Factsheet for PGSC0003DMT400047134

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g101120.2.1	Tomato	endoplasmic reticulum, golgi	96.96	95.64
PGSC0003DMT400059279	Potato	cytosol	14.92	45.38
PGSC0003DMT400015724	Potato	extracellular	13.26	42.11
CDY64750	Canola	endoplasmic reticulum, vacuole	33.98	40.86
CDX94970	Canola	plastid	33.15	40.54
Bra020023.1-P	Field mustard	endoplasmic reticulum, vacuole	32.87	40.34
Bra030780.1-P	Field mustard	endoplasmic reticulum, extracellular	33.7	39.74
AT1G09460.1	Thale cress	extracellular, vacuole	35.91	39.39
PGSC0003DMT400044716	Potato	extracellular	25.14	37.3
TraesCS4D01G132800.1	Wheat	extracellular, plasma membrane, vacuole	33.98	37.27
TraesCS4B01G138000.1	Wheat	extracellular, plasma membrane, vacuole	33.7	36.97
PGSC0003DMT400045877	Potato	extracellular	10.77	36.45
TraesCS4A01G178000.1	Wheat	extracellular, plasma membrane, vacuole	32.87	36.06
CDY32184	Canola	vacuole	33.98	34.84
KXG27714	Sorghum	vacuole	33.15	34.78
CDY31085	Canola	plastid	33.7	34.76
Zm00001d004933_P001	Maize	endoplasmic reticulum, extracellular, vacuole	31.77	33.72
PGSC0003DMT400034582	Potato	extracellular	10.77	33.62
VIT_14s0060g00440.t01	Wine grape	vacuole	51.38	30.24
TraesCS5B01G513000.1	Wheat	extracellular, vacuole	33.43	29.66
TraesCS4A01G358500.1	Wheat	extracellular	33.43	29.51
TraesCS5D01G513400.1	Wheat	extracellular	33.15	29.48
PGSC0003DMT400003054	Potato	extracellular	15.47	29.32
PGSC0003DMT400072939	Potato	extracellular	16.57	29.13
PGSC0003DMT400080365	Potato	endoplasmic reticulum, extracellular	16.3	28.92
HORVU5Hr1G117440.1	Barley	endoplasmic reticulum, golgi, mitochondrion, plastid	33.15	28.92
KRH68400	Soybean	extracellular	42.82	28.81
KRH33760	Soybean	vacuole	47.79	28.31
KRG90471	Soybean	vacuole	47.51	28.29
KRG96680	Soybean	extracellular	41.16	28.17
PGSC0003DMT400063348	Potato	extracellular	14.09	27.57
PGSC0003DMT400011608	Potato	mitochondrion	14.09	27.13
Zm00001d034729_P002	Maize	endoplasmic reticulum, vacuole	36.74	27.09
PGSC0003DMT400025000	Potato	nucleus	18.78	24.46
Os03t0833600-01	Rice	plasma membrane	36.46	23.0
EER90586	Sorghum	extracellular	37.57	22.11
Zm00001d012917_P001	Maize	plasma membrane	36.46	21.53
GSMUA_Achr11P...	Banana	extracellular, plastid, vacuole	29.01	19.92
GSMUA_Achr2P02010_001	Banana	cytosol	24.59	18.98
PGSC0003DMT400024290	Potato	extracellular, vacuole	16.02	16.76
PGSC0003DMT400038538	Potato	plasma membrane, vacuole	18.23	16.71

Protein Annotations

EMBL:JX838879	EnsemblPlants:PGSC0003DMT400047134	EnsemblPlantsGene:PGSC0003DMG400018289	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF122
PFAM:PF07983	PFscan:PS51257	PGSC:PGSC0003DMG400018289	PRINTS:PR01217	ProteinID:AFU52660	ProteinID:AFU52660.1
SEG:seg	SignalP:SignalP-noTM	SMART:SM00768	TMHMM:TMhelix	UniParc:UPI0002961A67	UniProt:M1BK59
MapMan:35.1	:	:	:	:	:

Description

Hydrolase, hydrolyzing O-glycosyl compounds [Source:PGSC_GENE;Acc:PGSC0003DMG400018289]

Coordinates

chr1:+:78780928..78783416

Molecular Weight (calculated)

36863.6 Da

IEP (calculated)

5.983

GRAVY (calculated)

-0.081

Length

362 amino acids

Sequence
(BLAST)

001: MTRGASKFIF LFFLFILLAC ISGLSPAKRI EHRELEREKE QKHHMFGKGL LELLPIRAIK HDLMDPPATT GFPTTPIVNP VTTPSNMPPD NSAPTVVTVP
101: STNPNLGIPN FGSIPPAAPS TTPVTDPNPN PPVPLTNPVT TPSTSTPVSN PVTTNPNPVG GVPATTPVTP PATTNAPATG GQSWCVAKNG AGETSLQSAL
201: DYACGMGADC SAIQQGGSCY NPNSLPGHAS YAFNSYFQKN PAQTSCDFGG AAMITNSNPS TGSCVFPASG SSLSSPATTT TPMSGTPAPT TSSSTGAAIP
301: GLAPPTVTNG NDSGFGTMPS GIGDSIPPTT TTSLSMSNEL QPLVGCIVLV ASLATSKLVL EF

Best Arabidopsis Sequence Match ( AT1G09460.1 )
(BLAST)

001: MAKQSYFFVF TFLFLSLLSY CSSTTTHHDV LNPPTVFPTN PTTTPTATFP PVTITPTNPA TTVPIVPPVT TIPPPTLTPP PVITIPPPTL TPPVTNPVTN
101: PVTQYPPTQP SGTVPVPVPV VAPPVVSNSP SVSGQSWCVA KPGASQVSLQ QALDYACGIA DCSQLQQGGN CYSPISLQSH ASFAFNSYYQ KNPSPQSCDF
201: GGAASLVNTN PSTGSCIYQT GSSTSTPMTA GTTTPTPSTQ TVNQPPVTST PIIPTGGGII GVGTPPAIFN PANPTSNTLN NPSSGGLAGG YGFDGSPNEN
301: NPTSSDSTHL KIHFGHAMVA TLILHAVLFH

Arabidopsis Description

Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I0Z2]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.