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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 5
  • vacuole 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX96707 Canola extracellular 98.37 97.84
AT1G18650.1 Thale cress extracellular 84.78 84.78
CDY26741 Canola extracellular 84.24 83.33
CDY19232 Canola extracellular 84.78 82.98
KRH54678 Soybean extracellular, nucleus 42.39 70.27
VIT_17s0000g07260.t01 Wine grape extracellular 59.78 53.14
CDY42854 Canola extracellular 54.35 51.28
CDY23085 Canola extracellular, plasma membrane, vacuole 52.72 50.26
CDX87201 Canola extracellular 54.35 50.25
CDY16822 Canola extracellular 54.35 50.25
CDY02169 Canola extracellular 52.72 50.0
KRH03122 Soybean extracellular, nucleus 53.8 48.77
PGSC0003DMT400063348 Potato extracellular 48.91 48.65
Solyc03g115200.2.1 Tomato extracellular 48.91 48.13
GSMUA_Achr4P23440_001 Banana cytosol 38.59 47.33
GSMUA_Achr9P07140_001 Banana extracellular 47.83 47.31
GSMUA_Achr4P32790_001 Banana endoplasmic reticulum, extracellular, plasma membrane 44.57 45.56
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 47.28 45.55
GSMUA_Achr1P04440_001 Banana endoplasmic reticulum, extracellular, vacuole 45.65 43.75
GSMUA_Achr5P08900_001 Banana extracellular 44.57 43.16
GSMUA_Achr7P26650_001 Banana extracellular 27.17 43.1
KRH56823 Soybean extracellular 49.46 42.72
GSMUA_Achr8P28170_001 Banana extracellular 35.87 42.58
CDX69983 Canola extracellular 48.37 41.98
Os07t0600700-01 Rice extracellular 42.93 40.72
TraesCS5B01G399400.1 Wheat extracellular 34.78 40.51
Os03t0421800-01 Rice endoplasmic reticulum, extracellular, vacuole 41.3 40.43
CDY51213 Canola extracellular 34.78 39.75
TraesCS5B01G398000.1 Wheat extracellular 35.33 39.63
CDY16115 Canola extracellular 33.15 39.35
EER97492 Sorghum extracellular 41.3 39.18
CDY16114 Canola extracellular 38.04 39.11
TraesCS2D01G185800.1 Wheat endoplasmic reticulum, extracellular, vacuole 41.85 38.89
CDY65418 Canola cytosol 30.98 38.78
CDY33795 Canola extracellular 37.5 38.55
CDY02987 Canola extracellular 33.7 38.51
TraesCS6B01G138700.1 Wheat endoplasmic reticulum, extracellular, vacuole 41.3 38.38
CDY34558 Canola extracellular 35.87 38.37
TraesCS6A01G110400.1 Wheat endoplasmic reticulum, extracellular, vacuole 40.76 38.07
TraesCS2A01G177600.1 Wheat endoplasmic reticulum, extracellular, vacuole 41.3 38.0
TraesCS5D01G403000.1 Wheat extracellular 34.24 37.95
TraesCS6D01G099100.1 Wheat endoplasmic reticulum, extracellular, vacuole 39.13 37.89
CDY40247 Canola endoplasmic reticulum, extracellular, vacuole 40.22 37.76
Os03t0756300-01 Rice extracellular 35.87 37.71
CDX99038 Canola extracellular 47.83 37.45
HORVU4Hr1G028360.1 Barley peroxisome, plastid 25.54 37.3
CDX96880 Canola extracellular 34.78 37.21
TraesCS5A01G393200.1 Wheat extracellular 33.7 37.13
TraesCS2B01G204700.1 Wheat endoplasmic reticulum, extracellular, vacuole 41.3 37.07
CDY65205 Canola plasma membrane 39.67 36.87
Zm00001d022059_P001 Maize endoplasmic reticulum, extracellular 39.13 36.36
CDX98134 Canola extracellular 37.5 36.13
CDY36415 Canola extracellular 38.04 35.71
Zm00001d006776_P001 Maize endoplasmic reticulum, extracellular, vacuole 38.59 35.68
Zm00001d006777_P003 Maize endoplasmic reticulum, extracellular, vacuole 38.59 35.68
Zm00001d043361_P001 Maize endoplasmic reticulum, extracellular 36.41 35.64
CDY56715 Canola cytosol 21.74 35.4
EER92116 Sorghum endoplasmic reticulum, extracellular, vacuole 37.5 35.03
Os01t0763900-01 Rice extracellular 39.13 34.78
TraesCS3A01G302400.1 Wheat extracellular 36.41 34.18
TraesCS3D01G299600.1 Wheat extracellular 36.41 34.18
OQU87600 Sorghum extracellular 34.78 34.04
CDY04273 Canola extracellular 40.22 33.95
CDY07353 Canola extracellular 40.22 33.95
CDX74636 Canola extracellular 21.74 33.61
CDY47296 Canola extracellular 21.74 33.61
CDY40909 Canola endoplasmic reticulum, extracellular, plasma membrane 42.93 33.33
Zm00001d047293_P001 Maize endoplasmic reticulum, extracellular, vacuole 35.33 33.16
CDY54140 Canola extracellular 37.5 33.01
CDY50312 Canola extracellular 37.5 32.09
CDY01142 Canola extracellular 32.61 31.75
GSMUA_Achr4P10810_001 Banana endoplasmic reticulum, nucleus, plasma membrane 41.85 31.69
CDY47357 Canola endoplasmic reticulum, extracellular 32.07 31.55
Zm00001d029539_P001 Maize endoplasmic reticulum, extracellular, vacuole 33.7 31.0
CDY21992 Canola cytosol 23.91 30.99
CDY48582 Canola cytosol 23.91 30.99
HORVU1Hr1G077100.2 Barley endoplasmic reticulum, extracellular, vacuole 35.33 30.81
Zm00001d013250_P003 Maize extracellular 37.5 30.8
TraesCS1A01G332500.1 Wheat extracellular 34.78 30.62
TraesCS1B01G346200.2 Wheat endoplasmic reticulum, extracellular, vacuole 34.24 30.14
Os05t0512600-01 Rice extracellular 36.96 29.82
TraesCS1D01G335200.1 Wheat endoplasmic reticulum, extracellular, vacuole 34.78 29.49
Zm00001d034062_P001 Maize cytosol, golgi, peroxisome 38.04 28.69
HORVU6Hr1G019780.4 Barley endoplasmic reticulum, extracellular 33.7 27.43
CDY05067 Canola endoplasmic reticulum, extracellular 18.48 27.42
CDX90730 Canola endoplasmic reticulum, extracellular 18.48 27.2
CDY47016 Canola extracellular 54.35 26.88
KXG37528 Sorghum mitochondrion 37.5 26.04
TraesCS5A01G548300.1 Wheat plasma membrane 27.72 26.02
HORVU2Hr1G033470.1 Barley cytosol, plastid 41.85 25.93
CDY72034 Canola endoplasmic reticulum, extracellular 16.85 25.62
EES18492 Sorghum extracellular 30.98 24.89
TraesCS3B01G334200.1 Wheat golgi, nucleus, plasma membrane 36.96 24.73
HORVU5Hr1G096090.6 Barley plastid 30.98 24.36
Zm00001d038682_P001 Maize extracellular 30.43 24.35
Zm00001d010728_P005 Maize extracellular 28.8 24.2
HORVU3Hr1G074010.3 Barley cytosol, plastid 36.96 23.37
CDX79873 Canola endoplasmic reticulum, extracellular, plasma membrane 22.28 22.91
CDX98264 Canola endoplasmic reticulum, extracellular, plasma membrane 20.65 22.35
CDX97778 Canola extracellular 27.72 22.27
CDY29629 Canola extracellular 27.72 22.27
CDY56240 Canola extracellular 20.65 21.97
CDY70929 Canola extracellular 21.2 21.67
CDX99818 Canola extracellular 30.98 19.32
CDY43335 Canola extracellular 30.43 18.98
CDY48334 Canola vacuole 30.98 18.15
CDX94970 Canola plastid 28.8 17.91
CDY64750 Canola endoplasmic reticulum, vacuole 28.8 17.61
CDX90189 Canola extracellular 29.89 17.52
CDY32184 Canola vacuole 29.89 15.58
CDY31085 Canola plastid 29.35 15.38
CDY56795 Canola cytosol, nucleus, plastid, vacuole 20.65 12.14
CDY37850 Canola vacuole 23.37 11.32
CDY43577 Canola vacuole 23.37 11.26
CDX87377 Canola endoplasmic reticulum, extracellular, vacuole 22.28 10.65
CDX88545 Canola endoplasmic reticulum, extracellular, vacuole 22.28 10.54
Protein Annotations
EnsemblPlants:CDX83826EnsemblPlantsGene:GSBRNA2T00139583001InterPro:X8PANTHER:PTHR32227PANTHER:PTHR32227:SF98PFAM:PF07983
ProteinID:CDX83826ProteinID:CDX83826.1SEG:segSignalP:SignalP-noTMSMART:SM00768UniParc:UPI0004EEC10B
MapMan:35.1:::::
Description
BnaC08g18190D
Coordinates
chrLK031834:+:669425..671225
Molecular Weight (calculated)
19296.9 Da
IEP (calculated)
7.977
GRAVY (calculated)
0.030
Length
184 amino acids
Sequence
(BLAST)
001: MAVVVLAVIL LAMVGHSSGT WCVCREGLSE AMLQKTLDYA CGAGADCGPI HQNGPCFNPN TVKSHCSYAV NSFFQKKRQS QGTCDFAGTA TVSASDPSYT
101: TCAFPASSSG SGTMTPVTTT PSTRVPTTTN TRPYTVTPST GGGLGIPAGG FNPDYTDPSY SFGSKLQNPR ATTLFLFMLF YLLI
Best Arabidopsis Sequence Match ( AT1G18650.1 )
(BLAST)
001: MAVFVLVMIL LAMAGHSSGT WCVCKEGLSE AMLQKTLDYA CGAGADCGPI HQTGPCFNPN TVKSHCSYAV NSFFQKKGQS LGTCDFAGTA TFSASDPSYT
101: TCPFPASASG SGTTTPVTTT PSTRVPTTTN TRPYTITPST GGGLGIPSGI NPDYTDPSFG FKLQSPRFGF IVLFTLFLPF YLFS
Arabidopsis Description
PDCB3PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ86]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.