CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034729_P002	Maize	endoplasmic reticulum, vacuole	66.83	83.71
Zm00001d012917_P001	Maize	plasma membrane	78.86	79.12
Os03t0833600-01	Rice	plasma membrane	58.05	62.2
TraesCS5D01G513400.1	Wheat	extracellular	37.72	57.0
TraesCS5B01G513000.1	Wheat	extracellular, vacuole	37.72	56.86
TraesCS4A01G358500.1	Wheat	extracellular	37.72	56.59
HORVU5Hr1G117440.1	Barley	endoplasmic reticulum, golgi, mitochondrion, plastid	35.94	53.25
KXG27714	Sorghum	vacuole	24.23	43.19
PGSC0003DMT400047134	Potato	extracellular, golgi, vacuole	22.11	37.57
CDY64750	Canola	endoplasmic reticulum, vacuole	18.37	37.54
CDX94970	Canola	plastid	17.89	37.16
Bra020023.1-P	Field mustard	endoplasmic reticulum, vacuole	17.72	36.95
Solyc01g101120.2.1	Tomato	endoplasmic reticulum, golgi	21.79	36.51
Bra030780.1-P	Field mustard	endoplasmic reticulum, extracellular	18.21	36.48
OQU88437	Sorghum	extracellular	10.08	35.23
AT1G09460.1	Thale cress	extracellular, vacuole	18.7	34.85
OQU76517	Sorghum	extracellular	9.59	33.91
EER90180	Sorghum	extracellular, plasma membrane	12.2	33.63
OQU87600	Sorghum	extracellular	9.92	32.45
CDY31085	Canola	plastid	18.21	31.91
VIT_14s0060g00440.t01	Wine grape	vacuole	31.87	31.87
CDY32184	Canola	vacuole	18.05	31.44
EES05109	Sorghum	extracellular, plasma membrane	9.76	31.25
KRG96680	Soybean	extracellular	26.67	31.0
EES20007	Sorghum	extracellular, vacuole	12.36	30.77
KRH68400	Soybean	extracellular	26.67	30.48
KRG90471	Soybean	vacuole	29.27	29.61
KRH33760	Soybean	vacuole	29.11	29.3
EER97492	Sorghum	extracellular	9.11	28.87
EER92116	Sorghum	endoplasmic reticulum, extracellular, vacuole	8.94	27.92
EES01128	Sorghum	extracellular	12.2	24.19
GSMUA_Achr2P02010_001	Banana	cytosol	18.37	24.09
GSMUA_Achr11P...	Banana	extracellular, plastid, vacuole	20.0	23.34
EES18492	Sorghum	extracellular	8.46	22.71
KXG37528	Sorghum	mitochondrion	8.94	20.75
KXG27096	Sorghum	extracellular, vacuole	12.85	18.54
KXG36188	Sorghum	cytosol, endoplasmic reticulum, vacuole	14.15	16.05

Protein Annotations

MapMan:35.1	EntrezGene:8080208	UniProt:C5WU19	EnsemblPlants:EER90586	ProteinID:EER90586	ProteinID:EER90586.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0030246	GO:GO:0030247
GO:GO:0046658	PFAM:PF07983	PANTHER:PTHR32227	PANTHER:PTHR32227:SF118	SMART:SM00768	EnsemblPlantsGene:SORBI_3001G026700
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A81F13	InterPro:X8	RefSeq:XP_002463588.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:2082677..2085528

Molecular Weight (calculated)

63193.5 Da

IEP (calculated)

7.519

GRAVY (calculated)

0.015

Length

615 amino acids

Sequence
(BLAST)

001: MAAASPLALT FFFCCILLLQ TICCSGVFVE LSYDSTQVKT LSSSVVTEYR VMVTAKQHAY LFLKPFVCRE KPCRSEPLAA GGSFVNEVLG PNRRLNVSNI
101: VVTATDTQLG ALRRTLQSFH ASLGAAGLAA SVKVSPELSL SSLRVVAKDR DRARKKRWGK VMEFVRRTGS FVLVQVETEA EANGEVAVDA EIEEAVAEVA
201: ALLRAGAGVV LHVKSRAAPI AVAMAKLGGD TSREKRLLGV LVDVSSPRRE LGEARATAHD EFSPVSNPAT TPVSNPVTVP ATNPVANPMA PGFVTVPSTN
301: PGNGFATNPN MPPLYPEPTT PATMPMPDPT TPTMPPVTVP SPFTNPVSAP TTMPGTVTNP AAPAVTNPAT TPSQFPGTSP VTNPVTTYPQ QGGVGVGGGM
401: PATQPVYQPP ATTMPGTGTV QPGAPTMAGQ AWCVAKSGLM DTTLQDAMDY ACGMGGADCS AIQPMGACYN PNTLQAHASY AFNSYFQRNP SAASCDFGGA
501: GMLVNVNPSS GTCMYQTSSG FGAGYSPGTT GGGVPGGYTP GMSGTGYNPA GGMSGTMGGG SGSTVLNANN PGGSMYGGYD NPTGLTAGSA PVSCGGWVVL
601: CLVWMVTFAF VKERV

Best Arabidopsis Sequence Match ( AT1G09460.1 )
(BLAST)

001: MAKQSYFFVF TFLFLSLLSY CSSTTTHHDV LNPPTVFPTN PTTTPTATFP PVTITPTNPA TTVPIVPPVT TIPPPTLTPP PVITIPPPTL TPPVTNPVTN
101: PVTQYPPTQP SGTVPVPVPV VAPPVVSNSP SVSGQSWCVA KPGASQVSLQ QALDYACGIA DCSQLQQGGN CYSPISLQSH ASFAFNSYYQ KNPSPQSCDF
201: GGAASLVNTN PSTGSCIYQT GSSTSTPMTA GTTTPTPSTQ TVNQPPVTST PIIPTGGGII GVGTPPAIFN PANPTSNTLN NPSSGGLAGG YGFDGSPNEN
301: NPTSSDSTHL KIHFGHAMVA TLILHAVLFH

Arabidopsis Description

Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I0Z2]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.