CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, plastid, nucleus, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
plastid 2
mitochondrion 1
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid, vacuole
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008414.1-P	Field mustard	cytosol, nucleus, plastid, vacuole	97.44	94.43
CDX88545	Canola	endoplasmic reticulum, extracellular, vacuole	87.54	70.44
CDX87377	Canola	endoplasmic reticulum, extracellular, vacuole	85.94	69.87
KRH43685	Soybean	plastid	37.38	47.18
Solyc12g017360.1.1	Tomato	cytosol, peroxisome, plastid	44.41	47.12
PGSC0003DMT400025000	Potato	nucleus	41.21	46.4
Zm00001d042912_P001	Maize	nucleus	24.92	43.82
GSMUA_Achr6P00220_001	Banana	nucleus	41.85	43.23
HORVU2Hr1G099430.1	Barley	plastid	30.03	40.87
KRH13771	Soybean	vacuole	46.01	40.11
HORVU5Hr1G089770.2	Barley	plastid	23.64	38.34
VIT_19s0085g00810.t01	Wine grape	golgi, vacuole	44.09	37.5
CDY47296	Canola	extracellular	14.06	36.97
CDX74636	Canola	extracellular	13.74	36.13
Os06t0665200-00	Rice	cytosol	24.6	35.98
EER90180	Sorghum	extracellular, plasma membrane	25.56	35.87
Zm00001d002348_P001	Maize	endoplasmic reticulum, plasma membrane, plastid	35.46	33.84
CDY56715	Canola	cytosol	12.14	33.63
CDY72034	Canola	endoplasmic reticulum, extracellular	12.78	33.06
TraesCS7B01G384100.1	Wheat	extracellular	23.32	32.88
TraesCS7D01G468800.1	Wheat	extracellular	23.32	32.88
HORVU7Hr1G108980.1	Barley	extracellular	23.32	32.74
TraesCS7A01G481700.1	Wheat	extracellular	22.68	32.42
CDY05067	Canola	endoplasmic reticulum, extracellular	12.78	32.26
CDX90730	Canola	endoplasmic reticulum, extracellular	12.78	32.0
TraesCS2D01G423000.1	Wheat	extracellular, plasma membrane	33.87	29.78
TraesCS2B01G444800.1	Wheat	extracellular, plasma membrane	33.87	29.69
TraesCS2A01G425000.1	Wheat	plastid	34.19	29.64
CDY48582	Canola	cytosol	12.78	28.17
CDY21992	Canola	cytosol	12.78	28.17
KXG27096	Sorghum	extracellular, vacuole	36.1	26.53
TraesCS5D01G374100.1	Wheat	extracellular, vacuole	36.42	26.15
TraesCS5B01G366600.1	Wheat	plastid	34.5	25.47
CDY01142	Canola	extracellular	15.02	24.87
CDY47357	Canola	endoplasmic reticulum, extracellular	14.7	24.6
TraesCS5A01G365000.1	Wheat	extracellular	36.1	24.41
CDY16115	Canola	extracellular	11.82	23.87
KXG36188	Sorghum	cytosol, endoplasmic reticulum, vacuole	40.89	23.62
Os09t0560850-00	Rice	cytosol, endoplasmic reticulum, peroxisome	41.53	22.38
CDY29629	Canola	extracellular	16.29	22.27
CDX97778	Canola	extracellular	16.29	22.27
CDX96880	Canola	extracellular	12.14	22.09
CDY43335	Canola	extracellular	20.77	22.03
Zm00001d006343_P001	Maize	endoplasmic reticulum, plastid, vacuole	39.62	21.64
CDY37850	Canola	vacuole	26.2	21.58
CDY34558	Canola	extracellular	11.82	21.51
CDY43577	Canola	vacuole	25.56	20.94
CDY56240	Canola	extracellular	11.5	20.81
CDX90189	Canola	extracellular	20.77	20.7
CDY16114	Canola	extracellular	11.82	20.67
CDY33795	Canola	extracellular	11.82	20.67
CDX83826	Canola	extracellular	12.14	20.65
CDX98264	Canola	endoplasmic reticulum, extracellular, plasma membrane	11.18	20.59
CDX96707	Canola	extracellular	12.14	20.54
CDY51213	Canola	extracellular	10.54	20.5
CDY02987	Canola	extracellular	10.54	20.5
CDY26741	Canola	extracellular	12.14	20.43
CDY19232	Canola	extracellular	12.14	20.21
CDX69983	Canola	extracellular	13.42	19.81
CDY48334	Canola	vacuole	19.81	19.75
CDY65418	Canola	cytosol	9.27	19.73
CDX87201	Canola	extracellular	12.46	19.6
CDY16822	Canola	extracellular	12.46	19.6
CDY02169	Canola	extracellular	12.14	19.59
Zm00001d026281_P003	Maize	plastid	34.19	19.53
CDY42854	Canola	extracellular	12.14	19.49
CDY65205	Canola	plasma membrane	12.14	19.19
CDY23085	Canola	extracellular, plasma membrane, vacuole	11.82	19.17
CDX99818	Canola	extracellular	17.89	18.98
CDY40247	Canola	endoplasmic reticulum, extracellular, vacuole	11.82	18.88
CDX98134	Canola	extracellular	11.5	18.85
CDY04273	Canola	extracellular	13.1	18.81
CDY64750	Canola	endoplasmic reticulum, vacuole	17.89	18.6
CDX79873	Canola	endoplasmic reticulum, extracellular, plasma membrane	10.54	18.44
CDY07353	Canola	extracellular	12.78	18.35
CDX94970	Canola	plastid	17.25	18.24
CDY54140	Canola	extracellular	12.14	18.18
CDX99038	Canola	extracellular	13.42	17.87
CDY36415	Canola	extracellular	11.18	17.86
CDY70929	Canola	extracellular	10.22	17.78
CDY50312	Canola	extracellular	12.14	17.67
CDY40909	Canola	endoplasmic reticulum, extracellular, plasma membrane	12.46	16.46
CDY31085	Canola	plastid	17.89	15.95
CDY32184	Canola	vacuole	17.89	15.86
CDY47016	Canola	extracellular	12.14	10.22

Protein Annotations

EnsemblPlants:CDY56795	EnsemblPlantsGene:GSBRNA2T00020086001	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF237	PFAM:PF07983
PRINTS:PR01217	ProteinID:CDY56795	ProteinID:CDY56795.1	SEG:seg	SMART:SM00768	UniParc:UPI0004EE934E
UniProt:A0A078J3F1	MapMan:35.2	:	:	:	:

Description

BnaA02g36090DBnaA02g36090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J3F1]

Coordinates

chrLK033519:+:162..1261

Molecular Weight (calculated)

32408.4 Da

IEP (calculated)

3.995

GRAVY (calculated)

-0.504

Length

313 amino acids

Sequence
(BLAST)

001: MLEKMMTQLN LAQPLDYSTT SCNTQPNSVS ATLTLSPYVP LAPLSVPENA SPFCVNPPNT PLNSPPSSSY PELSPPPGPI NVPNPAESSS NPNSNPNTPD
101: STSNPNSIPN PPETSSSNPN PPVTVPNPPE SSSNPNPPES SLNPNPPVTV PNPPETVPSP SVPGYTPGPS GPISGPPYSE PGPSTPTDTP TPSGNIPTPS
201: SGFLPPIVYP PPMVPPPPSV TPTSAYWCVA KPSVPDPIIQ EAMNFACGSG ADCHSIQPNG ACFKPNTLWA HASYAFNSYW QRTKGSGGSC SFGGTGMLVT
301: VDPSFNGCHF DFF

Best Arabidopsis Sequence Match ( AT1G79480.1 )
(BLAST)

001: MESYRVFTTI CLLLCLFLSA NFFTHYVVDA RKSVGFEREP KKVMMIKALK HTSLLQKMMT QLNLAQPLDY SSSSNTQPYG VSTTLTLPPY VSLPPLSVPG
101: NAPPFCINPP NTPPSSSYPG LSPPPGPITL PNPPDSSSNP NSNPNPPESS SNPNPPDSSS NPNSNPNPPV TVPNPPESSS NPNPPDSSSN PNSNPNPPES
201: SSNPNPPVTV PNPPESSSNP NPPESSSNPN PPITIPYPPE SSSPNPPEIV PSPPESGYTP GPVLGPPYSE PGPSTPTGSI PSPSSGFLPP IVYPPPMAPP
301: SPSVTPTSAY WCVAKPSVPD PIIQEAMNFA CGSGADCHSI QPNGPCFKPN TLWAHASFAY NSYWQRTKST GGSCTFGGTG MLVTVDPSFN GCHFDFF

Arabidopsis Description

Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q5Q0D0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.