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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra003318.1-P Field mustard extracellular 92.49 94.12
CDX98264 Canola endoplasmic reticulum, extracellular, plasma membrane 92.49 94.12
CDX79873 Canola endoplasmic reticulum, extracellular, plasma membrane 57.8 55.87
CDY70929 Canola extracellular 57.23 55.0
AT3G58100.2 Thale cress cytosol 73.99 50.0
VIT_12s0028g02540.t01 Wine grape extracellular 48.55 48.28
KRH25694 Soybean extracellular 44.51 44.51
KRH55823 Soybean extracellular 42.77 42.53
GSMUA_Achr10P... Banana extracellular 42.2 41.24
OQU76517 Sorghum extracellular 39.31 39.08
KRH27014 Soybean extracellular 39.31 38.86
Zm00001d046155_P001 Maize extracellular 39.31 38.64
TraesCS7D01G332800.1 Wheat plasma membrane 39.31 38.2
TraesCS7A01G346300.1 Wheat endoplasmic reticulum, plasma membrane 39.31 38.2
TraesCS7B01G236800.1 Wheat endoplasmic reticulum, extracellular 38.73 37.64
CDY56715 Canola cytosol 24.28 37.17
Os06t0537700-01 Rice extracellular 39.31 36.56
KRH22312 Soybean extracellular 37.57 35.52
Solyc07g053430.2.1 Tomato endoplasmic reticulum, extracellular 43.35 33.33
CDY48582 Canola cytosol 26.59 32.39
CDY21992 Canola cytosol 26.59 32.39
CDX74636 Canola extracellular 21.39 31.09
CDY47296 Canola extracellular 20.81 30.25
CDX90730 Canola endoplasmic reticulum, extracellular 21.39 29.6
HORVU0Hr1G021440.2 Barley plastid 26.59 29.11
CDY05067 Canola endoplasmic reticulum, extracellular 20.81 29.03
CDY72034 Canola endoplasmic reticulum, extracellular 19.65 28.1
CDY16115 Canola extracellular 21.39 23.87
CDY47357 Canola endoplasmic reticulum, extracellular 24.86 22.99
CDY01142 Canola extracellular 24.86 22.75
CDY65418 Canola cytosol 19.08 22.45
CDY16114 Canola extracellular 23.12 22.35
CDY33795 Canola extracellular 22.54 21.79
CDY02987 Canola extracellular 20.23 21.74
CDY51213 Canola extracellular 20.23 21.74
PGSC0003DMT400024290 Potato extracellular, vacuole 43.35 21.68
CDY16822 Canola extracellular 24.86 21.61
CDX87201 Canola extracellular 24.28 21.11
CDX96880 Canola extracellular 20.81 20.93
CDX69983 Canola extracellular 25.43 20.75
CDX83826 Canola extracellular 21.97 20.65
CDX96707 Canola extracellular 21.97 20.54
CDY42854 Canola extracellular 23.12 20.51
CDY19232 Canola extracellular 21.97 20.21
CDY02169 Canola extracellular 22.54 20.1
CDY26741 Canola extracellular 21.39 19.89
CDY34558 Canola extracellular 19.65 19.77
CDY23085 Canola extracellular, plasma membrane, vacuole 21.97 19.69
CDX99038 Canola extracellular 26.59 19.57
CDY54140 Canola extracellular 23.12 19.14
CDY29629 Canola extracellular 24.86 18.78
CDX97778 Canola extracellular 24.86 18.78
CDY50312 Canola extracellular 23.12 18.6
CDY07353 Canola extracellular 23.12 18.35
CDX98134 Canola extracellular 20.23 18.32
CDY04273 Canola extracellular 22.54 17.89
CDY36415 Canola extracellular 19.65 17.35
CDX99818 Canola extracellular 29.48 17.29
CDY43335 Canola extracellular 28.9 16.95
CDY40909 Canola endoplasmic reticulum, extracellular, plasma membrane 23.12 16.88
CDY40247 Canola endoplasmic reticulum, extracellular, vacuole 19.08 16.84
CDY65205 Canola plasma membrane 19.08 16.67
CDY48334 Canola vacuole 29.48 16.24
CDX94970 Canola plastid 27.75 16.22
CDY64750 Canola endoplasmic reticulum, vacuole 27.75 15.95
CDX90189 Canola extracellular 28.32 15.61
CDY31085 Canola plastid 26.59 13.11
CDY32184 Canola vacuole 26.59 13.03
CDY56795 Canola cytosol, nucleus, plastid, vacuole 20.81 11.5
CDY47016 Canola extracellular 23.12 10.75
CDY37850 Canola vacuole 20.81 9.47
CDY43577 Canola vacuole 20.81 9.42
CDX87377 Canola endoplasmic reticulum, extracellular, vacuole 19.08 8.57
CDX88545 Canola endoplasmic reticulum, extracellular, vacuole 19.08 8.48
Protein Annotations
EnsemblPlants:CDY56240EnsemblPlantsGene:GSBRNA2T00018003001GO:A0A078J298GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:X8PANTHER:PTHR32227PANTHER:PTHR32227:SF98PFAM:PF07983ProteinID:CDY56240ProteinID:CDY56240.1
SEG:segSignalP:SignalP-noTMSMART:SM00768TMHMM:TMhelixUniParc:UPI0004EE29F5UniProt:A0A078J298
MapMan:35.1:::::
Description
BnaA07g37930DBnaA07g37930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J298]
Coordinates
chrLK033471:+:6325..7565
Molecular Weight (calculated)
18491.9 Da
IEP (calculated)
6.218
GRAVY (calculated)
-0.007
Length
173 amino acids
Sequence
(BLAST)
001: MTLPKCFHLY LSLLAATATV LIAVADAQAG GQVLQAELWC VAKNNAEDSS LQTAIDWACG QGGADCGPIQ QGRACNDPTD IQKMASYVFN NYYLKNGLAD
101: DACNFNNNAA LTSINPSQGT CRYPSSKRVS NGRVADDTSV GGGQADMSHG RRVSTTWILL AFSILMVTWI IHL
Best Arabidopsis Sequence Match ( AT3G58100.2 )
(BLAST)
001: MIHPNLSLFH ETFQNILESI QIHSLVTVRS SSFSDTFNGN FLVLHCKISG YKKKTQNLLL NTPLLDLLPL SLLSSEMIMS LPQCSHLRLS ILAATAAMLM
101: VITTAQIGGQ VIQVELWCVA KNNAEDSSLQ TAIEWACGQG GADCGPIQQG GPCNDPTDVQ KMASFVFNNY YLKNGEEDEA CNFNNNAALT SLNPSQGTCK
201: YPSSKGANNG RLADDTSMGA GQADMSRGGR PISSSWMVTF IGFGSLLTMT WIIHHL
Arabidopsis Description
PDCB5Plasmodesmata callose-binding protein 5 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSI7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.