CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

nucleus 1
plastid 1
vacuole 6
extracellular 3
endoplasmic reticulum 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031835.1-P	Field mustard	vacuole	91.36	92.08
CDY37850	Canola	vacuole	91.1	91.58
AT5G67460.1	Thale cress	vacuole	75.92	76.32
KRH77114	Soybean	extracellular, vacuole	45.03	43.54
KRH28365	Soybean	vacuole	45.29	43.47
VIT_07s0129g00230.t01	Wine grape	vacuole	44.5	41.16
PGSC0003DMT400038538	Potato	plasma membrane, vacuole	40.05	38.73
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane, vacuole	35.86	38.7
CDY47296	Canola	extracellular	11.52	36.97
CDX74636	Canola	extracellular	11.52	36.97
CDY56715	Canola	cytosol	10.73	36.28
Os10t0347000-01	Rice	endoplasmic reticulum, extracellular, vacuole	31.15	34.59
CDY05067	Canola	endoplasmic reticulum, extracellular	10.21	31.45
CDY72034	Canola	endoplasmic reticulum, extracellular	9.95	31.41
CDY48582	Canola	cytosol	11.52	30.99
CDY21992	Canola	cytosol	11.52	30.99
CDX90730	Canola	endoplasmic reticulum, extracellular	9.95	30.4
VIT_09s0002g06500.t01	Wine grape	cytosol, peroxisome, plastid	26.96	27.91
CDY56795	Canola	cytosol, nucleus, plastid, vacuole	20.94	25.56
CDX97778	Canola	extracellular	14.92	24.89
CDY29629	Canola	extracellular	14.92	24.89
CDY01142	Canola	extracellular	12.3	24.87
CDY47357	Canola	endoplasmic reticulum, extracellular	12.04	24.6
CDY16115	Canola	extracellular	9.69	23.87
CDX83826	Canola	extracellular	11.26	23.37
CDX96707	Canola	extracellular	11.26	23.24
CDY26741	Canola	extracellular	11.26	23.12
CDY02987	Canola	extracellular	9.69	22.98
CDY51213	Canola	extracellular	9.69	22.98
CDY33795	Canola	extracellular	10.73	22.91
CDY19232	Canola	extracellular	11.26	22.87
CDY43335	Canola	extracellular	17.28	22.37
CDY16114	Canola	extracellular	10.47	22.35
CDX69983	Canola	extracellular	12.3	22.17
CDY16822	Canola	extracellular	11.52	22.11
CDX87201	Canola	extracellular	11.52	22.11
CDX96880	Canola	extracellular	9.95	22.09
CDY02169	Canola	extracellular	10.99	21.65
CDY34558	Canola	extracellular	9.69	21.51
CDX98264	Canola	endoplasmic reticulum, extracellular, plasma membrane	9.42	21.18
CDY42854	Canola	extracellular	10.73	21.03
CDX90189	Canola	extracellular	17.28	21.02
CDX99818	Canola	extracellular	16.23	21.02
CDY56240	Canola	extracellular	9.42	20.81
CDY23085	Canola	extracellular, plasma membrane, vacuole	10.47	20.73
CDX79873	Canola	endoplasmic reticulum, extracellular, plasma membrane	9.69	20.67
CDX88545	Canola	endoplasmic reticulum, extracellular, vacuole	20.94	20.57
CDX87377	Canola	endoplasmic reticulum, extracellular, vacuole	20.68	20.52
CDX99038	Canola	extracellular	12.57	20.43
CDY48334	Canola	vacuole	16.75	20.38
CDY65418	Canola	cytosol	7.59	19.73
CDY64750	Canola	endoplasmic reticulum, vacuole	15.45	19.6
CDY70929	Canola	extracellular	9.16	19.44
CDY40247	Canola	endoplasmic reticulum, extracellular, vacuole	9.95	19.39
CDX94970	Canola	plastid	14.92	19.26
CDY65205	Canola	plasma membrane	9.95	19.19
CDX98134	Canola	extracellular	9.42	18.85
CDY54140	Canola	extracellular	10.21	18.66
CDY50312	Canola	extracellular	10.21	18.14
CDY04273	Canola	extracellular	10.21	17.89
CDY36415	Canola	extracellular	9.16	17.86
CDY07353	Canola	extracellular	9.95	17.43
CDY40909	Canola	endoplasmic reticulum, extracellular, plasma membrane	10.21	16.46
CDY31085	Canola	plastid	14.4	15.67
CDY32184	Canola	vacuole	14.4	15.58
CDY47016	Canola	extracellular	10.73	11.02

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	MapMan:50.3.2	GO:A0A078I0F7	UniProt:A0A078I0F7	EnsemblPlants:CDY43577
ProteinID:CDY43577	ProteinID:CDY43577.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00076880001	InterPro:Glyco_hydro_17	PFAM:PF00332
PFAM:PF07983	PANTHER:PTHR32227	PANTHER:PTHR32227:SF98	SMART:SM00768	SignalP:SignalP-noTM	UniParc:UPI0004EE8F4F
InterPro:X8	SEG:seg	:	:	:	:

Description

BnaC02g16740DBnaC02g16740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I0F7]

Coordinates

chrLK032561:-:202740..204466

Molecular Weight (calculated)

42059.3 Da

IEP (calculated)

8.929

GRAVY (calculated)

-0.224

Length

382 amino acids

Sequence
(BLAST)

001: MRHLLYIFFF IPILGFAGAG QESTPIKALN LLQLLPQTTD LELAVSVRDN KTITEISSSI IKAETWLKTH VLSRYPSTKI TTIVIFSPDS CQTTQRKPTF
101: DLVLSSLKNL HHSLTRWGLE KNIKVSSGFS YQCLNNLEAF KPTLAFLRSI NSTFTINPPP NFLYSPDNHL DMLRSVEKFG SLSFNRVNFL NPDQEEAAVA
201: AMATRRNLRS LINFSRKFTL NFPTLPSPSP ENSPKSPISS PPEKSPITSP PEQSPISFPP EKSPIASPGL SLSPCIPHPT SSPPPAKEKG VEGLWCVAKP
301: SVAAETLQQS LDFACGQGGA NCDEIKPRGI CFYPDTTVAH ASYAFNSYWQ KTKRNGGSCS FGGTAMLITT DPSYQHCRFV LS

Best Arabidopsis Sequence Match ( AT5G67460.1 )
(BLAST)

001: MRHLLYIFLF IAFLSFAGAG QESTPIEALN LNNNLLQLPQ TTDLDLAVSV SGNKTITEIS SSIIKAETWL KTHILSRYPS TKITTIVIFF PDSCQTTQHS
101: SDLVLSSLKN IYHSLTRWGL ENNIKVSSGF SYQCLNNPKS SEMFKPVLIF LKTINSTFTI NPPQNFLTSP HNHRDLLHSV EKLGSLSFNK VNFLNPEPEQ
201: ESTTTMTRRN LRSLVNLSSK FTTSFPTLPS PSPETSPIHS SIGSPSPPTI PYFPEPSQSP MESNQGISLP PCLPYHPAPS PQPVKKKNVE GLWCVAKPSV
301: AAETLQQSLD FACGQGGANC DEIKPHGICY YPDTVMAHAS YAFNSYWQKT KRNGGTCSFG GTAMLITTDP SYQHCRFVLS

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9FJX7]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.