CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020023.1-P	Field mustard	endoplasmic reticulum, vacuole	96.35	98.31
CDX94970	Canola	plastid	94.68	96.28
AT1G09460.1	Thale cress	extracellular, vacuole	87.04	79.39
CDY31085	Canola	plastid	86.71	74.36
CDY32184	Canola	vacuole	85.71	73.09
CDY56715	Canola	cytosol	16.28	43.36
CDY47296	Canola	extracellular	14.95	37.82
CDX74636	Canola	extracellular	14.95	37.82
CDX90730	Canola	endoplasmic reticulum, extracellular	15.28	36.8
CDY48582	Canola	cytosol	17.28	36.62
CDY21992	Canola	cytosol	17.28	36.62
CDY72034	Canola	endoplasmic reticulum, extracellular	14.62	36.36
CDY05067	Canola	endoplasmic reticulum, extracellular	14.95	36.29
CDX97778	Canola	extracellular	26.58	34.93
CDY29629	Canola	extracellular	26.58	34.93
PGSC0003DMT400047134	Potato	extracellular, golgi, vacuole	40.86	33.98
Solyc01g101120.2.1	Tomato	endoplasmic reticulum, golgi	41.2	33.79
TraesCS4A01G178000.1	Wheat	extracellular, plasma membrane, vacuole	36.21	33.03
TraesCS4B01G138000.1	Wheat	extracellular, plasma membrane, vacuole	35.88	32.73
TraesCS4D01G132800.1	Wheat	extracellular, plasma membrane, vacuole	35.55	32.42
KXG27714	Sorghum	vacuole	34.22	29.86
CDY43335	Canola	extracellular	29.24	29.83
Zm00001d004933_P001	Maize	endoplasmic reticulum, extracellular, vacuole	33.55	29.62
CDY26741	Canola	extracellular	18.27	29.57
CDX98264	Canola	endoplasmic reticulum, extracellular, plasma membrane	16.61	29.41
CDY54140	Canola	extracellular	20.27	29.19
CDY01142	Canola	extracellular	18.27	29.1
CDY40247	Canola	endoplasmic reticulum, extracellular, vacuole	18.94	29.08
CDY23085	Canola	extracellular, plasma membrane, vacuole	18.6	29.02
CDY47357	Canola	endoplasmic reticulum, extracellular	17.94	28.88
CDX99818	Canola	extracellular	28.24	28.81
CDX83826	Canola	extracellular	17.61	28.8
CDY19232	Canola	extracellular	17.94	28.72
CDX96707	Canola	extracellular	17.61	28.65
CDY50312	Canola	extracellular	20.27	28.37
CDY48334	Canola	vacuole	29.57	28.34
CDY65205	Canola	plasma membrane	18.6	28.28
CDX87201	Canola	extracellular	18.6	28.14
CDX90189	Canola	extracellular	29.24	28.03
CDY07353	Canola	extracellular	20.27	27.98
CDY56240	Canola	extracellular	15.95	27.75
CDY16115	Canola	extracellular	14.29	27.74
CDY16822	Canola	extracellular	18.27	27.64
CDY04273	Canola	extracellular	19.93	27.52
CDY02169	Canola	extracellular	17.61	27.32
CDX79873	Canola	endoplasmic reticulum, extracellular, plasma membrane	15.95	26.82
CDY40909	Canola	endoplasmic reticulum, extracellular, plasma membrane	20.93	26.58
CDY65418	Canola	cytosol	12.96	26.53
CDY33795	Canola	extracellular	15.61	26.26
CDY16114	Canola	extracellular	15.28	25.7
CDY42854	Canola	extracellular	16.61	25.64
CDY34558	Canola	extracellular	14.62	25.58
CDY70929	Canola	extracellular	15.28	25.56
CDY51213	Canola	extracellular	13.62	25.47
CDY02987	Canola	extracellular	13.62	25.47
TraesCS4A01G358500.1	Wheat	extracellular	34.22	25.12
TraesCS5B01G513000.1	Wheat	extracellular, vacuole	33.55	24.75
CDY36415	Canola	extracellular	15.95	24.49
CDX96880	Canola	extracellular	13.95	24.42
KRH33760	Soybean	vacuole	49.5	24.39
KRH68400	Soybean	extracellular	43.19	24.16
CDX98134	Canola	extracellular	15.28	24.08
CDX69983	Canola	extracellular	16.94	24.06
KRG90471	Soybean	vacuole	48.51	24.01
TraesCS5D01G513400.1	Wheat	extracellular	32.23	23.83
KRG96680	Soybean	extracellular	41.86	23.82
HORVU5Hr1G117440.1	Barley	endoplasmic reticulum, golgi, mitochondrion, plastid	32.56	23.61
VIT_14s0060g00440.t01	Wine grape	vacuole	46.18	22.6
CDX99038	Canola	extracellular	17.28	22.13
Zm00001d034729_P002	Maize	endoplasmic reticulum, vacuole	34.55	21.18
Os03t0833600-01	Rice	plasma membrane	37.87	19.86
GSMUA_Achr11P...	Banana	extracellular, plastid, vacuole	32.56	18.6
GSMUA_Achr2P02010_001	Banana	cytosol	28.9	18.55
EER90586	Sorghum	extracellular	37.54	18.37
Zm00001d012917_P001	Maize	plasma membrane	36.54	17.94
CDY56795	Canola	cytosol, nucleus, plastid, vacuole	18.6	17.89
CDX87377	Canola	endoplasmic reticulum, extracellular, vacuole	20.6	16.1
CDX88545	Canola	endoplasmic reticulum, extracellular, vacuole	20.6	15.94
CDY37850	Canola	vacuole	19.93	15.79
CDY43577	Canola	vacuole	19.6	15.45
CDY47016	Canola	extracellular	16.94	13.71

Protein Annotations

EnsemblPlants:CDY64750	EnsemblPlantsGene:GSBRNA2T00042669001	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF118	PFAM:PF07983
PRINTS:PR01217	ProteinID:CDY64750	ProteinID:CDY64750.1	SEG:seg	SignalP:SignalP-noTM	SMART:SM00768
UniParc:UPI0004EF1CA5	UniProt:A0A078JE67	MapMan:35.1	:	:	:

Description

BnaA06g37900DBnaA06g37900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JE67]

Coordinates

chrLK034541:-:18574..19868

Molecular Weight (calculated)

31015.4 Da

IEP (calculated)

6.200

GRAVY (calculated)

-0.084

Length

301 amino acids

Sequence
(BLAST)

001: MAKQSYFFLF LSLVSLSSST TTTHDVLNPP TVFPTNPTTT PPVTTFPPVT ITPTNPTTTV PLTPPVTTVP ATLTPPVTNP VTQYPPTQPS GMVPVPVIPP
101: PVTSNSPSVS GQSWCVAKPG ASQTSLQLAL DYACGLGGAD CSQIQQGGNC YSPISLQNHA SFAFNSYYQK NPSPQSCDFG GAASLVSTNP STGSCIYQTD
201: SSTSTTPTPS TQTVNQPPVT STPIIPTGGG IMGVGTPPAV FNPANPSSNT LNNPLSGGPA VYGFDGSPNG NNPTLSDSTN LQLHFGHTMV VTLILHAVLF
301: H

Best Arabidopsis Sequence Match ( AT1G09460.1 )
(BLAST)

001: MAKQSYFFVF TFLFLSLLSY CSSTTTHHDV LNPPTVFPTN PTTTPTATFP PVTITPTNPA TTVPIVPPVT TIPPPTLTPP PVITIPPPTL TPPVTNPVTN
101: PVTQYPPTQP SGTVPVPVPV VAPPVVSNSP SVSGQSWCVA KPGASQVSLQ QALDYACGIA DCSQLQQGGN CYSPISLQSH ASFAFNSYYQ KNPSPQSCDF
201: GGAASLVNTN PSTGSCIYQT GSSTSTPMTA GTTTPTPSTQ TVNQPPVTST PIIPTGGGII GVGTPPAIFN PANPTSNTLN NPSSGGLAGG YGFDGSPNEN
301: NPTSSDSTHL KIHFGHAMVA TLILHAVLFH

Arabidopsis Description

Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I0Z2]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.