CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

plasma membrane: 26746009

msms PMID: 26746009 doi

S Chen, Y Luo, G Ding, F Xu

National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China., National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China. Electronic address: fangsenxu@mail.hzau.edu.cn., National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China; Key Laboratory of Agricultural Biotechnology of Liaoning Province, College of Biological Science and Technology, Shenyang Agricultural University, Shenyang 110866, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40247	Canola	endoplasmic reticulum, extracellular, vacuole	91.41	92.35
AT1G26450.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	69.7	70.05
CDY54140	Canola	extracellular	66.16	62.68
CDY50312	Canola	extracellular	67.68	62.33
CDY04273	Canola	extracellular	67.68	61.47
CDY07353	Canola	extracellular	67.68	61.47
CDY40909	Canola	endoplasmic reticulum, extracellular, plasma membrane	68.18	56.96
CDY26741	Canola	extracellular	37.88	40.32
CDX96707	Canola	extracellular	37.37	40.0
CDX83826	Canola	extracellular	36.87	39.67
CDY19232	Canola	extracellular	37.37	39.36
GSMUA_Achr4P23440_001	Banana	cytosol	29.8	39.33
Solyc05g012380.2.1	Tomato	extracellular	39.9	39.11
CDY16114	Canola	extracellular	34.34	37.99
CDY33795	Canola	extracellular	34.34	37.99
PGSC0003DMT400072939	Potato	extracellular	39.39	37.86
CDX74636	Canola	extracellular	22.73	37.82
GSMUA_Achr4P32790_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	33.84	37.22
GSMUA_Achr7P26650_001	Banana	extracellular	21.72	37.07
PGSC0003DMT400003054	Potato	extracellular	35.35	36.65
CDY47296	Canola	extracellular	21.72	36.13
CDY16115	Canola	extracellular	28.28	36.13
CDY65418	Canola	cytosol	26.77	36.05
CDY34558	Canola	extracellular	31.31	36.05
CDY02987	Canola	extracellular	29.29	36.02
CDY51213	Canola	extracellular	29.29	36.02
GSMUA_Achr9P07140_001	Banana	extracellular	33.84	36.02
Solyc01g010310.2.1	Tomato	extracellular	34.34	35.98
GSMUA_Achr1P04440_001	Banana	endoplasmic reticulum, extracellular, vacuole	34.85	35.94
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, vacuole	34.34	35.6
CDY42854	Canola	extracellular	34.85	35.38
EER97492	Sorghum	extracellular	34.34	35.05
GSMUA_Achr8P28170_001	Banana	extracellular	27.27	34.84
TraesCS5B01G398000.1	Wheat	extracellular	28.79	34.76
CDX96880	Canola	extracellular	29.8	34.3
TraesCS5B01G399400.1	Wheat	extracellular	26.77	33.54
TraesCS2D01G185800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	33.33	33.33
Os03t0756300-01	Rice	extracellular	29.29	33.14
TraesCS5D01G403000.1	Wheat	extracellular	27.78	33.13
TraesCS2A01G177600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	33.33	33.0
CDY02169	Canola	extracellular	32.32	32.99
TraesCS5A01G393200.1	Wheat	extracellular	27.78	32.93
Zm00001d022059_P001	Maize	endoplasmic reticulum, extracellular	32.83	32.83
CDX87201	Canola	extracellular	32.83	32.66
CDY16822	Canola	extracellular	32.83	32.66
CDY23085	Canola	extracellular, plasma membrane, vacuole	31.82	32.64
HORVU4Hr1G028360.1	Barley	peroxisome, plastid	20.71	32.54
TraesCS2B01G204700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	33.33	32.2
GSMUA_Achr5P08900_001	Banana	extracellular	30.81	32.11
TraesCS6D01G099100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	30.81	32.11
Os07t0600700-01	Rice	extracellular	31.31	31.96
Zm00001d006776_P001	Maize	endoplasmic reticulum, extracellular, vacuole	31.82	31.66
Zm00001d006777_P003	Maize	endoplasmic reticulum, extracellular, vacuole	31.82	31.66
TraesCS6B01G138700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	31.31	31.31
CDY36415	Canola	extracellular	30.81	31.12
CDX98134	Canola	extracellular	29.8	30.89
HORVU1Hr1G077100.2	Barley	endoplasmic reticulum, extracellular, vacuole	32.83	30.81
Zm00001d047293_P001	Maize	endoplasmic reticulum, extracellular, vacuole	29.8	30.1
EER92116	Sorghum	endoplasmic reticulum, extracellular, vacuole	29.8	29.95
CDY05067	Canola	endoplasmic reticulum, extracellular	18.69	29.84
TraesCS1A01G332500.1	Wheat	extracellular	31.31	29.67
TraesCS1B01G346200.2	Wheat	endoplasmic reticulum, extracellular, vacuole	31.31	29.67
TraesCS6A01G110400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	29.29	29.44
Os03t0421800-01	Rice	endoplasmic reticulum, extracellular, vacuole	27.78	29.26
TraesCS1D01G335200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	31.82	29.03
CDY72034	Canola	endoplasmic reticulum, extracellular	17.68	28.93
TraesCS3A01G302400.1	Wheat	extracellular	27.78	28.06
TraesCS3D01G299600.1	Wheat	extracellular	27.78	28.06
CDX90730	Canola	endoplasmic reticulum, extracellular	17.68	28.0
Zm00001d029539_P001	Maize	endoplasmic reticulum, extracellular, vacuole	28.28	28.0
CDX69983	Canola	extracellular	29.8	27.83
CDY01142	Canola	extracellular	25.76	26.98
Zm00001d010728_P005	Maize	extracellular	29.8	26.94
CDY47357	Canola	endoplasmic reticulum, extracellular	25.25	26.74
OQU87600	Sorghum	extracellular	25.25	26.6
Zm00001d043361_P001	Maize	endoplasmic reticulum, extracellular	25.25	26.6
CDY56715	Canola	cytosol	15.15	26.55
Zm00001d013250_P003	Maize	extracellular	29.8	26.34
GSMUA_Achr4P10810_001	Banana	endoplasmic reticulum, nucleus, plasma membrane	32.32	26.34
Os01t0763900-01	Rice	extracellular	27.27	26.09
EES18492	Sorghum	extracellular	29.8	25.76
HORVU6Hr1G019780.4	Barley	endoplasmic reticulum, extracellular	29.29	25.66
CDX99038	Canola	extracellular	30.3	25.53
Os05t0512600-01	Rice	extracellular	29.29	25.44
Zm00001d038682_P001	Maize	extracellular	28.79	24.78
Zm00001d034062_P001	Maize	cytosol, golgi, peroxisome	30.3	24.59
KXG37528	Sorghum	mitochondrion	31.82	23.77
CDX97778	Canola	extracellular	27.27	23.58
CDY29629	Canola	extracellular	27.27	23.58
CDY21992	Canola	cytosol	16.67	23.24
CDY48582	Canola	cytosol	16.67	23.24
HORVU2Hr1G033470.1	Barley	cytosol, plastid	34.85	23.23
TraesCS5A01G548300.1	Wheat	plasma membrane	21.21	21.43
HORVU5Hr1G096090.6	Barley	plastid	25.25	21.37
CDX79873	Canola	endoplasmic reticulum, extracellular, plasma membrane	19.19	21.23
CDY70929	Canola	extracellular	19.19	21.11
CDX98264	Canola	endoplasmic reticulum, extracellular, plasma membrane	17.68	20.59
TraesCS3B01G334200.1	Wheat	golgi, nucleus, plasma membrane	28.28	20.36
CDX99818	Canola	extracellular	28.79	19.32
CDX94970	Canola	plastid	28.79	19.26
CDY56240	Canola	extracellular	16.67	19.08
CDY43335	Canola	extracellular	28.28	18.98
HORVU3Hr1G074010.3	Barley	cytosol, plastid	27.78	18.9
CDY64750	Canola	endoplasmic reticulum, vacuole	28.28	18.6
CDY47016	Canola	extracellular	34.85	18.55
CDX90189	Canola	extracellular	28.79	18.15
CDY48334	Canola	vacuole	28.28	17.83
CDY32184	Canola	vacuole	29.8	16.71
CDY31085	Canola	plastid	28.79	16.24
CDY56795	Canola	cytosol, nucleus, plastid, vacuole	19.19	12.14
CDX87377	Canola	endoplasmic reticulum, extracellular, vacuole	21.21	10.91
CDX88545	Canola	endoplasmic reticulum, extracellular, vacuole	21.21	10.8
CDY37850	Canola	vacuole	19.19	10.0
CDY43577	Canola	vacuole	19.19	9.95

Protein Annotations

EnsemblPlants:CDY65205	EnsemblPlantsGene:GSBRNA2T00045385001	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF147	PFAM:PF07983
ProteinID:CDY65205	ProteinID:CDY65205.1	SEG:seg	SignalP:SignalP-noTM	SMART:SM00768	UniParc:UPI0004EC7551
UniProt:A0A078JFG7	MapMan:35.1	:	:	:	:

Description

BnaCnng46030DBnaCnng46030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JFG7]

Coordinates

chrLK034692:+:11780..13189

Molecular Weight (calculated)

19978.3 Da

IEP (calculated)

4.373

GRAVY (calculated)

0.058

Length

198 amino acids

Sequence
(BLAST)

001: MAILLSLFLI FSMVTYSNAA VCVCKDGDDQ ALQKVIDYAC GSGADCSQIE QNGPCFQPNT VKNHCDVAVN SFYQKKASTG ATCDFNGAAV VSTSPPSNAS
101: SCLSSSGSTS TPTTGTPSTG NLTTGSPSTR TPSTGNSTFG MPTNVNPTTG VPTSSVFPGT TMGPSGSTGF DPSCGDDLSV QTATVIVLTT IAVVALRV

Best Arabidopsis Sequence Match ( AT1G26450.1 )
(BLAST)

001: MAVLLPLFLL SFMFTYSNAA VCVCKDANEL DLQKVIDFAC GGGADCAQIQ TTGACYQPNT LKNHCDVAVN SYYQKKASTG ATCDFNGAAV ISTSPPSTTS
101: SCLSSSSSNG TPTAGYPSTG NSTTASPGTT NPSTGNSTNS TLPTNDKPTS STITFPDSTT MGPSSSTSGD PNGGEELSVR TTTIILLTTI AAVALRV

Arabidopsis Description

Carbohydrate-binding X8 domain-containing protein [Source:UniProtKB/Swiss-Prot;Acc:Q9FZD0]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.