFPASASG SGTTTPVTTT PSTRVPTTTN TRPYTITPST GGGLGIPSGI NPDYTDPSFG FKLQSPRFGF IVLFTLFLPF YLFS
Arabidopsis Description
PDCB3PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ86]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.