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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra035941.1-P Field mustard extracellular 97.49 97.49
CDY16822 Canola extracellular 97.49 97.49
CDY42854 Canola extracellular 85.43 87.18
CDY23085 Canola extracellular, plasma membrane, vacuole 83.42 86.01
CDY02169 Canola extracellular 83.42 85.57
AT5G61130.1 Thale cress extracellular 80.9 80.1
CDX69983 Canola extracellular 64.82 60.85
CDX99038 Canola extracellular 65.33 55.32
CDY26741 Canola extracellular 51.26 54.84
CDX83826 Canola extracellular 50.25 54.35
CDX96707 Canola extracellular 49.75 53.51
CDY19232 Canola extracellular 50.25 53.19
GSMUA_Achr4P23440_001 Banana cytosol 35.18 46.67
GSMUA_Achr7P26650_001 Banana extracellular 26.63 45.69
GSMUA_Achr9P07140_001 Banana extracellular 42.21 45.16
CDY16115 Canola extracellular 34.67 44.52
CDY16114 Canola extracellular 39.7 44.13
CDY33795 Canola extracellular 39.7 44.13
CDY47016 Canola extracellular 82.41 44.09
GSMUA_Achr4P32790_001 Banana endoplasmic reticulum, extracellular, plasma membrane 39.7 43.89
GSMUA_Achr1P04440_001 Banana endoplasmic reticulum, extracellular, vacuole 42.21 43.75
TraesCS5B01G399400.1 Wheat extracellular 34.67 43.67
CDY34558 Canola extracellular 37.19 43.02
TraesCS2D01G185800.1 Wheat endoplasmic reticulum, extracellular, vacuole 42.21 42.42
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 40.2 41.88
CDX96880 Canola extracellular 36.18 41.86
TraesCS2A01G177600.1 Wheat endoplasmic reticulum, extracellular, vacuole 41.71 41.5
Os07t0600700-01 Rice extracellular 39.7 40.72
GSMUA_Achr5P08900_001 Banana extracellular 38.69 40.53
TraesCS2B01G204700.1 Wheat endoplasmic reticulum, extracellular, vacuole 41.71 40.49
CDY02987 Canola extracellular 32.66 40.37
CDY51213 Canola extracellular 32.66 40.37
TraesCS5B01G398000.1 Wheat extracellular 33.17 40.24
TraesCS5A01G393200.1 Wheat extracellular 33.67 40.12
Os03t0756300-01 Rice extracellular 34.67 39.43
TraesCS5D01G403000.1 Wheat extracellular 32.66 39.16
CDY36415 Canola extracellular 38.19 38.78
CDY65418 Canola cytosol 28.64 38.78
CDX98134 Canola extracellular 37.19 38.74
Zm00001d043361_P001 Maize endoplasmic reticulum, extracellular 36.18 38.3
EER97492 Sorghum extracellular 37.19 38.14
GSMUA_Achr8P28170_001 Banana extracellular 29.65 38.06
Zm00001d006776_P001 Maize endoplasmic reticulum, extracellular, vacuole 37.69 37.69
Zm00001d006777_P003 Maize endoplasmic reticulum, extracellular, vacuole 37.69 37.69
TraesCS6D01G099100.1 Wheat endoplasmic reticulum, extracellular, vacuole 35.68 37.37
HORVU4Hr1G028360.1 Barley peroxisome, plastid 23.62 37.3
OQU87600 Sorghum extracellular 34.67 36.7
TraesCS6B01G138700.1 Wheat endoplasmic reticulum, extracellular, vacuole 36.18 36.36
Zm00001d022059_P001 Maize endoplasmic reticulum, extracellular 36.18 36.36
Os03t0421800-01 Rice endoplasmic reticulum, extracellular, vacuole 34.17 36.17
TraesCS6A01G110400.1 Wheat endoplasmic reticulum, extracellular, vacuole 35.18 35.53
TraesCS3A01G302400.1 Wheat extracellular 34.67 35.2
Os01t0763900-01 Rice extracellular 36.18 34.78
TraesCS3D01G299600.1 Wheat extracellular 34.17 34.69
CDY01142 Canola extracellular 32.16 33.86
EER92116 Sorghum endoplasmic reticulum, extracellular, vacuole 33.17 33.5
GSMUA_Achr4P10810_001 Banana endoplasmic reticulum, nucleus, plasma membrane 40.7 33.33
CDY40247 Canola endoplasmic reticulum, extracellular, vacuole 32.66 33.16
Zm00001d047293_P001 Maize endoplasmic reticulum, extracellular, vacuole 32.66 33.16
Zm00001d029539_P001 Maize endoplasmic reticulum, extracellular, vacuole 33.17 33.0
CDY65205 Canola plasma membrane 32.66 32.83
CDY47357 Canola endoplasmic reticulum, extracellular 30.65 32.62
CDX74636 Canola extracellular 19.1 31.93
CDY56715 Canola cytosol 18.09 31.86
HORVU1Hr1G077100.2 Barley endoplasmic reticulum, extracellular, vacuole 33.17 31.28
CDY47296 Canola extracellular 18.59 31.09
TraesCS1B01G346200.2 Wheat endoplasmic reticulum, extracellular, vacuole 32.16 30.62
Zm00001d010728_P005 Maize extracellular 33.67 30.59
Zm00001d013250_P003 Maize extracellular 34.17 30.36
CDY05067 Canola endoplasmic reticulum, extracellular 18.59 29.84
Os05t0512600-01 Rice extracellular 34.17 29.82
CDY72034 Canola endoplasmic reticulum, extracellular 18.09 29.75
TraesCS1D01G335200.1 Wheat endoplasmic reticulum, extracellular, vacuole 32.16 29.49
CDY04273 Canola extracellular 32.16 29.36
CDY07353 Canola extracellular 32.16 29.36
CDX90730 Canola endoplasmic reticulum, extracellular 18.09 28.8
TraesCS1A01G332500.1 Wheat extracellular 30.15 28.71
HORVU6Hr1G019780.4 Barley endoplasmic reticulum, extracellular 32.16 28.32
HORVU2Hr1G033470.1 Barley cytosol, plastid 42.21 28.28
CDY54140 Canola extracellular 29.65 28.23
EES18492 Sorghum extracellular 32.16 27.95
CDY21992 Canola cytosol 19.6 27.46
CDY48582 Canola cytosol 19.6 27.46
Zm00001d034062_P001 Maize cytosol, golgi, peroxisome 33.67 27.46
CDY50312 Canola extracellular 29.65 27.44
Zm00001d038682_P001 Maize extracellular 31.66 27.39
CDY40909 Canola endoplasmic reticulum, extracellular, plasma membrane 32.16 27.0
HORVU5Hr1G096090.6 Barley plastid 30.65 26.07
KXG37528 Sorghum mitochondrion 34.67 26.04
TraesCS5A01G548300.1 Wheat plasma membrane 25.63 26.02
TraesCS3B01G334200.1 Wheat golgi, nucleus, plasma membrane 35.18 25.45
CDX98264 Canola endoplasmic reticulum, extracellular, plasma membrane 21.61 25.29
CDX79873 Canola endoplasmic reticulum, extracellular, plasma membrane 22.61 25.14
CDY56240 Canola extracellular 21.11 24.28
HORVU3Hr1G074010.3 Barley cytosol, plastid 35.18 24.05
CDY70929 Canola extracellular 21.11 23.33
CDX97778 Canola extracellular 22.61 19.65
CDY29629 Canola extracellular 22.61 19.65
CDX94970 Canola plastid 28.14 18.92
CDY64750 Canola endoplasmic reticulum, vacuole 28.14 18.6
CDX99818 Canola extracellular 27.14 18.31
CDY43335 Canola extracellular 26.63 17.97
CDX90189 Canola extracellular 27.14 17.2
CDY48334 Canola vacuole 27.14 17.2
CDY31085 Canola plastid 28.14 15.95
CDY32184 Canola vacuole 28.14 15.86
CDY56795 Canola cytosol, nucleus, plastid, vacuole 19.6 12.46
CDY37850 Canola vacuole 22.11 11.58
CDY43577 Canola vacuole 22.11 11.52
CDX87377 Canola endoplasmic reticulum, extracellular, vacuole 20.6 10.65
CDX88545 Canola endoplasmic reticulum, extracellular, vacuole 20.6 10.54
Protein Annotations
EnsemblPlants:CDX87201EnsemblPlantsGene:GSBRNA2T00146128001InterPro:X8PANTHER:PTHR32227PANTHER:PTHR32227:SF237PFAM:PF07983
ProteinID:CDX87201ProteinID:CDX87201.1SEG:segSignalP:SignalP-noTMSMART:SM00768UniParc:UPI0004EE515B
MapMan:35.1:::::
Description
BnaC09g05160D
Coordinates
chrLK031849:-:1141530..1143468
Molecular Weight (calculated)
20280.6 Da
IEP (calculated)
7.636
GRAVY (calculated)
-0.141
Length
199 amino acids
Sequence
(BLAST)
001: MAALVLSLLL LAMAGHSSAS WCVCKTGISD SVLQNTLDYA CGNGADCNPT HPKAPCFNPD NVRSHCSYAV NSFFQKKGQA PGTCDFSGTA TPTNTDPSYS
101: GCTFPTSASG SGGSTTMTPG TTNPKGSSTT TTLPGGNNPY SGTSTNGGFG NNSTGATGTG INPDYSIESG AFALKNSSKL STRLLLISLS GFCYFLMML
Best Arabidopsis Sequence Match ( AT5G61130.1 )
(BLAST)
001: MAALVLSLLL LSLAGHSSAS WCVCKTGLSD TVLQATLDYA CGNGADCNPT KPKQSCFNPD NVRSHCNYAV NSFFQKKGQS PGSCNFDGTA TPTNSDPSYT
101: GCAFPTSASG SSGSTTVTPG TTNPKGSPTT TTLPGSGTNS PYSGNPTNGV FGGNSTGGTT GTGINPDYTT DSSAFALKNS SKLFICLLLI ASSGFCSFLM
201: L
Arabidopsis Description
PDCB1PDCB1 [Source:UniProtKB/TrEMBL;Acc:A0A178URD1]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.