Factsheet for TraesCS6D01G099100.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 5
golgi 4
plasma membrane 4
endoplasmic reticulum 5
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G110400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	96.32	92.89
TraesCS6B01G138700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	95.26	91.41
Os03t0421800-01	Rice	endoplasmic reticulum, extracellular, vacuole	68.95	69.68
EER92116	Sorghum	endoplasmic reticulum, extracellular, vacuole	66.32	63.96
Zm00001d047293_P001	Maize	endoplasmic reticulum, extracellular, vacuole	64.74	62.76
Zm00001d029539_P001	Maize	endoplasmic reticulum, extracellular, vacuole	64.21	61.0
TraesCS2D01G185800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	60.0	57.58
KRH54678	Soybean	extracellular, nucleus	27.89	47.75
GSMUA_Achr9P07140_001	Banana	extracellular	43.68	44.62
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, vacuole	43.16	42.93
GSMUA_Achr1P04440_001	Banana	endoplasmic reticulum, extracellular, vacuole	43.16	42.71
HORVU6Hr1G019780.4	Barley	endoplasmic reticulum, extracellular	49.47	41.59
GSMUA_Achr5P08900_001	Banana	extracellular	41.58	41.58
TraesCS3D01G299600.1	Wheat	extracellular	41.58	40.31
PGSC0003DMT400045877	Potato	extracellular	22.63	40.19
VIT_17s0000g07260.t01	Wine grape	extracellular	43.16	39.61
TraesCS1D01G335200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	44.74	39.17
CDX83826	Canola	extracellular	37.89	39.13
CDX96707	Canola	extracellular	37.89	38.92
GSMUA_Achr7P26650_001	Banana	extracellular	23.68	38.79
CDY26741	Canola	extracellular	37.89	38.71
GSMUA_Achr8P28170_001	Banana	extracellular	31.58	38.71
CDY16114	Canola	extracellular	36.32	38.55
CDY19232	Canola	extracellular	37.89	38.3
KRH75030	Soybean	extracellular	43.16	38.14
KRG89485	Soybean	extracellular	35.26	38.07
Bra026879.1-P	Field mustard	extracellular	28.42	38.03
CDY33795	Canola	extracellular	35.79	37.99
Bra026880.1-P	Field mustard	extracellular	35.79	37.99
Solyc03g115200.2.1	Tomato	extracellular	37.37	37.97
CDY42854	Canola	extracellular	38.95	37.95
KRH70882	Soybean	extracellular	43.16	37.79
KRH50525	Soybean	extracellular	36.32	37.7
Bra026878.1-P	Field mustard	extracellular	27.89	37.59
Bra029334.1-P	Field mustard	extracellular	38.42	37.44
CDY51213	Canola	extracellular	31.58	37.27
Bra025116.1-P	Field mustard	extracellular	31.58	37.27
AT1G18650.1	Thale cress	extracellular	35.79	36.96
VIT_01s0011g00570.t01	Wine grape	extracellular	37.37	36.79
CDY16115	Canola	extracellular	30.0	36.77
PGSC0003DMT400063348	Potato	extracellular	35.79	36.76
CDY23085	Canola	extracellular, plasma membrane, vacuole	36.84	36.27
TraesCS5D01G403000.1	Wheat	extracellular	31.58	36.14
CDY65418	Canola	cytosol	27.89	36.05
CDY02987	Canola	extracellular	30.53	36.02
CDX87201	Canola	extracellular	37.37	35.68
CDY16822	Canola	extracellular	37.37	35.68
KRH03122	Soybean	extracellular, nucleus	37.89	35.47
CDY34558	Canola	extracellular	32.11	35.47
Bra035941.1-P	Field mustard	extracellular	36.84	35.18
CDX98134	Canola	extracellular	35.26	35.08
CDY02169	Canola	extracellular	35.79	35.05
Bra016724.1-P	Field mustard	extracellular	31.58	34.88
CDX96880	Canola	extracellular	31.58	34.88
PGSC0003DMT400003054	Potato	extracellular	34.74	34.55
AT2G03505.1	Thale cress	extracellular	30.53	34.52
Bra019700.1-P	Field mustard	extracellular	35.79	34.52
Solyc05g012380.2.1	Tomato	extracellular	36.32	34.16
CDY36415	Canola	extracellular	34.74	33.67
PGSC0003DMT400072939	Potato	extracellular	36.32	33.5
CDY04273	Canola	extracellular	38.42	33.49
Solyc01g010310.2.1	Tomato	extracellular	33.16	33.33
AT5G61130.1	Thale cress	extracellular	34.74	32.84
CDY07353	Canola	extracellular	37.37	32.57
Bra004003.1-P	Field mustard	extracellular	37.37	32.57
AT1G69295.1	Thale cress	extracellular	37.89	32.43
KRH56823	Soybean	extracellular	36.32	32.39
CDY40247	Canola	endoplasmic reticulum, extracellular, vacuole	32.63	31.63
Bra012458.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	32.63	31.63
TraesCS7D01G332800.1	Wheat	plasma membrane	29.47	31.46
AT5G08000.2	Thale cress	extracellular	35.26	31.46
CDX69983	Canola	extracellular	34.74	31.13
Bra009313.1-P	Field mustard	extracellular	34.74	31.13
AT1G26450.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	32.11	30.96
GSMUA_Achr4P10810_001	Banana	endoplasmic reticulum, nucleus, plasma membrane	39.47	30.86
CDY65205	Canola	plasma membrane	32.11	30.81
Bra012981.1-P	Field mustard	extracellular, vacuole	35.79	30.63
TraesCS5D01G467200.1	Wheat	extracellular, plasma membrane	28.95	30.22
CDY54140	Canola	extracellular	33.16	30.14
CDY50312	Canola	extracellular	33.16	29.3
CDY40909	Canola	endoplasmic reticulum, extracellular, plasma membrane	36.32	29.11
TraesCS5D01G400600.1	Wheat	endoplasmic reticulum, extracellular, mitochondrion, nucleus	21.05	28.78
CDX99038	Canola	extracellular	34.74	28.09
Bra038314.1-P	Field mustard	mitochondrion	31.58	26.55
AT1G13830.2	Thale cress	mitochondrion, peroxisome, plastid, vacuole	29.47	26.54
TraesCS1D01G428500.1	Wheat	cytosol, mitochondrion, peroxisome	28.95	25.35
TraesCS2D01G253000.1	Wheat	extracellular	21.05	23.12
Solyc04g005420.2.1	Tomato	extracellular, vacuole	32.11	19.87
CDY47016	Canola	extracellular	37.89	19.35
TraesCS7D01G468800.1	Wheat	extracellular	21.05	18.02
TraesCS4D01G132800.1	Wheat	extracellular, plasma membrane, vacuole	25.79	14.85
TraesCS2D01G423000.1	Wheat	extracellular, plasma membrane	25.79	13.76
TraesCS5D01G513400.1	Wheat	extracellular	26.84	12.53
TraesCS5D01G374100.1	Wheat	extracellular, vacuole	22.11	9.63

Protein Annotations

EnsemblPlants:TraesCS6D01G099100.1	EnsemblPlantsGene:TraesCS6D01G099100	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF98	PFAM:PF07983
SEG:seg	SignalP:SignalP-noTM	SMART:SM00768	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr6D:+:62270442..62272056

Molecular Weight (calculated)

18594.7 Da

IEP (calculated)

4.176

GRAVY (calculated)

0.362

Length

190 amino acids

Sequence
(BLAST)

001: MEAALVLVVA VLLGSSALVA SDFCVCRSEQ PTAVLQKAID YACGQGADCT AIAQSGACYS PDEVAAHCSW AANSYFQKFR STGATCDFSG AATLSTTDPS
101: FSGCTFPSSA SAAGTTTGTG TATTGTGTTT GTGTTTGGTF SPGMGTGFNS TGFSPTTGSM DGTAAAAGLL PSIRLAASIA VLLLSYLALP

Best Arabidopsis Sequence Match ( AT5G08000.2 )
(BLAST)

001: MQLLLMICKH LNLSKQDLQI LLASLTILFP FFSSLVGASW CVCKTGLSDS VLQKTLDYAC GNGADCNPTH PKGSCFNPDN VRAHCNYAVN SFFQKKGQAS
101: ESCNFTGTAT LTTTDPSYTG CAFPSSASGS SGSGSTTVTP GKNSPKGSNS ITTFPGGNSP YSGTPSTGLL GGNITDATGT GLNPDYSTES SGFALYYSNN
201: LLLTGFCSLV MML

Arabidopsis Description

E13L3glucan endo-1,3-beta-glucosidase-like protein 3 [Source:TAIR;Acc:AT5G08000]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.