Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 3
- golgi 3
- plastid 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020023.1-P | Field mustard | endoplasmic reticulum, vacuole | 97.3 | 97.63 |
| CDY64750 | Canola | endoplasmic reticulum, vacuole | 96.28 | 94.68 |
| AT1G09460.1 | Thale cress | extracellular, vacuole | 86.15 | 77.27 |
| CDY31085 | Canola | plastid | 86.49 | 72.93 |
| CDY32184 | Canola | vacuole | 85.47 | 71.67 |
| CDY56715 | Canola | cytosol | 16.55 | 43.36 |
| CDY47296 | Canola | extracellular | 15.2 | 37.82 |
| CDX74636 | Canola | extracellular | 15.2 | 37.82 |
| CDY48582 | Canola | cytosol | 17.91 | 37.32 |
| CDY21992 | Canola | cytosol | 17.91 | 37.32 |
| CDX90730 | Canola | endoplasmic reticulum, extracellular | 15.54 | 36.8 |
| CDY72034 | Canola | endoplasmic reticulum, extracellular | 14.86 | 36.36 |
| CDY05067 | Canola | endoplasmic reticulum, extracellular | 15.2 | 36.29 |
| CDX97778 | Canola | extracellular | 26.35 | 34.06 |
| CDY29629 | Canola | extracellular | 26.35 | 34.06 |
| PGSC0003DMT400047134 | Potato | extracellular, golgi, vacuole | 40.54 | 33.15 |
| Solyc01g101120.2.1 | Tomato | endoplasmic reticulum, golgi | 40.54 | 32.7 |
| TraesCS4A01G178000.1 | Wheat | extracellular, plasma membrane, vacuole | 35.47 | 31.82 |
| TraesCS4B01G138000.1 | Wheat | extracellular, plasma membrane, vacuole | 35.14 | 31.52 |
| TraesCS4D01G132800.1 | Wheat | extracellular, plasma membrane, vacuole | 34.8 | 31.21 |
| CDY26741 | Canola | extracellular | 18.92 | 30.11 |
| CDY01142 | Canola | extracellular | 18.92 | 29.63 |
| CDY40247 | Canola | endoplasmic reticulum, extracellular, vacuole | 19.59 | 29.59 |
| KXG27714 | Sorghum | vacuole | 34.46 | 29.57 |
| CDY43335 | Canola | extracellular | 29.39 | 29.49 |
| CDX98264 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 16.89 | 29.41 |
| CDY47357 | Canola | endoplasmic reticulum, extracellular | 18.58 | 29.41 |
| Zm00001d004933_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 33.78 | 29.33 |
| CDY19232 | Canola | extracellular | 18.58 | 29.26 |
| CDY23085 | Canola | extracellular, plasma membrane, vacuole | 18.92 | 29.02 |
| CDX83826 | Canola | extracellular | 17.91 | 28.8 |
| CDY65205 | Canola | plasma membrane | 19.26 | 28.79 |
| CDY54140 | Canola | extracellular | 20.27 | 28.71 |
| CDX96707 | Canola | extracellular | 17.91 | 28.65 |
| CDX99818 | Canola | extracellular | 28.38 | 28.47 |
| CDY07353 | Canola | extracellular | 20.95 | 28.44 |
| CDX87201 | Canola | extracellular | 18.92 | 28.14 |
| CDY48334 | Canola | vacuole | 29.73 | 28.03 |
| CDY04273 | Canola | extracellular | 20.61 | 27.98 |
| CDY50312 | Canola | extracellular | 20.27 | 27.91 |
| CDY56240 | Canola | extracellular | 16.22 | 27.75 |
| CDX90189 | Canola | extracellular | 29.39 | 27.71 |
| CDY16822 | Canola | extracellular | 18.58 | 27.64 |
| CDY02169 | Canola | extracellular | 17.91 | 27.32 |
| CDY65418 | Canola | cytosol | 13.51 | 27.21 |
| CDY16115 | Canola | extracellular | 14.19 | 27.1 |
| CDX79873 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 16.22 | 26.82 |
| CDY33795 | Canola | extracellular | 15.88 | 26.26 |
| CDY40909 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 20.95 | 26.16 |
| CDY02987 | Canola | extracellular | 14.19 | 26.09 |
| CDY51213 | Canola | extracellular | 14.19 | 26.09 |
| CDY16114 | Canola | extracellular | 15.54 | 25.7 |
| CDY42854 | Canola | extracellular | 16.89 | 25.64 |
| CDY34558 | Canola | extracellular | 14.86 | 25.58 |
| CDY70929 | Canola | extracellular | 15.54 | 25.56 |
| CDY36415 | Canola | extracellular | 16.22 | 24.49 |
| CDX96880 | Canola | extracellular | 14.19 | 24.42 |
| TraesCS4A01G358500.1 | Wheat | extracellular | 33.78 | 24.39 |
| CDX98134 | Canola | extracellular | 15.54 | 24.08 |
| KRH33760 | Soybean | vacuole | 49.66 | 24.06 |
| CDX69983 | Canola | extracellular | 17.23 | 24.06 |
| TraesCS5B01G513000.1 | Wheat | extracellular, vacuole | 33.11 | 24.02 |
| KRG90471 | Soybean | vacuole | 48.65 | 23.68 |
| TraesCS5D01G513400.1 | Wheat | extracellular | 32.09 | 23.34 |
| KRH68400 | Soybean | extracellular | 42.23 | 23.23 |
| HORVU5Hr1G117440.1 | Barley | endoplasmic reticulum, golgi, mitochondrion, plastid | 32.43 | 23.13 |
| KRG96680 | Soybean | extracellular | 41.22 | 23.06 |
| VIT_14s0060g00440.t01 | Wine grape | vacuole | 46.28 | 22.28 |
| CDX99038 | Canola | extracellular | 17.57 | 22.13 |
| Zm00001d034729_P002 | Maize | endoplasmic reticulum, vacuole | 34.46 | 20.77 |
| Os03t0833600-01 | Rice | plasma membrane | 38.18 | 19.69 |
| EER90586 | Sorghum | extracellular | 37.16 | 17.89 |
| GSMUA_Achr11P... | Banana | extracellular, plastid, vacuole | 31.76 | 17.84 |
| GSMUA_Achr2P02010_001 | Banana | cytosol | 28.04 | 17.7 |
| Zm00001d012917_P001 | Maize | plasma membrane | 36.15 | 17.46 |
| CDY56795 | Canola | cytosol, nucleus, plastid, vacuole | 18.24 | 17.25 |
| CDX87377 | Canola | endoplasmic reticulum, extracellular, vacuole | 20.27 | 15.58 |
| CDX88545 | Canola | endoplasmic reticulum, extracellular, vacuole | 20.27 | 15.42 |
| CDY37850 | Canola | vacuole | 19.59 | 15.26 |
| CDY43577 | Canola | vacuole | 19.26 | 14.92 |
| CDY47016 | Canola | extracellular | 16.89 | 13.44 |
Protein Annotations
| EnsemblPlants:CDX94970 | EnsemblPlantsGene:GSBRNA2T00100460001 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF118 | PFAM:PF07983 |
| ProteinID:CDX94970 | ProteinID:CDX94970.1 | SEG:seg | SignalP:SignalP-noTM | SMART:SM00768 | UniParc:UPI0004EE6095 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC05g07010D
Coordinates
chrLK031886:-:491826..492946
Molecular Weight (calculated)
30447.6 Da
IEP (calculated)
6.198
GRAVY (calculated)
-0.058
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQQSYFFLF LSLVSLSSSS TTTHDVLNPP MVFPTNPTTT PPVTTFPPVT ITPTNPATTV PLTPPVTTVP ATLTPPVTNP VTQYPPTQPS GTVPVIPSNS
101: PSVSGQSWCV AKPGASQTSL QLALDYACGL GGADCSQIQQ GGNCYSPISL QNHASFAFNS YYQKNPSPQS CDFGGAASLV STNPSTGSCI YQTGSSTSTS
201: TPTPSTQTVN QPPVTSTPII PTGGGIIGVG TPPAVFNPAN PSSNTLNYPL SGGPAVYGFD GSPSGNNPTL SDSTNLQLHF GHTMVVTLFL HAVLFH
101: PSVSGQSWCV AKPGASQTSL QLALDYACGL GGADCSQIQQ GGNCYSPISL QNHASFAFNS YYQKNPSPQS CDFGGAASLV STNPSTGSCI YQTGSSTSTS
201: TPTPSTQTVN QPPVTSTPII PTGGGIIGVG TPPAVFNPAN PSSNTLNYPL SGGPAVYGFD GSPSGNNPTL SDSTNLQLHF GHTMVVTLFL HAVLFH
001: MAKQSYFFVF TFLFLSLLSY CSSTTTHHDV LNPPTVFPTN PTTTPTATFP PVTITPTNPA TTVPIVPPVT TIPPPTLTPP PVITIPPPTL TPPVTNPVTN
101: PVTQYPPTQP SGTVPVPVPV VAPPVVSNSP SVSGQSWCVA KPGASQVSLQ QALDYACGIA DCSQLQQGGN CYSPISLQSH ASFAFNSYYQ KNPSPQSCDF
201: GGAASLVNTN PSTGSCIYQT GSSTSTPMTA GTTTPTPSTQ TVNQPPVTST PIIPTGGGII GVGTPPAIFN PANPTSNTLN NPSSGGLAGG YGFDGSPNEN
301: NPTSSDSTHL KIHFGHAMVA TLILHAVLFH
101: PVTQYPPTQP SGTVPVPVPV VAPPVVSNSP SVSGQSWCVA KPGASQVSLQ QALDYACGIA DCSQLQQGGN CYSPISLQSH ASFAFNSYYQ KNPSPQSCDF
201: GGAASLVNTN PSTGSCIYQT GSSTSTPMTA GTTTPTPSTQ TVNQPPVTST PIIPTGGGII GVGTPPAIFN PANPTSNTLN NPSSGGLAGG YGFDGSPNEN
301: NPTSSDSTHL KIHFGHAMVA TLILHAVLFH
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I0Z2]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.